RNA–Protein interactions for RNA: ENST00000469757.1

TRAPPC3-206, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 221 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-206ENST00000469757 IL13P35225 146 aa11.25□□□□□ -0.61
TRAPPC3-206ENST00000469757 MTHFSP49914 203 aa11.25□□□□□ -0.61
TRAPPC3-206ENST00000469757 BTAF1O14981 1849 aa11.25□□□□□ -0.61
TRAPPC3-206ENST00000469757 USHBP1Q8N6Y0 703 aa11.24□□□□□ -0.61
TRAPPC3-206ENST00000469757 RAPGEF4Q8WZA2 1011 aa11.24□□□□□ -0.61
TRAPPC3-206ENST00000469757 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.24□□□□□ -0.61
TRAPPC3-206ENST00000469757 PCDH11XQ9BZA7 1347 aa11.24□□□□□ -0.61
TRAPPC3-206ENST00000469757 PCDH11YQ9BZA8 1340 aa11.24□□□□□ -0.61
TRAPPC3-206ENST00000469757 EXOC5O00471 708 aa11.23□□□□□ -0.61
TRAPPC3-206ENST00000469757 PPP2R1AP30153 589 aa11.23□□□□□ -0.61
TRAPPC3-206ENST00000469757 FAM182BQ5T319 152 aa11.23□□□□□ -0.61
TRAPPC3-206ENST00000469757 PAPPAQ13219 1627 aa11.23□□□□□ -0.61
TRAPPC3-206ENST00000469757 TATP17735 454 aaPredicted RBP11.22□□□□□ -0.61
TRAPPC3-206ENST00000469757 MRC1P22897 1456 aa11.22□□□□□ -0.61
TRAPPC3-206ENST00000469757 LY75O60449 1722 aa11.21□□□□□ -0.61
TRAPPC3-206ENST00000469757 ZNF316A6NFI3 1004 aaPredicted RBP11.21□□□□□ -0.61
TRAPPC3-206ENST00000469757 DDX10Q13206 875 aaKnown RBP11.21□□□□□ -0.61
TRAPPC3-206ENST00000469757 RALBP1Q15311 655 aa11.21□□□□□ -0.61
TRAPPC3-206ENST00000469757 ZCRB1Q8TBF4 217 aaKnown RBP11.21□□□□□ -0.61
TRAPPC3-206ENST00000469757 CICQ96RK0 1608 aaPredicted RBP11.2□□□□□ -0.62
TRAPPC3-206ENST00000469757 DIAPH1O60610 1272 aaKnown RBP11.2□□□□□ -0.62
TRAPPC3-206ENST00000469757 ITGB4P16144 1822 aa11.2□□□□□ -0.62
TRAPPC3-206ENST00000469757 SCN11AQ9UI33 1791 aa11.19□□□□□ -0.62
TRAPPC3-206ENST00000469757 MYBBP1AQ9BQG0 1328 aaKnown RBP11.19□□□□□ -0.62
TRAPPC3-206ENST00000469757 CYP27B1O15528 508 aa11.19□□□□□ -0.62
TRAPPC3-206ENST00000469757 NKX1-1Q15270 411 aaPredicted RBP11.19□□□□□ -0.62
TRAPPC3-206ENST00000469757 AEBP1Q8IUX7 1158 aa11.19□□□□□ -0.62
TRAPPC3-206ENST00000469757 BCL11BQ9C0K0 894 aaPredicted RBP11.19□□□□□ -0.62
TRAPPC3-206ENST00000469757 ZNF831Q5JPB2 1677 aa11.19□□□□□ -0.62
TRAPPC3-206ENST00000469757 KDM6AO15550 1401 aaPredicted RBP11.18□□□□□ -0.62
TRAPPC3-206ENST00000469757 TRIM37O94972 964 aa11.18□□□□□ -0.62
TRAPPC3-206ENST00000469757 BAG6P46379 1132 aa11.18□□□□□ -0.62
TRAPPC3-206ENST00000469757 SF3B2Q13435 895 aaKnown RBP11.18□□□□□ -0.62
TRAPPC3-206ENST00000469757 CFAP53Q96M91 514 aa11.18□□□□□ -0.62
TRAPPC3-206ENST00000469757 SPG7Q9UQ90 795 aa11.18□□□□□ -0.62
TRAPPC3-206ENST00000469757 SULT6B1Q6IMI4 303 aa11.17□□□□□ -0.62
TRAPPC3-206ENST00000469757 VIRMAQ69YN4 1812 aaKnown RBP11.16□□□□□ -0.62
TRAPPC3-206ENST00000469757 SIPA1L3O60292 1781 aaPredicted RBP11.16□□□□□ -0.62
TRAPPC3-206ENST00000469757 QSER1Q2KHR3 1735 aa11.16□□□□□ -0.62
TRAPPC3-206ENST00000469757 PLSCR1O15162 318 aa11.16□□□□□ -0.62
TRAPPC3-206ENST00000469757 PHKG2P15735 406 aa11.16□□□□□ -0.62
TRAPPC3-206ENST00000469757 AMOTQ4VCS5 1084 aa11.16□□□□□ -0.62
TRAPPC3-206ENST00000469757 PTF1AQ7RTS3 328 aa11.16□□□□□ -0.62
TRAPPC3-206ENST00000469757 DEFB132Q7Z7B7 95 aa11.16□□□□□ -0.62
TRAPPC3-206ENST00000469757 CAMKK2Q96RR4 588 aa11.16□□□□□ -0.62
TRAPPC3-206ENST00000469757 PRKRIP1Q9H875 184 aaPredicted RBP11.16□□□□□ -0.62
TRAPPC3-206ENST00000469757 DDX54Q8TDD1 881 aaKnown RBP11.15□□□□□ -0.62
TRAPPC3-206ENST00000469757 C5P01031 1676 aa11.14□□□□□ -0.63
TRAPPC3-206ENST00000469757 KCNQ2O43526 872 aa11.14□□□□□ -0.63
TRAPPC3-206ENST00000469757 PLEKHO1Q53GL0 409 aaPredicted RBP11.14□□□□□ -0.63
TRAPPC3-206ENST00000469757 IFNL2Q8IZJ0 200 aa11.14□□□□□ -0.63
TRAPPC3-206ENST00000469757 RSPH6AQ9H0K4 717 aa11.14□□□□□ -0.63
TRAPPC3-206ENST00000469757 CASZ1Q86V15 1759 aa11.13□□□□□ -0.63
TRAPPC3-206ENST00000469757 UBR2Q8IWV8 1755 aa11.13□□□□□ -0.63
TRAPPC3-206ENST00000469757 APBA3O96018 575 aa11.13□□□□□ -0.63
TRAPPC3-206ENST00000469757 CNGB1Q14028 1251 aaPredicted RBP11.13□□□□□ -0.63
TRAPPC3-206ENST00000469757 LRP5O75197 1615 aa11.13□□□□□ -0.63
TRAPPC3-206ENST00000469757 TAF1LQ8IZX4 1826 aa11.12□□□□□ -0.63
TRAPPC3-206ENST00000469757 HSP90AB1P08238 724 aaKnown RBP11.12□□□□□ -0.63
TRAPPC3-206ENST00000469757 HMOX1P09601 288 aa11.12□□□□□ -0.63
TRAPPC3-206ENST00000469757 EN1Q05925 392 aaPredicted RBP11.12□□□□□ -0.63
TRAPPC3-206ENST00000469757 ZNF530Q6P9A1 599 aaPredicted RBP11.12□□□□□ -0.63
TRAPPC3-206ENST00000469757 DCAF5Q96JK2 942 aa11.12□□□□□ -0.63
TRAPPC3-206ENST00000469757 NUDCQ9Y266 331 aa11.12□□□□□ -0.63
TRAPPC3-206ENST00000469757 MAP3K5Q99683 1374 aa11.12□□□□□ -0.63
TRAPPC3-206ENST00000469757 COL5A3P25940 1745 aaPredicted RBP11.12□□□□□ -0.63
TRAPPC3-206ENST00000469757 U2SURPO15042 1029 aaKnown RBP11.11□□□□□ -0.63
TRAPPC3-206ENST00000469757 EZH2Q15910 746 aaKnown RBP11.11□□□□□ -0.63
TRAPPC3-206ENST00000469757 ACSBG1Q96GR2 724 aa11.11□□□□□ -0.63
TRAPPC3-206ENST00000469757 CEMIPQ8WUJ3 1361 aa11.11□□□□□ -0.63
TRAPPC3-206ENST00000469757 TUBGCP6Q96RT7 1819 aa11.11□□□□□ -0.63
TRAPPC3-206ENST00000469757 FCHSD2O94868 740 aa11.1□□□□□ -0.63
TRAPPC3-206ENST00000469757 PRIM1P49642 420 aaKnown RBP11.1□□□□□ -0.63
TRAPPC3-206ENST00000469757 AKAP4Q5JQC9 854 aa11.1□□□□□ -0.63
TRAPPC3-206ENST00000469757 PALLDQ8WX93 1383 aa11.1□□□□□ -0.63
TRAPPC3-206ENST00000469757 KCPQ6ZWJ8 1503 aa11.09□□□□□ -0.63
TRAPPC3-206ENST00000469757 TJP1Q07157 1748 aa11.09□□□□□ -0.63
TRAPPC3-206ENST00000469757 DLG5Q8TDM6 1919 aa11.09□□□□□ -0.63
TRAPPC3-206ENST00000469757 ERVV-2B6SEH9 535 aa11.09□□□□□ -0.63
TRAPPC3-206ENST00000469757 U2AF1L5P0DN76 240 aaPredicted RBP11.09□□□□□ -0.63
TRAPPC3-206ENST00000469757 PRKAR2BP31323 418 aa11.09□□□□□ -0.63
TRAPPC3-206ENST00000469757 U2AF1Q01081 240 aaKnown RBP eCLIP11.09□□□□□ -0.63
TRAPPC3-206ENST00000469757 MTHFSDQ2M296 383 aaKnown RBP11.09□□□□□ -0.63
TRAPPC3-206ENST00000469757 C1orf141Q5JVX7 400 aa11.09□□□□□ -0.63
TRAPPC3-206ENST00000469757 SLC27A3Q5K4L6 730 aa11.09□□□□□ -0.63
TRAPPC3-206ENST00000469757 PROM2Q8N271 834 aa11.09□□□□□ -0.63
TRAPPC3-206ENST00000469757 GAS2L2Q8NHY3 880 aa11.09□□□□□ -0.63
TRAPPC3-206ENST00000469757 PIGBQ92521 554 aa11.08□□□□□ -0.64
TRAPPC3-206ENST00000469757 PLEKHF1Q96S99 279 aa11.08□□□□□ -0.64
TRAPPC3-206ENST00000469757 C4BP0C0L5 1744 aa11.08□□□□□ -0.64
TRAPPC3-206ENST00000469757 COL24A1Q17RW2 1714 aa11.08□□□□□ -0.64
TRAPPC3-206ENST00000469757 TXNRD1Q16881 649 aa11.07□□□□□ -0.64
TRAPPC3-206ENST00000469757 PHACTR3Q96KR7 559 aa11.07□□□□□ -0.64
TRAPPC3-206ENST00000469757 ANO8Q9HCE9 1232 aaPredicted RBP11.07□□□□□ -0.64
TRAPPC3-206ENST00000469757 TMOD3Q9NYL9 352 aa11.07□□□□□ -0.64
TRAPPC3-206ENST00000469757 KDM3BQ7LBC6 1761 aa11.06□□□□□ -0.64
TRAPPC3-206ENST00000469757 SMARCC1Q92922 1105 aaPredicted RBP11.06□□□□□ -0.64
TRAPPC3-206ENST00000469757 SYTL4Q96C24 671 aaPredicted RBP11.06□□□□□ -0.64
TRAPPC3-206ENST00000469757 UBR3Q6ZT12 1888 aa11.06□□□□□ -0.64
TRAPPC3-206ENST00000469757 MPRIPQ6WCQ1 1025 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms