RNA–Protein interactions for RNA: ENST00000469154.5

SMARCD3-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 5

Gene SMARCD3, Length 2,415 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-205ENST00000469154 FBLN1P23142 703 aa17.78■□□□□ 0.44
SMARCD3-205ENST00000469154 MCM4P33991 863 aa17.78■□□□□ 0.44
SMARCD3-205ENST00000469154 DDX17Q92841 729 aaKnown RBP17.78■□□□□ 0.44
SMARCD3-205ENST00000469154 TTC21AQ8NDW8 1320 aa17.77■□□□□ 0.44
SMARCD3-205ENST00000469154 VAMP4O75379 141 aa17.77■□□□□ 0.44
SMARCD3-205ENST00000469154 LNPKQ9C0E8 428 aa17.77■□□□□ 0.44
SMARCD3-205ENST00000469154 LMOD3Q0VAK6 560 aa17.77■□□□□ 0.43
SMARCD3-205ENST00000469154 BMP2KLQ5H9B9 411 aa17.77■□□□□ 0.43
SMARCD3-205ENST00000469154 FAM43AQ8N2R8 423 aa17.77■□□□□ 0.43
SMARCD3-205ENST00000469154 NUTM2GQ5VZR2 741 aa17.76■□□□□ 0.43
SMARCD3-205ENST00000469154 SPRYD3Q8NCJ5 442 aa17.76■□□□□ 0.43
SMARCD3-205ENST00000469154 SNX21Q969T3 373 aa17.76■□□□□ 0.43
SMARCD3-205ENST00000469154 ZBTB7BO15156 539 aaPredicted RBP17.76■□□□□ 0.43
SMARCD3-205ENST00000469154 IL13P35225 146 aa17.76■□□□□ 0.43
SMARCD3-205ENST00000469154 ABTB2Q8N961 1025 aa17.76■□□□□ 0.43
SMARCD3-205ENST00000469154 PHACTR3Q96KR7 559 aa17.76■□□□□ 0.43
SMARCD3-205ENST00000469154 ABCC4O15439 1325 aa17.75■□□□□ 0.43
SMARCD3-205ENST00000469154 HMOX1P09601 288 aa17.75■□□□□ 0.43
SMARCD3-205ENST00000469154 ZNF853P0CG23 659 aa17.75■□□□□ 0.43
SMARCD3-205ENST00000469154 BRINP3Q76B58 766 aa17.75■□□□□ 0.43
SMARCD3-205ENST00000469154 KRT28Q7Z3Y7 464 aa17.74■□□□□ 0.43
SMARCD3-205ENST00000469154 NLRP6P59044 892 aa17.74■□□□□ 0.43
SMARCD3-205ENST00000469154 EMILIN1Q9Y6C2 1016 aa17.73■□□□□ 0.43
SMARCD3-205ENST00000469154 SOX12O15370 315 aa17.73■□□□□ 0.43
SMARCD3-205ENST00000469154 KIF1AQ12756 1690 aa17.73■□□□□ 0.43
SMARCD3-205ENST00000469154 MBIPQ9NS73 344 aa17.72■□□□□ 0.43
SMARCD3-205ENST00000469154 KIF24Q5T7B8 1368 aa17.72■□□□□ 0.43
SMARCD3-205ENST00000469154 ANKRD45Q5TZF3 282 aa17.72■□□□□ 0.43
SMARCD3-205ENST00000469154 LMOD2Q6P5Q4 547 aa17.72■□□□□ 0.43
SMARCD3-205ENST00000469154 THUMPD2Q9BTF0 503 aaKnown RBP17.72■□□□□ 0.43
SMARCD3-205ENST00000469154 API5Q9BZZ5 524 aaKnown RBP17.72■□□□□ 0.43
SMARCD3-205ENST00000469154 OVOS2A0A0J9YW53 1432 aa17.72■□□□□ 0.43
SMARCD3-205ENST00000469154 OVOS2Q6IE36 1432 aa17.72■□□□□ 0.43
SMARCD3-205ENST00000469154 DDX11L8A8MPP1 907 aa17.71■□□□□ 0.43
SMARCD3-205ENST00000469154 NPHP3Q7Z494 1330 aa17.71■□□□□ 0.43
SMARCD3-205ENST00000469154 TWISTNBQ3B726 338 aaPredicted RBP17.71■□□□□ 0.43
SMARCD3-205ENST00000469154 TSPYL6Q8N831 410 aa17.71■□□□□ 0.43
SMARCD3-205ENST00000469154 CFAP44Q96MT7 982 aa17.71■□□□□ 0.43
SMARCD3-205ENST00000469154 PIK3C2AO00443 1686 aa17.7■□□□□ 0.42
SMARCD3-205ENST00000469154 GOLGA6L3A6NEY3 463 aa17.7■□□□□ 0.42
SMARCD3-205ENST00000469154 DDIT3P35638 169 aa17.7■□□□□ 0.42
SMARCD3-205ENST00000469154 RRS1Q15050 365 aaKnown RBP17.7■□□□□ 0.42
SMARCD3-205ENST00000469154 CIZ1Q9ULV3 898 aaPredicted RBP17.7■□□□□ 0.42
SMARCD3-205ENST00000469154 USP31Q70CQ4 1352 aa17.69■□□□□ 0.42
SMARCD3-205ENST00000469154 PLEKHG5O94827 1062 aa17.69■□□□□ 0.42
SMARCD3-205ENST00000469154 FSD2A1L4K1 749 aa17.69■□□□□ 0.42
SMARCD3-205ENST00000469154 ANO8Q9HCE9 1232 aaPredicted RBP17.69■□□□□ 0.42
SMARCD3-205ENST00000469154 EIF5BO60841 1220 aaKnown RBP17.68■□□□□ 0.42
SMARCD3-205ENST00000469154 C1orf115Q9H7X2 142 aa17.68■□□□□ 0.42
SMARCD3-205ENST00000469154 TRAK2O60296 914 aa17.68■□□□□ 0.42
SMARCD3-205ENST00000469154 HSP90AB1P08238 724 aaKnown RBP17.67■□□□□ 0.42
SMARCD3-205ENST00000469154 SIRT2Q8IXJ6 389 aa17.66■□□□□ 0.42
SMARCD3-205ENST00000469154 ELL2O00472 640 aaPredicted RBP17.65■□□□□ 0.42
SMARCD3-205ENST00000469154 TBC1D9Q6ZT07 1266 aa17.65■□□□□ 0.42
SMARCD3-205ENST00000469154 C8orf58Q8NAV2 365 aa17.65■□□□□ 0.42
SMARCD3-205ENST00000469154 HAP1P54257 671 aaPredicted RBP17.64■□□□□ 0.42
SMARCD3-205ENST00000469154 CDC45O75419 566 aa17.64■□□□□ 0.41
SMARCD3-205ENST00000469154 TRPM3Q9HCF6 1732 aaPredicted RBP17.64■□□□□ 0.41
SMARCD3-205ENST00000469154 PXDNQ92626 1479 aa17.64■□□□□ 0.41
SMARCD3-205ENST00000469154 PTMSP20962 102 aa17.63■□□□□ 0.41
SMARCD3-205ENST00000469154 KIF2CQ99661 725 aa17.63■□□□□ 0.41
SMARCD3-205ENST00000469154 ISY1Q9ULR0 285 aaKnown RBP17.63■□□□□ 0.41
SMARCD3-205ENST00000469154 SBNO1A3KN83 1393 aa17.62■□□□□ 0.41
SMARCD3-205ENST00000469154 XRCC6P12956 609 aaKnown RBP eCLIP17.62■□□□□ 0.41
SMARCD3-205ENST00000469154 GBP4Q96PP9 640 aa17.62■□□□□ 0.41
SMARCD3-205ENST00000469154 MAP3K19Q56UN5 1328 aa17.62■□□□□ 0.41
SMARCD3-205ENST00000469154 GZF1Q9H116 711 aaPredicted RBP17.61■□□□□ 0.41
SMARCD3-205ENST00000469154 SOS2Q07890 1332 aaPredicted RBP17.61■□□□□ 0.41
SMARCD3-205ENST00000469154 SPATA31A3Q5VYP0 1347 aa17.61■□□□□ 0.41
SMARCD3-205ENST00000469154 RGPD1P0DJD0 1748 aa17.61■□□□□ 0.41
SMARCD3-205ENST00000469154 RAB3GAP1Q15042 981 aa17.61■□□□□ 0.41
SMARCD3-205ENST00000469154 INTS3Q68E01 1043 aaKnown RBP17.61■□□□□ 0.41
SMARCD3-205ENST00000469154 MARF1Q9Y4F3 1742 aaKnown RBP17.61■□□□□ 0.41
SMARCD3-205ENST00000469154 TNS3Q68CZ2 1445 aa17.6■□□□□ 0.41
SMARCD3-205ENST00000469154 FAM83GA6ND36 823 aa17.6■□□□□ 0.41
SMARCD3-205ENST00000469154 K7ELQ4 463 aaPredicted RBP17.6■□□□□ 0.41
SMARCD3-205ENST00000469154 TOM1O60784 492 aa17.6■□□□□ 0.41
SMARCD3-205ENST00000469154 PIP4K2BP78356 416 aa17.6■□□□□ 0.41
SMARCD3-205ENST00000469154 TNPO1Q92973 898 aaKnown RBP17.6■□□□□ 0.41
SMARCD3-205ENST00000469154 DCTPP1Q9H773 170 aa17.6■□□□□ 0.41
SMARCD3-205ENST00000469154 MRE11P49959 708 aa17.6■□□□□ 0.41
SMARCD3-205ENST00000469154 GCP02774 474 aa17.59■□□□□ 0.41
SMARCD3-205ENST00000469154 KIAA0232Q92628 1395 aa17.59■□□□□ 0.41
SMARCD3-205ENST00000469154 KCNH5Q8NCM2 988 aa17.59■□□□□ 0.41
SMARCD3-205ENST00000469154 RGS12O14924 1447 aa17.58■□□□□ 0.41
SMARCD3-205ENST00000469154 ATP10DQ9P241 1426 aa17.58■□□□□ 0.41
SMARCD3-205ENST00000469154 UBAP1LF5GYI3 381 aa17.58■□□□□ 0.41
SMARCD3-205ENST00000469154 HSP90AA1P07900 732 aaKnown RBP17.58■□□□□ 0.41
SMARCD3-205ENST00000469154 AMPHP49418 695 aa17.58■□□□□ 0.41
SMARCD3-205ENST00000469154 CABLES1Q8TDN4 633 aa17.58■□□□□ 0.41
SMARCD3-205ENST00000469154 ALS2Q96Q42 1657 aa17.58■□□□□ 0.41
SMARCD3-205ENST00000469154 USP54Q70EL1 1684 aa17.58■□□□□ 0.4
SMARCD3-205ENST00000469154 ROBO1Q9Y6N7 1651 aa17.58■□□□□ 0.4
SMARCD3-205ENST00000469154 ZBTB7CA1YPR0 619 aa17.58■□□□□ 0.4
SMARCD3-205ENST00000469154 SKOR2Q2VWA4 1001 aaPredicted RBP17.58■□□□□ 0.4
SMARCD3-205ENST00000469154 HSP90AB2PQ58FF8 381 aa17.58■□□□□ 0.4
SMARCD3-205ENST00000469154 PLEKHM2Q8IWE5 1019 aa17.58■□□□□ 0.4
SMARCD3-205ENST00000469154 DCTN1Q14203 1278 aa17.57■□□□□ 0.4
SMARCD3-205ENST00000469154 ANKRD44Q8N8A2 993 aa17.57■□□□□ 0.4
SMARCD3-205ENST00000469154 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms