RNA–Protein interactions for RNA: ENST00000469087.1

RUNX1-213, Transcript of runt related transcription factor 1, humanhuman

TSL 1 (best)

Gene RUNX1, Length 1,790 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-213ENST00000469087 MCM10Q7L590 875 aa16.77■□□□□ 0.28
RUNX1-213ENST00000469087 USP35Q9P2H5 1018 aa16.77■□□□□ 0.28
RUNX1-213ENST00000469087 CRB1P82279 1406 aa16.77■□□□□ 0.27
RUNX1-213ENST00000469087 PLCH1Q4KWH8 1693 aa16.76■□□□□ 0.27
RUNX1-213ENST00000469087 MEGF6O75095 1541 aa16.76■□□□□ 0.27
RUNX1-213ENST00000469087 GNAT3A8MTJ3 354 aa16.76■□□□□ 0.27
RUNX1-213ENST00000469087 C8orf37Q96NL8 207 aa16.76■□□□□ 0.27
RUNX1-213ENST00000469087 LRP6O75581 1613 aa16.76■□□□□ 0.27
RUNX1-213ENST00000469087 IL16Q14005 1332 aa16.75■□□□□ 0.27
RUNX1-213ENST00000469087 NGLY1Q96IV0 654 aa16.75■□□□□ 0.27
RUNX1-213ENST00000469087 SLIT2O94813 1529 aa16.75■□□□□ 0.27
RUNX1-213ENST00000469087 HTATSF1O43719 755 aaKnown RBP16.74■□□□□ 0.27
RUNX1-213ENST00000469087 ZNF530Q6P9A1 599 aaPredicted RBP16.74■□□□□ 0.27
RUNX1-213ENST00000469087 RTF1Q92541 710 aaKnown RBP16.74■□□□□ 0.27
RUNX1-213ENST00000469087 IL17REQ8NFR9 667 aa16.74■□□□□ 0.27
RUNX1-213ENST00000469087 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.74■□□□□ 0.27
RUNX1-213ENST00000469087 MAP3K5Q99683 1374 aa16.73■□□□□ 0.27
RUNX1-213ENST00000469087 IL2RBP14784 551 aa16.73■□□□□ 0.27
RUNX1-213ENST00000469087 CALD1Q05682 793 aaKnown RBP16.73■□□□□ 0.27
RUNX1-213ENST00000469087 AKAP4Q5JQC9 854 aa16.73■□□□□ 0.27
RUNX1-213ENST00000469087 TSR2Q969E8 191 aaKnown RBP16.73■□□□□ 0.27
RUNX1-213ENST00000469087 ZNF853P0CG23 659 aa16.72■□□□□ 0.27
RUNX1-213ENST00000469087 FNBP4Q8N3X1 1017 aaPredicted RBP16.72■□□□□ 0.27
RUNX1-213ENST00000469087 MYH16Q9H6N6 1097 aa16.72■□□□□ 0.27
RUNX1-213ENST00000469087 LGR6Q9HBX8 967 aa16.72■□□□□ 0.27
RUNX1-213ENST00000469087 SPG7Q9UQ90 795 aa16.72■□□□□ 0.27
RUNX1-213ENST00000469087 LAS1LQ9Y4W2 734 aaKnown RBP16.72■□□□□ 0.27
RUNX1-213ENST00000469087 NRAPQ86VF7 1730 aa16.72■□□□□ 0.27
RUNX1-213ENST00000469087 NWD2Q9ULI1 1742 aa16.71■□□□□ 0.27
RUNX1-213ENST00000469087 BCL9LQ86UU0 1499 aa16.71■□□□□ 0.27
RUNX1-213ENST00000469087 C1orf141Q5JVX7 400 aa16.71■□□□□ 0.27
RUNX1-213ENST00000469087 UNC5CLQ8IV45 518 aa16.71■□□□□ 0.27
RUNX1-213ENST00000469087 CFAP44Q96MT7 982 aa16.71■□□□□ 0.27
RUNX1-213ENST00000469087 SUPT16HQ9Y5B9 1047 aaKnown RBP16.71■□□□□ 0.27
RUNX1-213ENST00000469087 PLEKHG2Q9H7P9 1386 aa16.71■□□□□ 0.26
RUNX1-213ENST00000469087 OVOS2A0A0G2JMS6 1433 aa16.7■□□□□ 0.26
RUNX1-213ENST00000469087 GNAI1P63096 354 aa16.7■□□□□ 0.26
RUNX1-213ENST00000469087 MPRIPQ6WCQ1 1025 aa16.7■□□□□ 0.26
RUNX1-213ENST00000469087 IFT57Q9NWB7 429 aa16.7■□□□□ 0.26
RUNX1-213ENST00000469087 SPATA31A1Q5TZJ5 1347 aa16.7■□□□□ 0.26
RUNX1-213ENST00000469087 FANCIQ9NVI1 1328 aa16.7■□□□□ 0.26
RUNX1-213ENST00000469087 CYP27B1O15528 508 aa16.69■□□□□ 0.26
RUNX1-213ENST00000469087 ZCRB1Q8TBF4 217 aaKnown RBP16.69■□□□□ 0.26
RUNX1-213ENST00000469087 PHKG2P15735 406 aa16.69■□□□□ 0.26
RUNX1-213ENST00000469087 MEX3CQ5U5Q3 659 aaKnown RBP16.69■□□□□ 0.26
RUNX1-213ENST00000469087 MBIPQ9NS73 344 aa16.69■□□□□ 0.26
RUNX1-213ENST00000469087 PKD1L3Q7Z443 1732 aa16.68■□□□□ 0.26
RUNX1-213ENST00000469087 CHL1O00533 1208 aa16.68■□□□□ 0.26
RUNX1-213ENST00000469087 IFNL2Q8IZJ0 200 aa16.68■□□□□ 0.26
RUNX1-213ENST00000469087 RCAN3Q9UKA8 241 aa16.68■□□□□ 0.26
RUNX1-213ENST00000469087 SPATA31A5Q5VU36 1347 aa16.68■□□□□ 0.26
RUNX1-213ENST00000469087 SPATA31A7Q8IWB4 1347 aa16.68■□□□□ 0.26
RUNX1-213ENST00000469087 CEMIPQ8WUJ3 1361 aa16.68■□□□□ 0.26
RUNX1-213ENST00000469087 PARP4Q9UKK3 1724 aaKnown RBP16.68■□□□□ 0.26
RUNX1-213ENST00000469087 RNMTO43148 476 aaKnown RBP16.67■□□□□ 0.26
RUNX1-213ENST00000469087 MIS18AQ9NYP9 233 aa16.67■□□□□ 0.26
RUNX1-213ENST00000469087 USP21Q9UK80 565 aa16.67■□□□□ 0.26
RUNX1-213ENST00000469087 EXOSC9Q06265 439 aaKnown RBP16.66■□□□□ 0.26
RUNX1-213ENST00000469087 THRAP3Q9Y2W1 955 aaKnown RBP16.66■□□□□ 0.26
RUNX1-213ENST00000469087 CCDC9Q9Y3X0 531 aaKnown RBP16.66■□□□□ 0.26
RUNX1-213ENST00000469087 DISP2A7MBM2 1401 aa16.66■□□□□ 0.26
RUNX1-213ENST00000469087 TAF7Q15545 349 aaPredicted RBP16.65■□□□□ 0.26
RUNX1-213ENST00000469087 VPS72Q15906 364 aa16.65■□□□□ 0.26
RUNX1-213ENST00000469087 DDX54Q8TDD1 881 aaKnown RBP16.65■□□□□ 0.26
RUNX1-213ENST00000469087 FBXO41Q8TF61 875 aa16.65■□□□□ 0.26
RUNX1-213ENST00000469087 VIRMAQ69YN4 1812 aaKnown RBP16.65■□□□□ 0.26
RUNX1-213ENST00000469087 LRRC37A3O60309 1634 aa16.64■□□□□ 0.25
RUNX1-213ENST00000469087 PCDH11XQ9BZA7 1347 aa16.64■□□□□ 0.25
RUNX1-213ENST00000469087 PCDH11YQ9BZA8 1340 aa16.64■□□□□ 0.25
RUNX1-213ENST00000469087 AFF2P51816 1311 aa16.63■□□□□ 0.25
RUNX1-213ENST00000469087 BARGINQ6ZT62 677 aa16.63■□□□□ 0.25
RUNX1-213ENST00000469087 DCAF5Q96JK2 942 aa16.63■□□□□ 0.25
RUNX1-213ENST00000469087 SHANK3Q9BYB0 1731 aa16.63■□□□□ 0.25
RUNX1-213ENST00000469087 KDM6AO15550 1401 aaPredicted RBP16.63■□□□□ 0.25
RUNX1-213ENST00000469087 ADAMTS7Q9UKP4 1686 aa16.62■□□□□ 0.25
RUNX1-213ENST00000469087 EXOC5O00471 708 aa16.62■□□□□ 0.25
RUNX1-213ENST00000469087 TEFQ10587 303 aa16.62■□□□□ 0.25
RUNX1-213ENST00000469087 NKX1-1Q15270 411 aaPredicted RBP16.62■□□□□ 0.25
RUNX1-213ENST00000469087 TSPYL4Q9UJ04 414 aa16.62■□□□□ 0.25
RUNX1-213ENST00000469087 HSP90AB1P08238 724 aaKnown RBP16.61■□□□□ 0.25
RUNX1-213ENST00000469087 TSPYL6Q8N831 410 aa16.61■□□□□ 0.25
RUNX1-213ENST00000469087 C8orf58Q8NAV2 365 aa16.61■□□□□ 0.25
RUNX1-213ENST00000469087 CDCA7Q9BWT1 371 aaPredicted RBP16.61■□□□□ 0.25
RUNX1-213ENST00000469087 SCN11AQ9UI33 1791 aa16.61■□□□□ 0.25
RUNX1-213ENST00000469087 RNF123Q5XPI4 1314 aa16.61■□□□□ 0.25
RUNX1-213ENST00000469087 ELL2O00472 640 aaPredicted RBP16.61■□□□□ 0.25
RUNX1-213ENST00000469087 BABAM1Q9NWV8 329 aa16.61■□□□□ 0.25
RUNX1-213ENST00000469087 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.6■□□□□ 0.25
RUNX1-213ENST00000469087 WNK3Q9BYP7 1800 aa16.6■□□□□ 0.25
RUNX1-213ENST00000469087 KRT24Q2M2I5 525 aa16.6■□□□□ 0.25
RUNX1-213ENST00000469087 VAMP4O75379 141 aa16.59■□□□□ 0.25
RUNX1-213ENST00000469087 BCAR3O75815 825 aa16.59■□□□□ 0.25
RUNX1-213ENST00000469087 CT47B1P0C2W7 299 aaPredicted RBP16.59■□□□□ 0.25
RUNX1-213ENST00000469087 RARSP54136 660 aaKnown RBP16.59■□□□□ 0.25
RUNX1-213ENST00000469087 FAM98CQ17RN3 349 aaKnown RBP16.59■□□□□ 0.25
RUNX1-213ENST00000469087 NFATC2IPQ8NCF5 419 aa16.59■□□□□ 0.25
RUNX1-213ENST00000469087 SLC52A2Q9HAB3 445 aa16.59■□□□□ 0.25
RUNX1-213ENST00000469087 GTF3C3Q9Y5Q9 886 aa16.59■□□□□ 0.25
RUNX1-213ENST00000469087 BTBD11A6QL63 1104 aa16.59■□□□□ 0.25
RUNX1-213ENST00000469087 DDB1Q16531 1140 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms