RNA–Protein interactions for RNA: ENST00000469687.2

CBWD3-205, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,195 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-205ENST00000469687 FLT4P35916 1363 aa18.43■□□□□ 0.54
CBWD3-205ENST00000469687 GSE1Q14687 1217 aa18.43■□□□□ 0.54
CBWD3-205ENST00000469687 CHMP4BQ9H444 224 aaKnown RBP18.43■□□□□ 0.54
CBWD3-205ENST00000469687 SBNO1A3KN83 1393 aa18.43■□□□□ 0.54
CBWD3-205ENST00000469687 MARF1Q9Y4F3 1742 aaKnown RBP18.42■□□□□ 0.54
CBWD3-205ENST00000469687 EYA1Q99502 592 aa18.42■□□□□ 0.54
CBWD3-205ENST00000469687 AMPHP49418 695 aa18.41■□□□□ 0.54
CBWD3-205ENST00000469687 BMP2KLQ5H9B9 411 aa18.4■□□□□ 0.54
CBWD3-205ENST00000469687 KIAA0232Q92628 1395 aa18.4■□□□□ 0.54
CBWD3-205ENST00000469687 NLRP6P59044 892 aa18.4■□□□□ 0.54
CBWD3-205ENST00000469687 INTS3Q68E01 1043 aaKnown RBP18.4■□□□□ 0.54
CBWD3-205ENST00000469687 KDRP35968 1356 aa18.39■□□□□ 0.54
CBWD3-205ENST00000469687 MSH6P52701 1360 aa18.39■□□□□ 0.53
CBWD3-205ENST00000469687 IGSF1Q8N6C5 1336 aa18.38■□□□□ 0.53
CBWD3-205ENST00000469687 ATP10DQ9P241 1426 aa18.38■□□□□ 0.53
CBWD3-205ENST00000469687 KIF24Q5T7B8 1368 aa18.37■□□□□ 0.53
CBWD3-205ENST00000469687 SLC4A2P04920 1241 aa18.37■□□□□ 0.53
CBWD3-205ENST00000469687 RBM33Q96EV2 1170 aaKnown RBP18.37■□□□□ 0.53
CBWD3-205ENST00000469687 TSPYL4Q9UJ04 414 aa18.37■□□□□ 0.53
CBWD3-205ENST00000469687 G2E3Q7L622 706 aa18.36■□□□□ 0.53
CBWD3-205ENST00000469687 RTF1Q92541 710 aaKnown RBP18.36■□□□□ 0.53
CBWD3-205ENST00000469687 MEIS3Q99687 375 aa18.35■□□□□ 0.53
CBWD3-205ENST00000469687 HOXC9P31274 260 aa18.35■□□□□ 0.53
CBWD3-205ENST00000469687 RBM25P49756 843 aaKnown RBP18.35■□□□□ 0.53
CBWD3-205ENST00000469687 TBC1D9Q6ZT07 1266 aa18.35■□□□□ 0.53
CBWD3-205ENST00000469687 DCTPP1Q9H773 170 aa18.35■□□□□ 0.53
CBWD3-205ENST00000469687 C16orf71Q8IYS4 520 aaPredicted RBP18.34■□□□□ 0.53
CBWD3-205ENST00000469687 ANKARQ7Z5J8 1434 aa18.34■□□□□ 0.53
CBWD3-205ENST00000469687 GSPT1P15170 499 aaKnown RBP18.34■□□□□ 0.53
CBWD3-205ENST00000469687 HAP1P54257 671 aaPredicted RBP18.34■□□□□ 0.53
CBWD3-205ENST00000469687 NWD1Q149M9 1564 aa18.34■□□□□ 0.53
CBWD3-205ENST00000469687 CEP85Q6P2H3 762 aa18.34■□□□□ 0.53
CBWD3-205ENST00000469687 LTV1Q96GA3 475 aaPredicted RBP18.34■□□□□ 0.53
CBWD3-205ENST00000469687 RTL1A6NKG5 1358 aa18.33■□□□□ 0.53
CBWD3-205ENST00000469687 PTPRCP08575 1304 aa18.33■□□□□ 0.53
CBWD3-205ENST00000469687 SETD1BQ9UPS6 1966 aaKnown RBP18.33■□□□□ 0.53
CBWD3-205ENST00000469687 F6X3S4 739 aa18.33■□□□□ 0.52
CBWD3-205ENST00000469687 ANKRD44Q8N8A2 993 aa18.33■□□□□ 0.52
CBWD3-205ENST00000469687 ABTB2Q8N961 1025 aa18.33■□□□□ 0.52
CBWD3-205ENST00000469687 PLEKHM2Q8IWE5 1019 aa18.32■□□□□ 0.52
CBWD3-205ENST00000469687 GAS2L2Q8NHY3 880 aa18.32■□□□□ 0.52
CBWD3-205ENST00000469687 OTUD7AQ8TE49 926 aaPredicted RBP18.32■□□□□ 0.52
CBWD3-205ENST00000469687 KIF2CQ99661 725 aa18.31■□□□□ 0.52
CBWD3-205ENST00000469687 LRRC37A3O60309 1634 aa18.31■□□□□ 0.52
CBWD3-205ENST00000469687 APBB1O00213 710 aa18.31■□□□□ 0.52
CBWD3-205ENST00000469687 SLC4A10Q6U841 1118 aa18.31■□□□□ 0.52
CBWD3-205ENST00000469687 C14orf37Q86TY3 774 aa18.31■□□□□ 0.52
CBWD3-205ENST00000469687 IL27Q8NEV9 243 aa18.31■□□□□ 0.52
CBWD3-205ENST00000469687 USHBP1Q8N6Y0 703 aa18.3■□□□□ 0.52
CBWD3-205ENST00000469687 LTN1O94822 1766 aa18.3■□□□□ 0.52
CBWD3-205ENST00000469687 SMARCA5O60264 1052 aaPredicted RBP18.3■□□□□ 0.52
CBWD3-205ENST00000469687 TRHP20396 242 aaPredicted RBP18.3■□□□□ 0.52
CBWD3-205ENST00000469687 HSCBQ8IWL3 235 aa18.3■□□□□ 0.52
CBWD3-205ENST00000469687 USP54Q70EL1 1684 aa18.29■□□□□ 0.52
CBWD3-205ENST00000469687 CHD2O14647 1828 aaKnown RBP18.29■□□□□ 0.52
CBWD3-205ENST00000469687 NECTIN2Q92692 538 aa18.29■□□□□ 0.52
CBWD3-205ENST00000469687 RPAP2Q8IXW5 612 aaPredicted RBP18.28■□□□□ 0.52
CBWD3-205ENST00000469687 GNAT3A8MTJ3 354 aa18.28■□□□□ 0.52
CBWD3-205ENST00000469687 IL17REQ8NFR9 667 aa18.28■□□□□ 0.52
CBWD3-205ENST00000469687 FAM208AQ9UK61 1670 aaKnown RBP18.28■□□□□ 0.52
CBWD3-205ENST00000469687 CD2BP2O95400 341 aaKnown RBP18.27■□□□□ 0.52
CBWD3-205ENST00000469687 TTC22Q5TAA0 569 aa18.27■□□□□ 0.51
CBWD3-205ENST00000469687 PHF8Q9UPP1 1060 aa18.27■□□□□ 0.51
CBWD3-205ENST00000469687 CDC45O75419 566 aa18.26■□□□□ 0.51
CBWD3-205ENST00000469687 RBM42Q9BTD8 480 aaKnown RBP18.26■□□□□ 0.51
CBWD3-205ENST00000469687 BRPF3Q9ULD4 1205 aa18.25■□□□□ 0.51
CBWD3-205ENST00000469687 NCOA3Q9Y6Q9 1424 aa18.25■□□□□ 0.51
CBWD3-205ENST00000469687 SNX21Q969T3 373 aa18.25■□□□□ 0.51
CBWD3-205ENST00000469687 CHMP5Q9NZZ3 219 aa18.25■□□□□ 0.51
CBWD3-205ENST00000469687 MAP3K5Q99683 1374 aa18.24■□□□□ 0.51
CBWD3-205ENST00000469687 HTATSF1O43719 755 aaKnown RBP18.24■□□□□ 0.51
CBWD3-205ENST00000469687 RGPD2P0DJD1 1756 aa18.23■□□□□ 0.51
CBWD3-205ENST00000469687 FLIIQ13045 1269 aa18.23■□□□□ 0.51
CBWD3-205ENST00000469687 STK31Q9BXU1 1019 aa18.23■□□□□ 0.51
CBWD3-205ENST00000469687 DDIT3P35638 169 aa18.22■□□□□ 0.51
CBWD3-205ENST00000469687 CCT4P50991 539 aaKnown RBP18.22■□□□□ 0.51
CBWD3-205ENST00000469687 FKBP5Q13451 457 aaPredicted RBP18.22■□□□□ 0.51
CBWD3-205ENST00000469687 ANKLE2Q86XL3 938 aa18.22■□□□□ 0.51
CBWD3-205ENST00000469687 MCM4P33991 863 aa18.21■□□□□ 0.51
CBWD3-205ENST00000469687 NFAT5O94916 1531 aa18.21■□□□□ 0.51
CBWD3-205ENST00000469687 CACNA1FO60840 1977 aa18.21■□□□□ 0.51
CBWD3-205ENST00000469687 ZBTB7CA1YPR0 619 aa18.21■□□□□ 0.51
CBWD3-205ENST00000469687 PLEKHG5O94827 1062 aa18.2■□□□□ 0.5
CBWD3-205ENST00000469687 SDSP20132 328 aa18.2■□□□□ 0.5
CBWD3-205ENST00000469687 ESCO1Q5FWF5 840 aa18.2■□□□□ 0.5
CBWD3-205ENST00000469687 CCDC30Q5VVM6 783 aa18.2■□□□□ 0.5
CBWD3-205ENST00000469687 NBPF6Q5VWK0 638 aa18.2■□□□□ 0.5
CBWD3-205ENST00000469687 NBPF4Q96M43 638 aa18.2■□□□□ 0.5
CBWD3-205ENST00000469687 HSP90AB1P08238 724 aaKnown RBP18.2■□□□□ 0.5
CBWD3-205ENST00000469687 TAF7Q15545 349 aaPredicted RBP18.2■□□□□ 0.5
CBWD3-205ENST00000469687 FOXD4L1Q9NU39 408 aa18.2■□□□□ 0.5
CBWD3-205ENST00000469687 EXOC6BQ9Y2D4 811 aa18.19■□□□□ 0.5
CBWD3-205ENST00000469687 IP6K1Q92551 441 aa18.18■□□□□ 0.5
CBWD3-205ENST00000469687 RTN4Q9NQC3 1192 aaKnown RBP18.18■□□□□ 0.5
CBWD3-205ENST00000469687 ZNF142P52746 1687 aaPredicted RBP18.18■□□□□ 0.5
CBWD3-205ENST00000469687 GNAI2P04899 355 aa18.18■□□□□ 0.5
CBWD3-205ENST00000469687 PNMA6EA0A0J9YXQ4 647 aa18.17■□□□□ 0.5
CBWD3-205ENST00000469687 HMMRO75330 724 aa18.17■□□□□ 0.5
CBWD3-205ENST00000469687 XPCQ01831 940 aaPredicted RBP18.17■□□□□ 0.5
CBWD3-205ENST00000469687 PSME1Q06323 249 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms