RNA–Protein interactions for RNA: ENST00000469232.5

NPHP3-204, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,616 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-204ENST00000469232 ZNF521Q96K83 1311 aa10.84□□□□□ -0.67
NPHP3-204ENST00000469232 FAM83GA6ND36 823 aa10.84□□□□□ -0.67
NPHP3-204ENST00000469232 RASEFQ8IZ41 740 aa10.84□□□□□ -0.67
NPHP3-204ENST00000469232 SLIT2O94813 1529 aa10.83□□□□□ -0.68
NPHP3-204ENST00000469232 HSPA1LP34931 641 aa10.83□□□□□ -0.68
NPHP3-204ENST00000469232 CCDC27Q2M243 656 aa10.83□□□□□ -0.68
NPHP3-204ENST00000469232 PRDM11Q9NQV5 511 aa10.83□□□□□ -0.68
NPHP3-204ENST00000469232 NWD2Q9ULI1 1742 aa10.83□□□□□ -0.68
NPHP3-204ENST00000469232 NRAPQ86VF7 1730 aa10.82□□□□□ -0.68
NPHP3-204ENST00000469232 U2SURPO15042 1029 aaKnown RBP10.82□□□□□ -0.68
NPHP3-204ENST00000469232 NBPF6Q5VWK0 638 aa10.82□□□□□ -0.68
NPHP3-204ENST00000469232 ANKRD24Q8TF21 1146 aa10.82□□□□□ -0.68
NPHP3-204ENST00000469232 NBPF4Q96M43 638 aa10.82□□□□□ -0.68
NPHP3-204ENST00000469232 WDR17Q8IZU2 1322 aa10.82□□□□□ -0.68
NPHP3-204ENST00000469232 RGPD2P0DJD1 1756 aa10.82□□□□□ -0.68
NPHP3-204ENST00000469232 AEBP1Q8IUX7 1158 aa10.81□□□□□ -0.68
NPHP3-204ENST00000469232 LRP6O75581 1613 aa10.8□□□□□ -0.68
NPHP3-204ENST00000469232 NUBP1P53384 320 aa10.8□□□□□ -0.68
NPHP3-204ENST00000469232 CHRNA2Q15822 529 aa10.8□□□□□ -0.68
NPHP3-204ENST00000469232 SULT6B1Q6IMI4 303 aa10.8□□□□□ -0.68
NPHP3-204ENST00000469232 TCP11L2Q8N4U5 519 aa10.8□□□□□ -0.68
NPHP3-204ENST00000469232 PLCH1Q4KWH8 1693 aa10.8□□□□□ -0.68
NPHP3-204ENST00000469232 APAF1O14727 1248 aa10.8□□□□□ -0.68
NPHP3-204ENST00000469232 PRKAR2BP31323 418 aa10.8□□□□□ -0.68
NPHP3-204ENST00000469232 HNRNPUQ00839 825 aaKnown RBP eCLIP10.8□□□□□ -0.68
NPHP3-204ENST00000469232 TMPOP42166 694 aaKnown RBP10.79□□□□□ -0.68
NPHP3-204ENST00000469232 FNBP4Q8N3X1 1017 aaPredicted RBP10.79□□□□□ -0.68
NPHP3-204ENST00000469232 PHACTR3Q96KR7 559 aa10.79□□□□□ -0.68
NPHP3-204ENST00000469232 CARD10Q9BWT7 1032 aa10.79□□□□□ -0.68
NPHP3-204ENST00000469232 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.78□□□□□ -0.68
NPHP3-204ENST00000469232 GALR2O43603 387 aaPredicted RBP10.78□□□□□ -0.68
NPHP3-204ENST00000469232 HMOX1P09601 288 aa10.78□□□□□ -0.68
NPHP3-204ENST00000469232 PDE3BQ13370 1112 aa10.78□□□□□ -0.68
NPHP3-204ENST00000469232 CCDC146Q8IYE0 955 aa10.78□□□□□ -0.68
NPHP3-204ENST00000469232 FBXO41Q8TF61 875 aa10.78□□□□□ -0.68
NPHP3-204ENST00000469232 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.78□□□□□ -0.687e-7■■□□□ 14.1
NPHP3-204ENST00000469232 CRB1P82279 1406 aa10.78□□□□□ -0.68
NPHP3-204ENST00000469232 HAP1P54257 671 aaPredicted RBP10.77□□□□□ -0.68
NPHP3-204ENST00000469232 NFE2L2Q16236 605 aa10.77□□□□□ -0.68
NPHP3-204ENST00000469232 BCL9LQ86UU0 1499 aa10.77□□□□□ -0.69
NPHP3-204ENST00000469232 PKD1L3Q7Z443 1732 aa10.77□□□□□ -0.69
NPHP3-204ENST00000469232 DISP2A7MBM2 1401 aa10.77□□□□□ -0.69
NPHP3-204ENST00000469232 TRMT2AQ8IZ69 625 aaKnown RBP10.76□□□□□ -0.69
NPHP3-204ENST00000469232 TRIM35Q9UPQ4 493 aa10.76□□□□□ -0.69
NPHP3-204ENST00000469232 ADAMTS7Q9UKP4 1686 aa10.76□□□□□ -0.69
NPHP3-204ENST00000469232 WDR63Q8IWG1 891 aa10.76□□□□□ -0.69
NPHP3-204ENST00000469232 WWC1Q8IX03 1113 aa10.76□□□□□ -0.69
NPHP3-204ENST00000469232 LTV1Q96GA3 475 aaPredicted RBP10.76□□□□□ -0.69
NPHP3-204ENST00000469232 BTG4Q9NY30 223 aa10.76□□□□□ -0.69
NPHP3-204ENST00000469232 OVOS2A0A0G2JMS6 1433 aa10.76□□□□□ -0.69
NPHP3-204ENST00000469232 MEGF6O75095 1541 aa10.75□□□□□ -0.69
NPHP3-204ENST00000469232 IL16Q14005 1332 aa10.75□□□□□ -0.69
NPHP3-204ENST00000469232 MAPK8IP3Q9UPT6 1336 aa10.75□□□□□ -0.69
NPHP3-204ENST00000469232 HTATSF1O43719 755 aaKnown RBP10.75□□□□□ -0.69
NPHP3-204ENST00000469232 YTHDC1Q96MU7 727 aaKnown RBP10.75□□□□□ -0.69
NPHP3-204ENST00000469232 DLG5Q8TDM6 1919 aa10.75□□□□□ -0.69
NPHP3-204ENST00000469232 ZBTB7CA1YPR0 619 aa10.74□□□□□ -0.69
NPHP3-204ENST00000469232 POTEIP0CG38 1075 aa10.74□□□□□ -0.69
NPHP3-204ENST00000469232 MTHFSDQ2M296 383 aaKnown RBP10.74□□□□□ -0.69
NPHP3-204ENST00000469232 AMOTQ4VCS5 1084 aa10.74□□□□□ -0.69
NPHP3-204ENST00000469232 LARP1Q6PKG0 1096 aaKnown RBP10.74□□□□□ -0.69
NPHP3-204ENST00000469232 GAS2L2Q8NHY3 880 aa10.74□□□□□ -0.69
NPHP3-204ENST00000469232 LRRC37A3O60309 1634 aa10.74□□□□□ -0.69
NPHP3-204ENST00000469232 PARP4Q9UKK3 1724 aaKnown RBP10.73□□□□□ -0.69
NPHP3-204ENST00000469232 ADAMTS2O95450 1211 aa10.73□□□□□ -0.69
NPHP3-204ENST00000469232 KLHL34Q8N239 644 aa10.73□□□□□ -0.69
NPHP3-204ENST00000469232 USHBP1Q8N6Y0 703 aa10.73□□□□□ -0.69
NPHP3-204ENST00000469232 NLRP2Q9NX02 1062 aa10.73□□□□□ -0.69
NPHP3-204ENST00000469232 WNK3Q9BYP7 1800 aa10.73□□□□□ -0.69
NPHP3-204ENST00000469232 SPATA31A5Q5VU36 1347 aa10.73□□□□□ -0.69
NPHP3-204ENST00000469232 SPATA31A7Q8IWB4 1347 aa10.73□□□□□ -0.69
NPHP3-204ENST00000469232 NEFMP07197 916 aa10.73□□□□□ -0.69
NPHP3-204ENST00000469232 RIPK4P57078 832 aa10.73□□□□□ -0.69
NPHP3-204ENST00000469232 UNC5CLQ8IV45 518 aa10.73□□□□□ -0.69
NPHP3-204ENST00000469232 THRAP3Q9Y2W1 955 aaKnown RBP10.73□□□□□ -0.69
NPHP3-204ENST00000469232 CEMIPQ8WUJ3 1361 aa10.72□□□□□ -0.69
NPHP3-204ENST00000469232 SPATA31A1Q5TZJ5 1347 aa10.72□□□□□ -0.69
NPHP3-204ENST00000469232 NUTM2BA6NNL0 878 aaPredicted RBP10.72□□□□□ -0.69
NPHP3-204ENST00000469232 NUTM2EB1AL46 878 aaPredicted RBP10.72□□□□□ -0.69
NPHP3-204ENST00000469232 SLFN5Q08AF3 891 aa10.72□□□□□ -0.69
NPHP3-204ENST00000469232 LMOD3Q0VAK6 560 aa10.72□□□□□ -0.69
NPHP3-204ENST00000469232 VPS72Q15906 364 aa10.72□□□□□ -0.69
NPHP3-204ENST00000469232 PLEKHO1Q53GL0 409 aaPredicted RBP10.72□□□□□ -0.69
NPHP3-204ENST00000469232 BARGINQ6ZT62 677 aa10.72□□□□□ -0.69
NPHP3-204ENST00000469232 NUTM2AQ8IVF1 878 aaPredicted RBP10.72□□□□□ -0.69
NPHP3-204ENST00000469232 SHANK3Q9BYB0 1731 aa10.72□□□□□ -0.69
NPHP3-204ENST00000469232 ZNF853P0CG23 659 aa10.71□□□□□ -0.69
NPHP3-204ENST00000469232 CSB-PGBD3P0DP91 1061 aa10.71□□□□□ -0.69
NPHP3-204ENST00000469232 EVA1CP58658 441 aa10.71□□□□□ -0.69
NPHP3-204ENST00000469232 TOM1L2Q6ZVM7 507 aa10.71□□□□□ -0.69
NPHP3-204ENST00000469232 FAM212AQ96EL1 285 aa10.71□□□□□ -0.69
NPHP3-204ENST00000469232 MS4A3Q96HJ5 214 aa10.71□□□□□ -0.69
NPHP3-204ENST00000469232 DCBLD2Q96PD2 775 aa10.71□□□□□ -0.69
NPHP3-204ENST00000469232 ATRNO75882 1429 aa10.71□□□□□ -0.7
NPHP3-204ENST00000469232 MAP3K5Q99683 1374 aa10.7□□□□□ -0.7
NPHP3-204ENST00000469232 IL2RBP14784 551 aa10.7□□□□□ -0.7
NPHP3-204ENST00000469232 TATP17735 454 aaPredicted RBP10.7□□□□□ -0.7
NPHP3-204ENST00000469232 GOLGA2Q08379 1002 aa10.7□□□□□ -0.7
NPHP3-204ENST00000469232 NKX1-1Q15270 411 aaPredicted RBP10.7□□□□□ -0.7
NPHP3-204ENST00000469232 AKAP4Q5JQC9 854 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms