RNA–Protein interactions for RNA: ENST00000469275.5

PRKD3-207, Transcript of protein kinase D3, humanhuman

TSL 2

Gene PRKD3, Length 2,642 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-207ENST00000469275 HOXC9P31274 260 aa7.57□□□□□ -1.2
PRKD3-207ENST00000469275 TSPYL4Q9UJ04 414 aa7.57□□□□□ -1.2
PRKD3-207ENST00000469275 F6X3S4 739 aa7.57□□□□□ -1.2
PRKD3-207ENST00000469275 CACNB1Q02641 598 aaPredicted RBP7.57□□□□□ -1.2
PRKD3-207ENST00000469275 SLC4A10Q6U841 1118 aa7.57□□□□□ -1.2
PRKD3-207ENST00000469275 LRRC59Q96AG4 307 aaKnown RBP7.57□□□□□ -1.2
PRKD3-207ENST00000469275 USP31Q70CQ4 1352 aa7.57□□□□□ -1.2
PRKD3-207ENST00000469275 ZBTB7BO15156 539 aaPredicted RBP7.56□□□□□ -1.2
PRKD3-207ENST00000469275 ANKRD45Q5TZF3 282 aa7.56□□□□□ -1.2
PRKD3-207ENST00000469275 SBNO1A3KN83 1393 aa7.56□□□□□ -1.2
PRKD3-207ENST00000469275 PIK3C2AO00443 1686 aa7.56□□□□□ -1.2
PRKD3-207ENST00000469275 DCAF8L1A6NGE4 600 aa7.56□□□□□ -1.2
PRKD3-207ENST00000469275 MFAP1P55081 439 aaKnown RBP7.56□□□□□ -1.2
PRKD3-207ENST00000469275 G2E3Q7L622 706 aa7.56□□□□□ -1.2
PRKD3-207ENST00000469275 USP19O94966 1318 aa7.55□□□□□ -1.2
PRKD3-207ENST00000469275 SPRYD3Q8NCJ5 442 aa7.55□□□□□ -1.2
PRKD3-207ENST00000469275 PIK3R4Q99570 1358 aa7.55□□□□□ -1.2
PRKD3-207ENST00000469275 CHL1O00533 1208 aa7.55□□□□□ -1.2
PRKD3-207ENST00000469275 SIRT2Q8IXJ6 389 aa7.55□□□□□ -1.2
PRKD3-207ENST00000469275 ATF5Q9Y2D1 282 aaPredicted RBP7.55□□□□□ -1.2
PRKD3-207ENST00000469275 XRN1Q8IZH2 1706 aaKnown RBP7.55□□□□□ -1.2
PRKD3-207ENST00000469275 HSPA2P54652 639 aa7.54□□□□□ -1.2
PRKD3-207ENST00000469275 HDAC1Q13547 482 aaPredicted RBP7.54□□□□□ -1.2
PRKD3-207ENST00000469275 PROSER2Q86WR7 435 aaPredicted RBP7.54□□□□□ -1.2
PRKD3-207ENST00000469275 ZNF428Q96B54 188 aa7.54□□□□□ -1.2
PRKD3-207ENST00000469275 DDRGK1Q96HY6 314 aa7.54□□□□□ -1.2
PRKD3-207ENST00000469275 NALCNQ8IZF0 1738 aa7.54□□□□□ -1.2
PRKD3-207ENST00000469275 IGSF1Q8N6C5 1336 aa7.54□□□□□ -1.2
PRKD3-207ENST00000469275 NBPF6Q5VWK0 638 aa7.54□□□□□ -1.2
PRKD3-207ENST00000469275 NBPF4Q96M43 638 aa7.54□□□□□ -1.2
PRKD3-207ENST00000469275 ZC3H6P61129 1189 aaKnown RBP7.53□□□□□ -1.2
PRKD3-207ENST00000469275 MYT1Q01538 1121 aa7.53□□□□□ -1.2
PRKD3-207ENST00000469275 AAMPQ13685 434 aa7.53□□□□□ -1.2
PRKD3-207ENST00000469275 RTL5Q5HYW3 569 aaPredicted RBP7.53□□□□□ -1.2
PRKD3-207ENST00000469275 SLKQ9H2G2 1235 aaPredicted RBP7.53□□□□□ -1.2
PRKD3-207ENST00000469275 ABCC4O15439 1325 aa7.53□□□□□ -1.2
PRKD3-207ENST00000469275 SMC5Q8IY18 1101 aa7.53□□□□□ -1.2
PRKD3-207ENST00000469275 IL17REQ8NFR9 667 aa7.53□□□□□ -1.2
PRKD3-207ENST00000469275 MEIS3Q99687 375 aa7.53□□□□□ -1.2
PRKD3-207ENST00000469275 ARHGEF10O15013 1369 aa7.53□□□□□ -1.2
PRKD3-207ENST00000469275 NWD1Q149M9 1564 aa7.53□□□□□ -1.2
PRKD3-207ENST00000469275 GNAT3A8MTJ3 354 aa7.52□□□□□ -1.21
PRKD3-207ENST00000469275 EIF2S2P20042 333 aaKnown RBP7.52□□□□□ -1.21
PRKD3-207ENST00000469275 CHD1LQ86WJ1 897 aa7.52□□□□□ -1.21
PRKD3-207ENST00000469275 GAS2L2Q8NHY3 880 aa7.52□□□□□ -1.21
PRKD3-207ENST00000469275 API5Q9BZZ5 524 aaKnown RBP7.52□□□□□ -1.21
PRKD3-207ENST00000469275 LGR6Q9HBX8 967 aa7.52□□□□□ -1.21
PRKD3-207ENST00000469275 CRB1P82279 1406 aa7.52□□□□□ -1.21
PRKD3-207ENST00000469275 MSH6P52701 1360 aa7.52□□□□□ -1.21
PRKD3-207ENST00000469275 C16orf71Q8IYS4 520 aaPredicted RBP7.52□□□□□ -1.21
PRKD3-207ENST00000469275 CABLES1Q8TDN4 633 aa7.52□□□□□ -1.21
PRKD3-207ENST00000469275 NPHP4O75161 1426 aaPredicted RBP7.52□□□□□ -1.21
PRKD3-207ENST00000469275 SMARCA5O60264 1052 aaPredicted RBP7.51□□□□□ -1.21
PRKD3-207ENST00000469275 ANXA1P04083 346 aa7.51□□□□□ -1.21
PRKD3-207ENST00000469275 NUCB1Q02818 461 aa7.51□□□□□ -1.21
PRKD3-207ENST00000469275 MPRIPQ6WCQ1 1025 aa7.51□□□□□ -1.21
PRKD3-207ENST00000469275 ANKARQ7Z5J8 1434 aa7.51□□□□□ -1.21
PRKD3-207ENST00000469275 ARHGAP45Q92619 1136 aa7.51□□□□□ -1.21
PRKD3-207ENST00000469275 UPF2Q9HAU5 1272 aaKnown RBP7.51□□□□□ -1.21
PRKD3-207ENST00000469275 FMN2Q9NZ56 1722 aa7.51□□□□□ -1.21
PRKD3-207ENST00000469275 CHD2O14647 1828 aaKnown RBP7.51□□□□□ -1.21
PRKD3-207ENST00000469275 KCNQ3O43525 872 aa7.51□□□□□ -1.21
PRKD3-207ENST00000469275 GCP02774 474 aa7.51□□□□□ -1.21
PRKD3-207ENST00000469275 BRPF1P55201 1214 aaPredicted RBP7.51□□□□□ -1.21
PRKD3-207ENST00000469275 FKBP5Q13451 457 aaPredicted RBP7.51□□□□□ -1.21
PRKD3-207ENST00000469275 AXIN2Q9Y2T1 843 aa7.51□□□□□ -1.21
PRKD3-207ENST00000469275 KDRP35968 1356 aa7.51□□□□□ -1.21
PRKD3-207ENST00000469275 RGPD1P0DJD0 1748 aa7.51□□□□□ -1.21
PRKD3-207ENST00000469275 DEKP35659 375 aaKnown RBP7.5□□□□□ -1.21
PRKD3-207ENST00000469275 OTUD7AQ8TE49 926 aaPredicted RBP7.5□□□□□ -1.21
PRKD3-207ENST00000469275 ADGRL3Q9HAR2 1447 aa7.5□□□□□ -1.21
PRKD3-207ENST00000469275 KRT28Q7Z3Y7 464 aa7.5□□□□□ -1.21
PRKD3-207ENST00000469275 IP6K1Q92551 441 aa7.5□□□□□ -1.21
PRKD3-207ENST00000469275 STK31Q9BXU1 1019 aa7.5□□□□□ -1.21
PRKD3-207ENST00000469275 LMTK3Q96Q04 1460 aa7.5□□□□□ -1.21
PRKD3-207ENST00000469275 ATXN8OSP0DMR3 200 aa7.49□□□□□ -1.21
PRKD3-207ENST00000469275 PHAXQ9H814 394 aaKnown RBP7.49□□□□□ -1.21
PRKD3-207ENST00000469275 RGS12O14924 1447 aa7.49□□□□□ -1.21
PRKD3-207ENST00000469275 ZNF530Q6P9A1 599 aaPredicted RBP7.49□□□□□ -1.21
PRKD3-207ENST00000469275 MARF1Q9Y4F3 1742 aaKnown RBP7.49□□□□□ -1.21
PRKD3-207ENST00000469275 LTN1O94822 1766 aa7.49□□□□□ -1.21
PRKD3-207ENST00000469275 MAP3K5Q99683 1374 aa7.49□□□□□ -1.21
PRKD3-207ENST00000469275 FLIIQ13045 1269 aa7.48□□□□□ -1.21
PRKD3-207ENST00000469275 CHRNA2Q15822 529 aa7.48□□□□□ -1.21
PRKD3-207ENST00000469275 TSHZ3Q63HK5 1081 aa7.48□□□□□ -1.21
PRKD3-207ENST00000469275 ANKRD24Q8TF21 1146 aa7.48□□□□□ -1.21
PRKD3-207ENST00000469275 TBC1D32Q96NH3 1257 aa7.48□□□□□ -1.21
PRKD3-207ENST00000469275 C22orf23Q9BZE7 217 aa7.48□□□□□ -1.21
PRKD3-207ENST00000469275 NCOA3Q9Y6Q9 1424 aa7.48□□□□□ -1.21
PRKD3-207ENST00000469275 RGPD2P0DJD1 1756 aa7.48□□□□□ -1.21
PRKD3-207ENST00000469275 TAF7Q15545 349 aaPredicted RBP7.48□□□□□ -1.21
PRKD3-207ENST00000469275 NFKBIBQ15653 356 aa7.48□□□□□ -1.21
PRKD3-207ENST00000469275 HDGFL1Q5TGJ6 251 aa7.48□□□□□ -1.21
PRKD3-207ENST00000469275 INTS3Q68E01 1043 aaKnown RBP7.48□□□□□ -1.21
PRKD3-207ENST00000469275 CEP85Q6P2H3 762 aa7.48□□□□□ -1.21
PRKD3-207ENST00000469275 KIAA0232Q92628 1395 aa7.48□□□□□ -1.21
PRKD3-207ENST00000469275 VIRMAQ69YN4 1812 aaKnown RBP7.48□□□□□ -1.21
PRKD3-207ENST00000469275 PRAMEF22A3QJZ6 481 aa7.48□□□□□ -1.21
PRKD3-207ENST00000469275 FRAT2O75474 233 aaPredicted RBP7.48□□□□□ -1.21
PRKD3-207ENST00000469275 GCC1Q96CN9 775 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms