RNA–Protein interactions for RNA: ENST00000470151.5

RNF13-211, Transcript of ring finger protein 13, humanhuman

TSL 3

Gene RNF13, Length 701 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13-211ENST00000470151 TOGARAM1Q9Y4F4 1720 aa13.36□□□□□ -0.27
RNF13-211ENST00000470151 PRIM1P49642 420 aaKnown RBP13.35□□□□□ -0.27
RNF13-211ENST00000470151 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.35□□□□□ -0.27
RNF13-211ENST00000470151 UBR3Q6ZT12 1888 aa13.34□□□□□ -0.27
RNF13-211ENST00000470151 DDX54Q8TDD1 881 aaKnown RBP13.34□□□□□ -0.27
RNF13-211ENST00000470151 L3MBTL2Q969R5 705 aa13.34□□□□□ -0.27
RNF13-211ENST00000470151 MEGF6O75095 1541 aa13.34□□□□□ -0.27
RNF13-211ENST00000470151 IP6K1Q92551 441 aa13.33□□□□□ -0.28
RNF13-211ENST00000470151 EDC4Q6P2E9 1401 aaKnown RBP13.32□□□□□ -0.28
RNF13-211ENST00000470151 GPBP1L1Q9HC44 474 aaPredicted RBP13.32□□□□□ -0.28
RNF13-211ENST00000470151 CCNL1Q9UK58 526 aaPredicted RBP13.32□□□□□ -0.28
RNF13-211ENST00000470151 CD2APQ9Y5K6 639 aa13.32□□□□□ -0.28
RNF13-211ENST00000470151 ITGB4P16144 1822 aa13.32□□□□□ -0.28
RNF13-211ENST00000470151 MSL1Q68DK7 614 aa13.31□□□□□ -0.28
RNF13-211ENST00000470151 PCNTO95613 3336 aa13.31□□□□□ -0.28
RNF13-211ENST00000470151 CICQ96RK0 1608 aaPredicted RBP13.31□□□□□ -0.28
RNF13-211ENST00000470151 SYTL4Q96C24 671 aaPredicted RBP13.3□□□□□ -0.28
RNF13-211ENST00000470151 ROCK2O75116 1388 aaKnown RBP13.3□□□□□ -0.28
RNF13-211ENST00000470151 MAP2P11137 1827 aaKnown RBP13.29□□□□□ -0.28
RNF13-211ENST00000470151 KIF3CO14782 793 aa13.29□□□□□ -0.28
RNF13-211ENST00000470151 AMIGO3Q86WK7 504 aa13.29□□□□□ -0.28
RNF13-211ENST00000470151 C4BP0C0L5 1744 aa13.29□□□□□ -0.28
RNF13-211ENST00000470151 KIAA1551Q9HCM1 1747 aa13.29□□□□□ -0.28
RNF13-211ENST00000470151 A0A1W2PP64 1363 aa13.29□□□□□ -0.28
RNF13-211ENST00000470151 KIF13BQ9NQT8 1826 aa13.28□□□□□ -0.28
RNF13-211ENST00000470151 ZCRB1Q8TBF4 217 aaKnown RBP13.28□□□□□ -0.28
RNF13-211ENST00000470151 SLC12A5Q9H2X9 1139 aa13.28□□□□□ -0.28
RNF13-211ENST00000470151 ZNF526Q8TF50 670 aaPredicted RBP13.27□□□□□ -0.29
RNF13-211ENST00000470151 LTV1Q96GA3 475 aaPredicted RBP13.27□□□□□ -0.29
RNF13-211ENST00000470151 MAP3K19Q56UN5 1328 aa13.27□□□□□ -0.29
RNF13-211ENST00000470151 USP47Q96K76 1375 aa13.27□□□□□ -0.29
RNF13-211ENST00000470151 MSH5O43196 834 aa13.26□□□□□ -0.29
RNF13-211ENST00000470151 HOXC9P31274 260 aa13.26□□□□□ -0.29
RNF13-211ENST00000470151 DNAJC5GQ8N7S2 189 aa13.26□□□□□ -0.29
RNF13-211ENST00000470151 FBLN1P23142 703 aa13.25□□□□□ -0.29
RNF13-211ENST00000470151 BRCA1P38398 1863 aaKnown RBP13.25□□□□□ -0.29
RNF13-211ENST00000470151 IGSF1Q8N6C5 1336 aa13.24□□□□□ -0.29
RNF13-211ENST00000470151 HDGFL2Q7Z4V5 671 aaPredicted RBP13.24□□□□□ -0.29
RNF13-211ENST00000470151 NBPF6Q5VWK0 638 aa13.23□□□□□ -0.29
RNF13-211ENST00000470151 FLAD1Q8NFF5 587 aa13.23□□□□□ -0.29
RNF13-211ENST00000470151 TMC1Q8TDI8 760 aa13.23□□□□□ -0.29
RNF13-211ENST00000470151 NBPF4Q96M43 638 aa13.23□□□□□ -0.29
RNF13-211ENST00000470151 SIN3AQ96ST3 1273 aa13.23□□□□□ -0.29
RNF13-211ENST00000470151 N4BP2Q86UW6 1770 aaPredicted RBP13.22□□□□□ -0.29
RNF13-211ENST00000470151 PKD1L3Q7Z443 1732 aa13.22□□□□□ -0.29
RNF13-211ENST00000470151 WDR90Q96KV7 1748 aa13.22□□□□□ -0.29
RNF13-211ENST00000470151 PALLDQ8WX93 1383 aa13.22□□□□□ -0.29
RNF13-211ENST00000470151 SMIM5Q71RC9 77 aa13.22□□□□□ -0.29
RNF13-211ENST00000470151 RTL1A6NKG5 1358 aa13.21□□□□□ -0.29
RNF13-211ENST00000470151 CGNL1Q0VF96 1302 aa13.21□□□□□ -0.29
RNF13-211ENST00000470151 PUS7Q96PZ0 661 aaKnown RBP13.21□□□□□ -0.29
RNF13-211ENST00000470151 TERF2IPQ9NYB0 399 aa13.21□□□□□ -0.29
RNF13-211ENST00000470151 WWC3Q9ULE0 1092 aa13.21□□□□□ -0.29
RNF13-211ENST00000470151 APLP1P51693 650 aa13.2□□□□□ -0.3
RNF13-211ENST00000470151 USHBP1Q8N6Y0 703 aa13.2□□□□□ -0.3
RNF13-211ENST00000470151 PXDNLA1KZ92 1463 aa13.19□□□□□ -0.3
RNF13-211ENST00000470151 CYP27B1O15528 508 aa13.19□□□□□ -0.3
RNF13-211ENST00000470151 ARFGEF1Q9Y6D6 1849 aa13.18□□□□□ -0.3
RNF13-211ENST00000470151 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.18□□□□□ -0.3
RNF13-211ENST00000470151 AMPHP49418 695 aa13.18□□□□□ -0.3
RNF13-211ENST00000470151 TOMM70O94826 608 aa13.17□□□□□ -0.3
RNF13-211ENST00000470151 COG3Q96JB2 828 aa13.17□□□□□ -0.3
RNF13-211ENST00000470151 SBF1O95248 1867 aa13.16□□□□□ -0.3
RNF13-211ENST00000470151 PCDH11XQ9BZA7 1347 aa13.16□□□□□ -0.3
RNF13-211ENST00000470151 PCDH11YQ9BZA8 1340 aa13.16□□□□□ -0.3
RNF13-211ENST00000470151 NCAPD2Q15021 1401 aa13.16□□□□□ -0.3
RNF13-211ENST00000470151 RRS1Q15050 365 aaKnown RBP13.16□□□□□ -0.3
RNF13-211ENST00000470151 MPRIPQ6WCQ1 1025 aa13.16□□□□□ -0.3
RNF13-211ENST00000470151 AK7Q96M32 723 aa13.16□□□□□ -0.3
RNF13-211ENST00000470151 TESK2Q96S53 571 aa13.16□□□□□ -0.3
RNF13-211ENST00000470151 MYH14Q7Z406 1995 aaKnown RBP13.16□□□□□ -0.3
RNF13-211ENST00000470151 NSD3Q9BZ95 1437 aa13.15□□□□□ -0.3
RNF13-211ENST00000470151 PHF14O94880 888 aa13.15□□□□□ -0.3
RNF13-211ENST00000470151 HMGB2P26583 209 aaKnown RBP13.15□□□□□ -0.3
RNF13-211ENST00000470151 SSFA2P28290 1259 aa13.15□□□□□ -0.3
RNF13-211ENST00000470151 LINC00116Q8NCU8 138 aa13.15□□□□□ -0.3
RNF13-211ENST00000470151 RAPGEF4Q8WZA2 1011 aa13.15□□□□□ -0.3
RNF13-211ENST00000470151 PIGBQ92521 554 aa13.15□□□□□ -0.3
RNF13-211ENST00000470151 CARD11Q9BXL7 1154 aa13.15□□□□□ -0.3
RNF13-211ENST00000470151 NMRK2Q9NPI5 230 aa13.15□□□□□ -0.3
RNF13-211ENST00000470151 C10orf71Q711Q0 1435 aa13.14□□□□□ -0.31
RNF13-211ENST00000470151 KIF20BQ96Q89 1820 aa13.14□□□□□ -0.31
RNF13-211ENST00000470151 TATP17735 454 aaPredicted RBP13.14□□□□□ -0.31
RNF13-211ENST00000470151 COL13A1Q5TAT6 717 aaPredicted RBP13.14□□□□□ -0.31
RNF13-211ENST00000470151 JMYQ8N9B5 988 aa13.14□□□□□ -0.31
RNF13-211ENST00000470151 SMARCC1Q92922 1105 aaPredicted RBP13.14□□□□□ -0.31
RNF13-211ENST00000470151 INSRP06213 1382 aa13.14□□□□□ -0.31
RNF13-211ENST00000470151 ANKRD26Q9UPS8 1709 aa13.13□□□□□ -0.31
RNF13-211ENST00000470151 ZNF831Q5JPB2 1677 aa13.13□□□□□ -0.31
RNF13-211ENST00000470151 FYB1O15117 783 aa13.13□□□□□ -0.31
RNF13-211ENST00000470151 ITPK1Q13572 414 aa13.13□□□□□ -0.31
RNF13-211ENST00000470151 NKX1-1Q15270 411 aaPredicted RBP13.13□□□□□ -0.31
RNF13-211ENST00000470151 HSP90AB2PQ58FF8 381 aa13.13□□□□□ -0.31
RNF13-211ENST00000470151 COL5A3P25940 1745 aaPredicted RBP13.13□□□□□ -0.31
RNF13-211ENST00000470151 LOC102724428A0A0B4J2F2 783 aa13.12□□□□□ -0.31
RNF13-211ENST00000470151 SIK1P57059 783 aa13.12□□□□□ -0.31
RNF13-211ENST00000470151 NEUROD1Q13562 356 aa13.12□□□□□ -0.31
RNF13-211ENST00000470151 C4AP0C0L4 1744 aa13.12□□□□□ -0.31
RNF13-211ENST00000470151 SMG6Q86US8 1419 aaKnown RBP13.12□□□□□ -0.31
RNF13-211ENST00000470151 MMP10P09238 476 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms