RNA–Protein interactions for RNA: ENST00000470263.5

LINC02008-201, Transcript of long intergenic non-protein coding RNA 2008, humanhuman

TSL 1 (best) BASIC

Gene LINC02008, Length 1,951 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02008-201ENST00000470263 USHBP1Q8N6Y0 703 aa8.66□□□□□ -1.02
LINC02008-201ENST00000470263 RNF39Q9H2S5 420 aa8.66□□□□□ -1.02
LINC02008-201ENST00000470263 KAT6BQ8WYB5 2073 aa8.65□□□□□ -1.02
LINC02008-201ENST00000470263 AMER1Q5JTC6 1135 aaPredicted RBP8.65□□□□□ -1.02
LINC02008-201ENST00000470263 ZNF316A6NFI3 1004 aaPredicted RBP8.64□□□□□ -1.03
LINC02008-201ENST00000470263 EZH2Q15910 746 aaKnown RBP8.64□□□□□ -1.03
LINC02008-201ENST00000470263 SBF2Q86WG5 1849 aa8.64□□□□□ -1.03
LINC02008-201ENST00000470263 BCL9O00512 1426 aa8.64□□□□□ -1.03
LINC02008-201ENST00000470263 PER1O15534 1290 aaPredicted RBP8.64□□□□□ -1.03
LINC02008-201ENST00000470263 PTF1AQ7RTS3 328 aa8.64□□□□□ -1.03
LINC02008-201ENST00000470263 DDX54Q8TDD1 881 aaKnown RBP8.64□□□□□ -1.03
LINC02008-201ENST00000470263 RAPGEF4Q8WZA2 1011 aa8.64□□□□□ -1.03
LINC02008-201ENST00000470263 CAMKK2Q96RR4 588 aa8.64□□□□□ -1.03
LINC02008-201ENST00000470263 BCL11BQ9C0K0 894 aaPredicted RBP8.64□□□□□ -1.03
LINC02008-201ENST00000470263 MEGF6O75095 1541 aa8.64□□□□□ -1.03
LINC02008-201ENST00000470263 CC2D1BQ5T0F9 858 aaKnown RBP8.62□□□□□ -1.03
LINC02008-201ENST00000470263 ZCRB1Q8TBF4 217 aaKnown RBP8.62□□□□□ -1.03
LINC02008-201ENST00000470263 ACSBG1Q96GR2 724 aa8.62□□□□□ -1.03
LINC02008-201ENST00000470263 PARD3Q8TEW0 1356 aa8.62□□□□□ -1.03
LINC02008-201ENST00000470263 KCNQ2O43526 872 aa8.62□□□□□ -1.03
LINC02008-201ENST00000470263 TATP17735 454 aaPredicted RBP8.62□□□□□ -1.03
LINC02008-201ENST00000470263 CNGB1Q14028 1251 aaPredicted RBP8.62□□□□□ -1.03
LINC02008-201ENST00000470263 EIF4A2Q14240 407 aaKnown RBP8.62□□□□□ -1.03
LINC02008-201ENST00000470263 EYA1Q99502 592 aa8.62□□□□□ -1.03
LINC02008-201ENST00000470263 GTF3C3Q9Y5Q9 886 aa8.61□□□□□ -1.03
LINC02008-201ENST00000470263 PLSCR1O15162 318 aa8.61□□□□□ -1.03
LINC02008-201ENST00000470263 PSDA5PKW4 1024 aaPredicted RBP8.6□□□□□ -1.03
LINC02008-201ENST00000470263 SHANK3Q9BYB0 1731 aa8.6□□□□□ -1.03
LINC02008-201ENST00000470263 NCAPD2Q15021 1401 aa8.59□□□□□ -1.03
LINC02008-201ENST00000470263 NHSQ6T4R5 1651 aa8.59□□□□□ -1.03
LINC02008-201ENST00000470263 SYTL4Q96C24 671 aaPredicted RBP8.59□□□□□ -1.03
LINC02008-201ENST00000470263 PCDH11XQ9BZA7 1347 aa8.59□□□□□ -1.03
LINC02008-201ENST00000470263 PCDH11YQ9BZA8 1340 aa8.59□□□□□ -1.03
LINC02008-201ENST00000470263 NPC1L1Q9UHC9 1359 aa8.59□□□□□ -1.03
LINC02008-201ENST00000470263 RREB1Q92766 1687 aa8.59□□□□□ -1.03
LINC02008-201ENST00000470263 MTHFSP49914 203 aa8.59□□□□□ -1.03
LINC02008-201ENST00000470263 CACNB1Q02641 598 aaPredicted RBP8.59□□□□□ -1.03
LINC02008-201ENST00000470263 R3HDM1Q15032 1099 aaKnown RBP8.59□□□□□ -1.03
LINC02008-201ENST00000470263 IGSF1Q8N6C5 1336 aa8.59□□□□□ -1.04
LINC02008-201ENST00000470263 RGPD3A6NKT7 1758 aaPredicted RBP8.58□□□□□ -1.04
LINC02008-201ENST00000470263 RGPD4Q7Z3J3 1758 aa8.58□□□□□ -1.04
LINC02008-201ENST00000470263 PRIM1P49642 420 aaKnown RBP8.58□□□□□ -1.04
LINC02008-201ENST00000470263 NBPF14Q5TI25 921 aa8.58□□□□□ -1.04
LINC02008-201ENST00000470263 PROM2Q8N271 834 aa8.58□□□□□ -1.04
LINC02008-201ENST00000470263 NUP188Q5SRE5 1749 aa8.58□□□□□ -1.04
LINC02008-201ENST00000470263 BTAF1O14981 1849 aa8.57□□□□□ -1.04
LINC02008-201ENST00000470263 CYP27B1O15528 508 aa8.57□□□□□ -1.04
LINC02008-201ENST00000470263 TXNRD1Q16881 649 aa8.57□□□□□ -1.04
LINC02008-201ENST00000470263 SPG7Q9UQ90 795 aa8.57□□□□□ -1.04
LINC02008-201ENST00000470263 DOT1LQ8TEK3 1739 aa8.57□□□□□ -1.04
LINC02008-201ENST00000470263 IL13P35225 146 aa8.57□□□□□ -1.04
LINC02008-201ENST00000470263 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.57□□□□□ -1.04
LINC02008-201ENST00000470263 PKD1L3Q7Z443 1732 aa8.57□□□□□ -1.04
LINC02008-201ENST00000470263 AEBP1Q8IUX7 1158 aa8.56□□□□□ -1.04
LINC02008-201ENST00000470263 SLC4A2P04920 1241 aa8.55□□□□□ -1.04
LINC02008-201ENST00000470263 SULT6B1Q6IMI4 303 aa8.55□□□□□ -1.04
LINC02008-201ENST00000470263 DIAPH1O60610 1272 aaKnown RBP8.55□□□□□ -1.04
LINC02008-201ENST00000470263 MPRIPQ6WCQ1 1025 aa8.55□□□□□ -1.04
LINC02008-201ENST00000470263 IFNL2Q8IZJ0 200 aa8.55□□□□□ -1.04
LINC02008-201ENST00000470263 ANO8Q9HCE9 1232 aaPredicted RBP8.55□□□□□ -1.04
LINC02008-201ENST00000470263 PLEKHG2Q9H7P9 1386 aa8.54□□□□□ -1.04
LINC02008-201ENST00000470263 PHKG2P15735 406 aa8.54□□□□□ -1.04
LINC02008-201ENST00000470263 NKX1-1Q15270 411 aaPredicted RBP8.54□□□□□ -1.04
LINC02008-201ENST00000470263 KDRP35968 1356 aa8.54□□□□□ -1.04
LINC02008-201ENST00000470263 C1QBPQ07021 282 aaKnown RBP8.53□□□□□ -1.04
LINC02008-201ENST00000470263 PLEKHO1Q53GL0 409 aaPredicted RBP8.53□□□□□ -1.04
LINC02008-201ENST00000470263 HMOX1P09601 288 aa8.53□□□□□ -1.04
LINC02008-201ENST00000470263 AMOTQ4VCS5 1084 aa8.53□□□□□ -1.04
LINC02008-201ENST00000470263 SLC27A3Q5K4L6 730 aa8.53□□□□□ -1.04
LINC02008-201ENST00000470263 LRRC4BQ9NT99 713 aa8.53□□□□□ -1.04
LINC02008-201ENST00000470263 STK32BQ9NY57 414 aa8.53□□□□□ -1.04
LINC02008-201ENST00000470263 TOGARAM1Q9Y4F4 1720 aa8.53□□□□□ -1.04
LINC02008-201ENST00000470263 KCNQ4P56696 695 aa8.52□□□□□ -1.05
LINC02008-201ENST00000470263 SLC15A2Q16348 729 aa8.52□□□□□ -1.05
LINC02008-201ENST00000470263 ZNF530Q6P9A1 599 aaPredicted RBP8.52□□□□□ -1.05
LINC02008-201ENST00000470263 ITGB4P16144 1822 aa8.52□□□□□ -1.05
LINC02008-201ENST00000470263 COL3A1P02461 1466 aaPredicted RBP8.52□□□□□ -1.05
LINC02008-201ENST00000470263 U2SURPO15042 1029 aaKnown RBP8.52□□□□□ -1.05
LINC02008-201ENST00000470263 HSP90AB1P08238 724 aaKnown RBP8.52□□□□□ -1.05
LINC02008-201ENST00000470263 PPP2R1AP30153 589 aa8.52□□□□□ -1.05
LINC02008-201ENST00000470263 DDX10Q13206 875 aaKnown RBP8.52□□□□□ -1.05
LINC02008-201ENST00000470263 C1orf141Q5JVX7 400 aa8.52□□□□□ -1.05
LINC02008-201ENST00000470263 PIGBQ92521 554 aa8.52□□□□□ -1.05
LINC02008-201ENST00000470263 CFAP53Q96M91 514 aa8.52□□□□□ -1.05
LINC02008-201ENST00000470263 TMOD3Q9NYL9 352 aa8.52□□□□□ -1.05
LINC02008-201ENST00000470263 CCNL1Q9UK58 526 aaPredicted RBP8.52□□□□□ -1.05
LINC02008-201ENST00000470263 LY75O60449 1722 aa8.51□□□□□ -1.05
LINC02008-201ENST00000470263 PALLDQ8WX93 1383 aa8.51□□□□□ -1.05
LINC02008-201ENST00000470263 DCAF5Q96JK2 942 aa8.5□□□□□ -1.05
LINC02008-201ENST00000470263 YTHDC1Q96MU7 727 aaKnown RBP8.5□□□□□ -1.05
LINC02008-201ENST00000470263 PDGFDQ9GZP0 370 aaPredicted RBP8.5□□□□□ -1.05
LINC02008-201ENST00000470263 U3KPZ7 1027 aaPredicted RBP8.5□□□□□ -1.05
LINC02008-201ENST00000470263 LRP5O75197 1615 aa8.5□□□□□ -1.05
LINC02008-201ENST00000470263 PAPPAQ13219 1627 aa8.5□□□□□ -1.05
LINC02008-201ENST00000470263 ZNF827Q17R98 1081 aa8.5□□□□□ -1.05
LINC02008-201ENST00000470263 SMARCC1Q92922 1105 aaPredicted RBP8.5□□□□□ -1.05
LINC02008-201ENST00000470263 UTRNP46939 3433 aa8.49□□□□□ -1.05
LINC02008-201ENST00000470263 KDM6AO15550 1401 aaPredicted RBP8.49□□□□□ -1.05
LINC02008-201ENST00000470263 ERVV-2B6SEH9 535 aa8.49□□□□□ -1.05
LINC02008-201ENST00000470263 NUDCQ9Y266 331 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms