RNA–Protein interactions for RNA: ENST00000470258.5

NHLRC3-203, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,298 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-203ENST00000470258 UNC13BO14795 1591 aa11.52□□□□□ -0.56
NHLRC3-203ENST00000470258 BRD1O95696 1058 aa11.52□□□□□ -0.57
NHLRC3-203ENST00000470258 CFAP44Q96MT7 982 aa11.52□□□□□ -0.57
NHLRC3-203ENST00000470258 ABCA6Q8N139 1617 aa11.52□□□□□ -0.57
NHLRC3-203ENST00000470258 C16orf45Q96MC5 204 aaPredicted RBP11.52□□□□□ -0.57
NHLRC3-203ENST00000470258 UPF3BQ9BZI7 483 aaKnown RBP11.52□□□□□ -0.57
NHLRC3-203ENST00000470258 SPTLC3Q9NUV7 552 aa11.52□□□□□ -0.57
NHLRC3-203ENST00000470258 NAA30Q147X3 362 aaPredicted RBP11.51□□□□□ -0.57
NHLRC3-203ENST00000470258 IQGAP3Q86VI3 1631 aa11.51□□□□□ -0.57
NHLRC3-203ENST00000470258 ERC2O15083 957 aa11.51□□□□□ -0.57
NHLRC3-203ENST00000470258 TRERF1Q96PN7 1200 aa11.51□□□□□ -0.57
NHLRC3-203ENST00000470258 PLEKHF1Q96S99 279 aa11.51□□□□□ -0.57
NHLRC3-203ENST00000470258 OGFRQ9NZT2 677 aa11.51□□□□□ -0.57
NHLRC3-203ENST00000470258 REREQ9P2R6 1566 aa11.51□□□□□ -0.57
NHLRC3-203ENST00000470258 MAST1Q9Y2H9 1570 aa11.51□□□□□ -0.57
NHLRC3-203ENST00000470258 ZFYVE16Q7Z3T8 1539 aa11.51□□□□□ -0.57
NHLRC3-203ENST00000470258 ATP10AO60312 1499 aa11.51□□□□□ -0.57
NHLRC3-203ENST00000470258 FIBPO43427 364 aa11.5□□□□□ -0.57
NHLRC3-203ENST00000470258 PDIA4P13667 645 aaKnown RBP11.5□□□□□ -0.57
NHLRC3-203ENST00000470258 UVSSAQ2YD98 709 aa11.5□□□□□ -0.57
NHLRC3-203ENST00000470258 GIMAP6Q6P9H5 292 aa11.5□□□□□ -0.57
NHLRC3-203ENST00000470258 DRC7Q8IY82 874 aa11.5□□□□□ -0.57
NHLRC3-203ENST00000470258 ZNF592Q92610 1267 aa11.5□□□□□ -0.57
NHLRC3-203ENST00000470258 KDM4AO75164 1064 aa11.5□□□□□ -0.57
NHLRC3-203ENST00000470258 CCDC183Q5T5S1 534 aa11.5□□□□□ -0.57
NHLRC3-203ENST00000470258 KIAA1524Q8TCG1 905 aa11.5□□□□□ -0.57
NHLRC3-203ENST00000470258 IFT57Q9NWB7 429 aa11.5□□□□□ -0.57
NHLRC3-203ENST00000470258 CNPY2Q9Y2B0 182 aa11.5□□□□□ -0.57
NHLRC3-203ENST00000470258 DIP2CQ9Y2E4 1556 aa11.5□□□□□ -0.57
NHLRC3-203ENST00000470258 DTNBO60941 627 aa11.5□□□□□ -0.57
NHLRC3-203ENST00000470258 TSHZ3Q63HK5 1081 aa11.5□□□□□ -0.57
NHLRC3-203ENST00000470258 ANKRD7Q92527 254 aa11.5□□□□□ -0.57
NHLRC3-203ENST00000470258 CHMP3Q9Y3E7 222 aa11.5□□□□□ -0.57
NHLRC3-203ENST00000470258 TRAPPC8Q9Y2L5 1435 aa11.5□□□□□ -0.57
NHLRC3-203ENST00000470258 NCBP1Q09161 790 aaKnown RBP11.49□□□□□ -0.57
NHLRC3-203ENST00000470258 MRPL50Q8N5N7 158 aaKnown RBP11.49□□□□□ -0.57
NHLRC3-203ENST00000470258 FEZ1Q99689 392 aa11.49□□□□□ -0.57
NHLRC3-203ENST00000470258 KCNF1Q9H3M0 494 aa11.49□□□□□ -0.57
NHLRC3-203ENST00000470258 CABP2Q9NPB3 220 aa11.49□□□□□ -0.57
NHLRC3-203ENST00000470258 MLH3Q9UHC1 1453 aa11.49□□□□□ -0.57
NHLRC3-203ENST00000470258 ANO2Q9NQ90 1003 aa11.49□□□□□ -0.57
NHLRC3-203ENST00000470258 IL16Q14005 1332 aa11.48□□□□□ -0.57
NHLRC3-203ENST00000470258 PTGS1P23219 599 aa11.48□□□□□ -0.57
NHLRC3-203ENST00000470258 IPO4Q8TEX9 1081 aaKnown RBP11.48□□□□□ -0.57
NHLRC3-203ENST00000470258 CHMP4AQ9BY43 222 aa11.48□□□□□ -0.57
NHLRC3-203ENST00000470258 GOLGA6L6A8MZA4 724 aa11.48□□□□□ -0.57
NHLRC3-203ENST00000470258 HMOX1P09601 288 aa11.48□□□□□ -0.57
NHLRC3-203ENST00000470258 NUTM2DQ5VT03 806 aaPredicted RBP11.48□□□□□ -0.57
NHLRC3-203ENST00000470258 LARP6Q9BRS8 491 aaKnown RBP11.48□□□□□ -0.57
NHLRC3-203ENST00000470258 SPAG9O60271 1321 aaKnown RBP11.47□□□□□ -0.57
NHLRC3-203ENST00000470258 ATP7AQ04656 1500 aa11.47□□□□□ -0.57
NHLRC3-203ENST00000470258 VAMP4O75379 141 aa11.47□□□□□ -0.57
NHLRC3-203ENST00000470258 PRKAR2BP31323 418 aa11.47□□□□□ -0.57
NHLRC3-203ENST00000470258 IRX5P78411 483 aaPredicted RBP11.47□□□□□ -0.57
NHLRC3-203ENST00000470258 DCTPP1Q9H773 170 aa11.47□□□□□ -0.57
NHLRC3-203ENST00000470258 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.47□□□□□ -0.57
NHLRC3-203ENST00000470258 PALD1Q9ULE6 856 aa11.47□□□□□ -0.57
NHLRC3-203ENST00000470258 V9GYY5 206 aaPredicted RBP11.47□□□□□ -0.57
NHLRC3-203ENST00000470258 DUOX2Q9NRD8 1548 aa11.47□□□□□ -0.57
NHLRC3-203ENST00000470258 DIAPH1O60610 1272 aaKnown RBP11.47□□□□□ -0.57
NHLRC3-203ENST00000470258 AP5Z1O43299 807 aa11.47□□□□□ -0.57
NHLRC3-203ENST00000470258 MX1P20591 662 aa11.47□□□□□ -0.57
NHLRC3-203ENST00000470258 MCCP23508 829 aa11.47□□□□□ -0.57
NHLRC3-203ENST00000470258 WDR33Q9C0J8 1336 aaKnown RBP11.46□□□□□ -0.57
NHLRC3-203ENST00000470258 TWISTNBQ3B726 338 aaPredicted RBP11.46□□□□□ -0.57
NHLRC3-203ENST00000470258 SRCIN1Q9C0H9 1055 aa11.46□□□□□ -0.57
NHLRC3-203ENST00000470258 CCDC66A2RUB6 948 aa11.46□□□□□ -0.58
NHLRC3-203ENST00000470258 TRIM6-TRIM34B2RNG4 842 aa11.46□□□□□ -0.58
NHLRC3-203ENST00000470258 RAPGEF3O95398 923 aa11.46□□□□□ -0.58
NHLRC3-203ENST00000470258 LRMPQ12912 555 aa11.46□□□□□ -0.58
NHLRC3-203ENST00000470258 RILPL2Q969X0 211 aa11.46□□□□□ -0.58
NHLRC3-203ENST00000470258 CTNNA3Q9UI47 895 aa11.46□□□□□ -0.58
NHLRC3-203ENST00000470258 ANKRD36BQ8N2N9 1353 aa11.45□□□□□ -0.58
NHLRC3-203ENST00000470258 NPHP1O15259 732 aa11.45□□□□□ -0.58
NHLRC3-203ENST00000470258 GABPB1Q06547 395 aaPredicted RBP11.45□□□□□ -0.58
NHLRC3-203ENST00000470258 CCDC112Q8NEF3 446 aa11.45□□□□□ -0.58
NHLRC3-203ENST00000470258 KIF3BO15066 747 aa11.45□□□□□ -0.58
NHLRC3-203ENST00000470258 TNNT1P13805 278 aa11.45□□□□□ -0.58
NHLRC3-203ENST00000470258 FBLN1P23142 703 aa11.45□□□□□ -0.58
NHLRC3-203ENST00000470258 SRPK2P78362 688 aaKnown RBP11.45□□□□□ -0.58
NHLRC3-203ENST00000470258 API5Q9BZZ5 524 aaKnown RBP11.45□□□□□ -0.58
NHLRC3-203ENST00000470258 YEATS2Q9ULM3 1422 aa11.45□□□□□ -0.58
NHLRC3-203ENST00000470258 SPHKAPQ2M3C7 1700 aa11.45□□□□□ -0.58
NHLRC3-203ENST00000470258 CTIFO43310 598 aaKnown RBP11.45□□□□□ -0.58
NHLRC3-203ENST00000470258 MCM2P49736 904 aa11.45□□□□□ -0.58
NHLRC3-203ENST00000470258 SLFN14P0C7P3 912 aa11.44□□□□□ -0.58
NHLRC3-203ENST00000470258 NCBP3Q53F19 620 aaKnown RBP11.44□□□□□ -0.58
NHLRC3-203ENST00000470258 AFAP1Q8N556 730 aa11.44□□□□□ -0.58
NHLRC3-203ENST00000470258 MED14O60244 1454 aa11.44□□□□□ -0.58
NHLRC3-203ENST00000470258 CCDC186Q7Z3E2 898 aa11.44□□□□□ -0.58
NHLRC3-203ENST00000470258 TIGD1Q96MW7 591 aa11.44□□□□□ -0.58
NHLRC3-203ENST00000470258 TPD52L1Q16890 204 aaPredicted RBP11.43□□□□□ -0.58
NHLRC3-203ENST00000470258 ARHGAP45Q92619 1136 aa11.43□□□□□ -0.58
NHLRC3-203ENST00000470258 ABCC4O15439 1325 aa11.43□□□□□ -0.58
NHLRC3-203ENST00000470258 CLTCL1P53675 1640 aa11.43□□□□□ -0.58
NHLRC3-203ENST00000470258 KRT24Q2M2I5 525 aa11.43□□□□□ -0.58
NHLRC3-203ENST00000470258 C8orf58Q8NAV2 365 aa11.43□□□□□ -0.58
NHLRC3-203ENST00000470258 RTF1Q92541 710 aaKnown RBP11.43□□□□□ -0.58
NHLRC3-203ENST00000470258 MBIPQ9NS73 344 aa11.43□□□□□ -0.58
NHLRC3-203ENST00000470258 DDX41Q9UJV9 622 aaKnown RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms