RNA–Protein interactions for RNA: ENST00000469354.1

EPHA4-211, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 2,893 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-211ENST00000469354 ZNF853P0CG23 659 aa10.99□□□□□ -0.65
EPHA4-211ENST00000469354 MVPQ14764 893 aaKnown RBP10.99□□□□□ -0.65
EPHA4-211ENST00000469354 ITPRIPQ8IWB1 547 aa10.99□□□□□ -0.65
EPHA4-211ENST00000469354 NECTIN2Q92692 538 aa10.99□□□□□ -0.65
EPHA4-211ENST00000469354 VAMP4O75379 141 aa10.99□□□□□ -0.65
EPHA4-211ENST00000469354 MS4A1P11836 297 aa10.99□□□□□ -0.65
EPHA4-211ENST00000469354 IPO8O15397 1037 aaKnown RBP10.98□□□□□ -0.65
EPHA4-211ENST00000469354 MTHFSDQ2M296 383 aaKnown RBP10.98□□□□□ -0.65
EPHA4-211ENST00000469354 TWISTNBQ3B726 338 aaPredicted RBP10.98□□□□□ -0.65
EPHA4-211ENST00000469354 C8orf58Q8NAV2 365 aa10.98□□□□□ -0.65
EPHA4-211ENST00000469354 C19orf44Q9H6X5 657 aa10.98□□□□□ -0.65
EPHA4-211ENST00000469354 PCDHB15Q9Y5E8 787 aa10.98□□□□□ -0.65
EPHA4-211ENST00000469354 ARHGEF10O15013 1369 aa10.98□□□□□ -0.65
EPHA4-211ENST00000469354 PDE4AP27815 886 aa10.98□□□□□ -0.65
EPHA4-211ENST00000469354 RTF1Q92541 710 aaKnown RBP10.98□□□□□ -0.65
EPHA4-211ENST00000469354 KIF16BQ96L93 1317 aa10.98□□□□□ -0.65
EPHA4-211ENST00000469354 ALDH1L2Q3SY69 923 aa10.97□□□□□ -0.65
EPHA4-211ENST00000469354 USHBP1Q8N6Y0 703 aa10.97□□□□□ -0.65
EPHA4-211ENST00000469354 IGSF1Q8N6C5 1336 aa10.97□□□□□ -0.65
EPHA4-211ENST00000469354 ATF3P18847 181 aa10.97□□□□□ -0.65
EPHA4-211ENST00000469354 MIS18AQ9NYP9 233 aa10.97□□□□□ -0.65
EPHA4-211ENST00000469354 TMEM57Q8N5G2 664 aa10.96□□□□□ -0.65
EPHA4-211ENST00000469354 KRT24Q2M2I5 525 aa10.96□□□□□ -0.66
EPHA4-211ENST00000469354 KRT28Q7Z3Y7 464 aa10.96□□□□□ -0.66
EPHA4-211ENST00000469354 KCNH5Q8NCM2 988 aa10.95□□□□□ -0.66
EPHA4-211ENST00000469354 TMEM94Q12767 1356 aa10.95□□□□□ -0.66
EPHA4-211ENST00000469354 AAMPQ13685 434 aa10.95□□□□□ -0.66
EPHA4-211ENST00000469354 GAS2L2Q8NHY3 880 aa10.95□□□□□ -0.66
EPHA4-211ENST00000469354 IP6K1Q92551 441 aa10.95□□□□□ -0.66
EPHA4-211ENST00000469354 DDX17Q92841 729 aaKnown RBP10.95□□□□□ -0.66
EPHA4-211ENST00000469354 DDX19BQ9UMR2 479 aa10.95□□□□□ -0.66
EPHA4-211ENST00000469354 CCDC9Q9Y3X0 531 aaKnown RBP10.95□□□□□ -0.66
EPHA4-211ENST00000469354 KDRP35968 1356 aa10.94□□□□□ -0.66
EPHA4-211ENST00000469354 RGPD1P0DJD0 1748 aa10.94□□□□□ -0.66
EPHA4-211ENST00000469354 GCP02774 474 aa10.94□□□□□ -0.66
EPHA4-211ENST00000469354 MRPL50Q8N5N7 158 aaKnown RBP10.94□□□□□ -0.66
EPHA4-211ENST00000469354 BACH2Q9BYV9 841 aa10.94□□□□□ -0.66
EPHA4-211ENST00000469354 BRPF3Q9ULD4 1205 aa10.94□□□□□ -0.66
EPHA4-211ENST00000469354 CHL1O00533 1208 aa10.94□□□□□ -0.66
EPHA4-211ENST00000469354 KIF24Q5T7B8 1368 aa10.93□□□□□ -0.66
EPHA4-211ENST00000469354 RWDD1Q9H446 243 aaPredicted RBP10.93□□□□□ -0.66
EPHA4-211ENST00000469354 MARF1Q9Y4F3 1742 aaKnown RBP10.93□□□□□ -0.66
EPHA4-211ENST00000469354 C1orf167Q5SNV9 1468 aa10.93□□□□□ -0.66
EPHA4-211ENST00000469354 MSH5O43196 834 aa10.93□□□□□ -0.66
EPHA4-211ENST00000469354 TSPYL4Q9UJ04 414 aa10.93□□□□□ -0.66
EPHA4-211ENST00000469354 NWD1Q149M9 1564 aa10.92□□□□□ -0.66
EPHA4-211ENST00000469354 ANP32AP39687 249 aaKnown RBP10.92□□□□□ -0.66
EPHA4-211ENST00000469354 NBPF6Q5VWK0 638 aa10.92□□□□□ -0.66
EPHA4-211ENST00000469354 NBPF4Q96M43 638 aa10.92□□□□□ -0.66
EPHA4-211ENST00000469354 LRRC59Q96AG4 307 aaKnown RBP10.92□□□□□ -0.66
EPHA4-211ENST00000469354 GNAT3A8MTJ3 354 aa10.91□□□□□ -0.66
EPHA4-211ENST00000469354 RTL1A6NKG5 1358 aa10.91□□□□□ -0.66
EPHA4-211ENST00000469354 BRPF1P55201 1214 aaPredicted RBP10.91□□□□□ -0.66
EPHA4-211ENST00000469354 ZC3H6P61129 1189 aaKnown RBP10.91□□□□□ -0.66
EPHA4-211ENST00000469354 LTN1O94822 1766 aa10.9□□□□□ -0.66
EPHA4-211ENST00000469354 KDM4FA0A1W2PPD8 638 aa10.9□□□□□ -0.66
EPHA4-211ENST00000469354 ARHGEF25Q86VW2 580 aa10.9□□□□□ -0.66
EPHA4-211ENST00000469354 CRB1P82279 1406 aa10.9□□□□□ -0.66
EPHA4-211ENST00000469354 ARHGAP45Q92619 1136 aa10.9□□□□□ -0.67
EPHA4-211ENST00000469354 ZBTB40Q9NUA8 1239 aa10.9□□□□□ -0.67
EPHA4-211ENST00000469354 NFAT5O94916 1531 aa10.89□□□□□ -0.67
EPHA4-211ENST00000469354 CADPS2Q86UW7 1296 aa10.89□□□□□ -0.67
EPHA4-211ENST00000469354 PDZRN3Q9UPQ7 1066 aa10.89□□□□□ -0.67
EPHA4-211ENST00000469354 IL17REQ8NFR9 667 aa10.89□□□□□ -0.67
EPHA4-211ENST00000469354 USP54Q70EL1 1684 aa10.88□□□□□ -0.67
EPHA4-211ENST00000469354 FAM161AQ3B820 660 aa10.88□□□□□ -0.67
EPHA4-211ENST00000469354 ANKRD24Q8TF21 1146 aa10.88□□□□□ -0.67
EPHA4-211ENST00000469354 API5Q9BZZ5 524 aaKnown RBP10.88□□□□□ -0.67
EPHA4-211ENST00000469354 C1orf115Q9H7X2 142 aa10.88□□□□□ -0.67
EPHA4-211ENST00000469354 AXIN2Q9Y2T1 843 aa10.88□□□□□ -0.67
EPHA4-211ENST00000469354 MAP3K5Q99683 1374 aa10.88□□□□□ -0.67
EPHA4-211ENST00000469354 MST1RQ04912 1400 aa10.88□□□□□ -0.67
EPHA4-211ENST00000469354 STRCP1A6NGW2 1772 aa10.88□□□□□ -0.67
EPHA4-211ENST00000469354 HTATSF1O43719 755 aaKnown RBP10.87□□□□□ -0.67
EPHA4-211ENST00000469354 SLC4A2P04920 1241 aa10.87□□□□□ -0.67
EPHA4-211ENST00000469354 CABLES1Q8TDN4 633 aa10.87□□□□□ -0.67
EPHA4-211ENST00000469354 MSH6P52701 1360 aa10.87□□□□□ -0.67
EPHA4-211ENST00000469354 KIAA0232Q92628 1395 aa10.87□□□□□ -0.67
EPHA4-211ENST00000469354 ZBTB7BO15156 539 aaPredicted RBP10.87□□□□□ -0.67
EPHA4-211ENST00000469354 C8orf34Q49A92 452 aa10.86□□□□□ -0.67
EPHA4-211ENST00000469354 USP19O94966 1318 aa10.86□□□□□ -0.67
EPHA4-211ENST00000469354 ABCC4O15439 1325 aa10.86□□□□□ -0.67
EPHA4-211ENST00000469354 HDAC1Q13547 482 aaPredicted RBP10.86□□□□□ -0.67
EPHA4-211ENST00000469354 TAF7Q15545 349 aaPredicted RBP10.86□□□□□ -0.67
EPHA4-211ENST00000469354 ZNF530Q6P9A1 599 aaPredicted RBP10.86□□□□□ -0.67
EPHA4-211ENST00000469354 NPHP3Q7Z494 1330 aa10.86□□□□□ -0.67
EPHA4-211ENST00000469354 NBR1Q14596 966 aa10.85□□□□□ -0.67
EPHA4-211ENST00000469354 IPO9Q96P70 1041 aaKnown RBP10.85□□□□□ -0.67
EPHA4-211ENST00000469354 LGR6Q9HBX8 967 aa10.85□□□□□ -0.67
EPHA4-211ENST00000469354 CHMP4BQ9H444 224 aaKnown RBP10.85□□□□□ -0.67
EPHA4-211ENST00000469354 ZNF335Q9H4Z2 1342 aaPredicted RBP10.84□□□□□ -0.67
EPHA4-211ENST00000469354 PLEKHO1Q53GL0 409 aaPredicted RBP10.84□□□□□ -0.67
EPHA4-211ENST00000469354 ZFP91Q96JP5 570 aaPredicted RBP10.84□□□□□ -0.67
EPHA4-211ENST00000469354 KIF1AQ12756 1690 aa10.84□□□□□ -0.67
EPHA4-211ENST00000469354 MPRIPQ6WCQ1 1025 aa10.84□□□□□ -0.67
EPHA4-211ENST00000469354 G2E3Q7L622 706 aa10.84□□□□□ -0.67
EPHA4-211ENST00000469354 STK31Q9BXU1 1019 aa10.84□□□□□ -0.67
EPHA4-211ENST00000469354 RGPD2P0DJD1 1756 aa10.84□□□□□ -0.67
EPHA4-211ENST00000469354 CHRNA2Q15822 529 aa10.83□□□□□ -0.68
EPHA4-211ENST00000469354 SLC4A10Q6U841 1118 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms