RNA–Protein interactions for RNA: ENST00000469312.6

LINC01140-203, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

TSL 5 BASIC

Gene LINC01140, Length 1,298 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-203ENST00000469312 IL2RBP14784 551 aa16.1■□□□□ 0.17
LINC01140-203ENST00000469312 BAG6P46379 1132 aa16.1■□□□□ 0.17
LINC01140-203ENST00000469312 INSRP06213 1382 aa16.1■□□□□ 0.17
LINC01140-203ENST00000469312 KIF24Q5T7B8 1368 aa16.1■□□□□ 0.17
LINC01140-203ENST00000469312 EXOC5O00471 708 aa16.09■□□□□ 0.17
LINC01140-203ENST00000469312 MORC1Q86VD1 984 aa16.09■□□□□ 0.17
LINC01140-203ENST00000469312 HSP90AB2PQ58FF8 381 aa16.08■□□□□ 0.16
LINC01140-203ENST00000469312 AMER1Q5JTC6 1135 aaPredicted RBP16.08■□□□□ 0.16
LINC01140-203ENST00000469312 NPC1L1Q9UHC9 1359 aa16.08■□□□□ 0.16
LINC01140-203ENST00000469312 SHANK3Q9BYB0 1731 aa16.08■□□□□ 0.16
LINC01140-203ENST00000469312 MKRN4PQ13434 485 aaPredicted RBP16.07■□□□□ 0.16
LINC01140-203ENST00000469312 USHBP1Q8N6Y0 703 aa16.07■□□□□ 0.16
LINC01140-203ENST00000469312 MEGF6O75095 1541 aa16.06■□□□□ 0.16
LINC01140-203ENST00000469312 MARCH10Q8NA82 808 aaPredicted RBP16.06■□□□□ 0.16
LINC01140-203ENST00000469312 NHSQ6T4R5 1651 aa16.05■□□□□ 0.16
LINC01140-203ENST00000469312 RREB1Q92766 1687 aa16.05■□□□□ 0.16
LINC01140-203ENST00000469312 EN1Q05925 392 aaPredicted RBP16.05■□□□□ 0.16
LINC01140-203ENST00000469312 ABCB7O75027 752 aa16.04■□□□□ 0.16
LINC01140-203ENST00000469312 APBA3O96018 575 aa16.04■□□□□ 0.16
LINC01140-203ENST00000469312 NBPF6Q5VWK0 638 aa16.04■□□□□ 0.16
LINC01140-203ENST00000469312 NBPF4Q96M43 638 aa16.04■□□□□ 0.16
LINC01140-203ENST00000469312 POLKQ9UBT6 870 aa16.04■□□□□ 0.16
LINC01140-203ENST00000469312 DOT1LQ8TEK3 1739 aa16.03■□□□□ 0.16
LINC01140-203ENST00000469312 CNGB1Q14028 1251 aaPredicted RBP16.03■□□□□ 0.16
LINC01140-203ENST00000469312 RGPD3A6NKT7 1758 aaPredicted RBP16.03■□□□□ 0.16
LINC01140-203ENST00000469312 RGPD4Q7Z3J3 1758 aa16.03■□□□□ 0.16
LINC01140-203ENST00000469312 NUP188Q5SRE5 1749 aa16.02■□□□□ 0.16
LINC01140-203ENST00000469312 CC2D1BQ5T0F9 858 aaKnown RBP16.02■□□□□ 0.16
LINC01140-203ENST00000469312 EZH2Q15910 746 aaKnown RBP16.01■□□□□ 0.15
LINC01140-203ENST00000469312 RAPGEF4Q8WZA2 1011 aa16.01■□□□□ 0.15
LINC01140-203ENST00000469312 BCL9O00512 1426 aa16.01■□□□□ 0.15
LINC01140-203ENST00000469312 PKD1L3Q7Z443 1732 aa16■□□□□ 0.15
LINC01140-203ENST00000469312 ZNF316A6NFI3 1004 aaPredicted RBP16■□□□□ 0.15
LINC01140-203ENST00000469312 TATP17735 454 aaPredicted RBP16■□□□□ 0.15
LINC01140-203ENST00000469312 DDX54Q8TDD1 881 aaKnown RBP16■□□□□ 0.15
LINC01140-203ENST00000469312 ACSBG1Q96GR2 724 aa16■□□□□ 0.15
LINC01140-203ENST00000469312 BTAF1O14981 1849 aa15.99■□□□□ 0.15
LINC01140-203ENST00000469312 DDX10Q13206 875 aaKnown RBP15.99■□□□□ 0.15
LINC01140-203ENST00000469312 KAT6BQ8WYB5 2073 aa15.99■□□□□ 0.15
LINC01140-203ENST00000469312 EIF4A2Q14240 407 aaKnown RBP15.98■□□□□ 0.15
LINC01140-203ENST00000469312 NCAPD2Q15021 1401 aa15.98■□□□□ 0.15
LINC01140-203ENST00000469312 ZCRB1Q8TBF4 217 aaKnown RBP15.98■□□□□ 0.15
LINC01140-203ENST00000469312 PARD3Q8TEW0 1356 aa15.98■□□□□ 0.15
LINC01140-203ENST00000469312 PTF1AQ7RTS3 328 aa15.97■□□□□ 0.15
LINC01140-203ENST00000469312 CAMKK2Q96RR4 588 aa15.97■□□□□ 0.15
LINC01140-203ENST00000469312 EYA1Q99502 592 aa15.97■□□□□ 0.15
LINC01140-203ENST00000469312 BCL11BQ9C0K0 894 aaPredicted RBP15.97■□□□□ 0.15
LINC01140-203ENST00000469312 DSG3P32926 999 aa15.96■□□□□ 0.15
LINC01140-203ENST00000469312 KCNQ2O43526 872 aa15.95■□□□□ 0.14
LINC01140-203ENST00000469312 PCDH11XQ9BZA7 1347 aa15.94■□□□□ 0.14
LINC01140-203ENST00000469312 PCDH11YQ9BZA8 1340 aa15.94■□□□□ 0.14
LINC01140-203ENST00000469312 MTHFSP49914 203 aa15.94■□□□□ 0.14
LINC01140-203ENST00000469312 TOGARAM1Q9Y4F4 1720 aa15.94■□□□□ 0.14
LINC01140-203ENST00000469312 PSDA5PKW4 1024 aaPredicted RBP15.93■□□□□ 0.14
LINC01140-203ENST00000469312 ZBTB12Q9Y330 459 aaPredicted RBP15.93■□□□□ 0.14
LINC01140-203ENST00000469312 IGSF1Q8N6C5 1336 aa15.93■□□□□ 0.14
LINC01140-203ENST00000469312 RALBP1Q15311 655 aa15.92■□□□□ 0.14
LINC01140-203ENST00000469312 SYTL4Q96C24 671 aaPredicted RBP15.92■□□□□ 0.14
LINC01140-203ENST00000469312 SPDYE4A6NLX3 237 aa15.91■□□□□ 0.14
LINC01140-203ENST00000469312 PLSCR1O15162 318 aa15.91■□□□□ 0.14
LINC01140-203ENST00000469312 ITGB4P16144 1822 aa15.91■□□□□ 0.14
LINC01140-203ENST00000469312 CFAP53Q96M91 514 aa15.9■□□□□ 0.14
LINC01140-203ENST00000469312 SPG7Q9UQ90 795 aa15.9■□□□□ 0.14
LINC01140-203ENST00000469312 R3HDM1Q15032 1099 aaKnown RBP15.89■□□□□ 0.13
LINC01140-203ENST00000469312 DIAPH1O60610 1272 aaKnown RBP15.88■□□□□ 0.13
LINC01140-203ENST00000469312 PRIM1P49642 420 aaKnown RBP15.88■□□□□ 0.13
LINC01140-203ENST00000469312 CACNB1Q02641 598 aaPredicted RBP15.88■□□□□ 0.13
LINC01140-203ENST00000469312 NBPF14Q5TI25 921 aa15.88■□□□□ 0.13
LINC01140-203ENST00000469312 LY75O60449 1722 aa15.88■□□□□ 0.13
LINC01140-203ENST00000469312 COL3A1P02461 1466 aaPredicted RBP15.87■□□□□ 0.13
LINC01140-203ENST00000469312 CYP27B1O15528 508 aa15.87■□□□□ 0.13
LINC01140-203ENST00000469312 PPP2R1AP30153 589 aa15.87■□□□□ 0.13
LINC01140-203ENST00000469312 IL13P35225 146 aa15.87■□□□□ 0.13
LINC01140-203ENST00000469312 AEBP1Q8IUX7 1158 aa15.87■□□□□ 0.13
LINC01140-203ENST00000469312 PLEKHG2Q9H7P9 1386 aa15.87■□□□□ 0.13
LINC01140-203ENST00000469312 TXNRD1Q16881 649 aa15.86■□□□□ 0.13
LINC01140-203ENST00000469312 SULT6B1Q6IMI4 303 aa15.86■□□□□ 0.13
LINC01140-203ENST00000469312 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.86■□□□□ 0.13
LINC01140-203ENST00000469312 PAPPAQ13219 1627 aa15.86■□□□□ 0.13
LINC01140-203ENST00000469312 NUDCQ9Y266 331 aa15.85■□□□□ 0.13
LINC01140-203ENST00000469312 LRP5O75197 1615 aa15.84■□□□□ 0.13
LINC01140-203ENST00000469312 IFNL2Q8IZJ0 200 aa15.84■□□□□ 0.13
LINC01140-203ENST00000469312 PROM2Q8N271 834 aa15.84■□□□□ 0.13
LINC01140-203ENST00000469312 ANO8Q9HCE9 1232 aaPredicted RBP15.84■□□□□ 0.13
LINC01140-203ENST00000469312 VIRMAQ69YN4 1812 aaKnown RBP15.83■□□□□ 0.12
LINC01140-203ENST00000469312 HMOX1P09601 288 aa15.83■□□□□ 0.12
LINC01140-203ENST00000469312 PHKG2P15735 406 aa15.83■□□□□ 0.12
LINC01140-203ENST00000469312 KDRP35968 1356 aa15.83■□□□□ 0.12
LINC01140-203ENST00000469312 AMOTQ4VCS5 1084 aa15.82■□□□□ 0.12
LINC01140-203ENST00000469312 PLEKHO1Q53GL0 409 aaPredicted RBP15.82■□□□□ 0.12
LINC01140-203ENST00000469312 ZNF530Q6P9A1 599 aaPredicted RBP15.82■□□□□ 0.12
LINC01140-203ENST00000469312 MPRIPQ6WCQ1 1025 aa15.82■□□□□ 0.12
LINC01140-203ENST00000469312 U2SURPO15042 1029 aaKnown RBP15.81■□□□□ 0.12
LINC01140-203ENST00000469312 C5P01031 1676 aa15.81■□□□□ 0.12
LINC01140-203ENST00000469312 CASZ1Q86V15 1759 aa15.81■□□□□ 0.12
LINC01140-203ENST00000469312 STK32BQ9NY57 414 aa15.81■□□□□ 0.12
LINC01140-203ENST00000469312 TUBGCP6Q96RT7 1819 aa15.8■□□□□ 0.12
LINC01140-203ENST00000469312 NKX1-1Q15270 411 aaPredicted RBP15.8■□□□□ 0.12
LINC01140-203ENST00000469312 C1orf141Q5JVX7 400 aa15.8■□□□□ 0.12
LINC01140-203ENST00000469312 PRKRIP1Q9H875 184 aaPredicted RBP15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms