RNA–Protein interactions for RNA: ENST00000468958.1

ABCF1-204, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 3

Gene ABCF1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-204ENST00000468958 PARD3Q8TEW0 1356 aa17.31■□□□□ 0.36
ABCF1-204ENST00000468958 TOGARAM1Q9Y4F4 1720 aa17.31■□□□□ 0.36
ABCF1-204ENST00000468958 BCL11BQ9C0K0 894 aaPredicted RBP17.31■□□□□ 0.36
ABCF1-204ENST00000468958 R3HDM1Q15032 1099 aaKnown RBP17.3■□□□□ 0.36
ABCF1-204ENST00000468958 ACSBG1Q96GR2 724 aa17.3■□□□□ 0.36
ABCF1-204ENST00000468958 NCAPD2Q15021 1401 aa17.3■□□□□ 0.36
ABCF1-204ENST00000468958 PROM2Q8N271 834 aa17.29■□□□□ 0.36
ABCF1-204ENST00000468958 POLKQ9UBT6 870 aa17.29■□□□□ 0.36
ABCF1-204ENST00000468958 SRCAPQ6ZRS2 3230 aa17.29■□□□□ 0.36
ABCF1-204ENST00000468958 CASZ1Q86V15 1759 aa17.28■□□□□ 0.36
ABCF1-204ENST00000468958 SMG6Q86US8 1419 aaKnown RBP17.28■□□□□ 0.36
ABCF1-204ENST00000468958 PAPPAQ13219 1627 aa17.28■□□□□ 0.36
ABCF1-204ENST00000468958 ITGB4P16144 1822 aa17.28■□□□□ 0.36
ABCF1-204ENST00000468958 LY75O60449 1722 aa17.27■□□□□ 0.36
ABCF1-204ENST00000468958 PLSCR1O15162 318 aa17.27■□□□□ 0.36
ABCF1-204ENST00000468958 TNNT2P45379 298 aaPredicted RBP17.27■□□□□ 0.36
ABCF1-204ENST00000468958 WASHC2AQ641Q2 1341 aa17.26■□□□□ 0.35
ABCF1-204ENST00000468958 PPM1GO15355 546 aaPredicted RBP17.26■□□□□ 0.35
ABCF1-204ENST00000468958 DDX54Q8TDD1 881 aaKnown RBP17.26■□□□□ 0.35
ABCF1-204ENST00000468958 ANO8Q9HCE9 1232 aaPredicted RBP17.25■□□□□ 0.35
ABCF1-204ENST00000468958 TUBGCP6Q96RT7 1819 aa17.25■□□□□ 0.35
ABCF1-204ENST00000468958 NSD2O96028 1365 aa17.24■□□□□ 0.35
ABCF1-204ENST00000468958 AMER1Q5JTC6 1135 aaPredicted RBP17.23■□□□□ 0.35
ABCF1-204ENST00000468958 ZCRB1Q8TBF4 217 aaKnown RBP17.23■□□□□ 0.35
ABCF1-204ENST00000468958 PER1O15534 1290 aaPredicted RBP17.22■□□□□ 0.35
ABCF1-204ENST00000468958 EYA1Q99502 592 aa17.22■□□□□ 0.35
ABCF1-204ENST00000468958 EIF4A2Q14240 407 aaKnown RBP17.21■□□□□ 0.35
ABCF1-204ENST00000468958 TXNRD1Q16881 649 aa17.21■□□□□ 0.35
ABCF1-204ENST00000468958 TATP17735 454 aaPredicted RBP17.19■□□□□ 0.34
ABCF1-204ENST00000468958 RAPGEF4Q8WZA2 1011 aa17.19■□□□□ 0.34
ABCF1-204ENST00000468958 PDGFDQ9GZP0 370 aaPredicted RBP17.19■□□□□ 0.34
ABCF1-204ENST00000468958 TAF1LQ8IZX4 1826 aa17.19■□□□□ 0.34
ABCF1-204ENST00000468958 QSER1Q2KHR3 1735 aa17.18■□□□□ 0.34
ABCF1-204ENST00000468958 CYP27B1O15528 508 aa17.18■□□□□ 0.34
ABCF1-204ENST00000468958 KNSTRNQ9Y448 316 aa17.18■□□□□ 0.34
ABCF1-204ENST00000468958 VIRMAQ69YN4 1812 aaKnown RBP17.17■□□□□ 0.34
ABCF1-204ENST00000468958 PRIM1P49642 420 aaKnown RBP17.17■□□□□ 0.34
ABCF1-204ENST00000468958 MORC1Q86VD1 984 aa17.17■□□□□ 0.34
ABCF1-204ENST00000468958 LRRC4BQ9NT99 713 aa17.17■□□□□ 0.34
ABCF1-204ENST00000468958 NBPF14Q5TI25 921 aa17.16■□□□□ 0.34
ABCF1-204ENST00000468958 C5P01031 1676 aa17.15■□□□□ 0.34
ABCF1-204ENST00000468958 IGSF1Q8N6C5 1336 aa17.15■□□□□ 0.34
ABCF1-204ENST00000468958 PCDH11XQ9BZA7 1347 aa17.15■□□□□ 0.34
ABCF1-204ENST00000468958 PCDH11YQ9BZA8 1340 aa17.15■□□□□ 0.34
ABCF1-204ENST00000468958 KCNQ4P56696 695 aa17.14■□□□□ 0.33
ABCF1-204ENST00000468958 SYTL4Q96C24 671 aaPredicted RBP17.14■□□□□ 0.33
ABCF1-204ENST00000468958 CC2D1BQ5T0F9 858 aaKnown RBP17.13■□□□□ 0.33
ABCF1-204ENST00000468958 ZNF827Q17R98 1081 aa17.12■□□□□ 0.33
ABCF1-204ENST00000468958 COL24A1Q17RW2 1714 aa17.11■□□□□ 0.33
ABCF1-204ENST00000468958 SLC15A2Q16348 729 aa17.11■□□□□ 0.33
ABCF1-204ENST00000468958 AEBP1Q8IUX7 1158 aa17.11■□□□□ 0.33
ABCF1-204ENST00000468958 COL3A1P02461 1466 aaPredicted RBP17.11■□□□□ 0.33
ABCF1-204ENST00000468958 IL13P35225 146 aa17.1■□□□□ 0.33
ABCF1-204ENST00000468958 SCN11AQ9UI33 1791 aa17.1■□□□□ 0.33
ABCF1-204ENST00000468958 CNGB1Q14028 1251 aaPredicted RBP17.09■□□□□ 0.33
ABCF1-204ENST00000468958 NKX1-1Q15270 411 aaPredicted RBP17.09■□□□□ 0.33
ABCF1-204ENST00000468958 NPC1L1Q9UHC9 1359 aa17.09■□□□□ 0.33
ABCF1-204ENST00000468958 PHKG2P15735 406 aa17.08■□□□□ 0.32
ABCF1-204ENST00000468958 MTHFSP49914 203 aa17.08■□□□□ 0.32
ABCF1-204ENST00000468958 STK32BQ9NY57 414 aa17.08■□□□□ 0.32
ABCF1-204ENST00000468958 KDRP35968 1356 aa17.07■□□□□ 0.32
ABCF1-204ENST00000468958 AKT1S1Q96B36 256 aa17.07■□□□□ 0.32
ABCF1-204ENST00000468958 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.07■□□□□ 0.322e-6■■■■■ 39.3
ABCF1-204ENST00000468958 SPG7Q9UQ90 795 aa17.07■□□□□ 0.32
ABCF1-204ENST00000468958 NPM3O75607 178 aaKnown RBP17.06■□□□□ 0.32
ABCF1-204ENST00000468958 MPRIPQ6WCQ1 1025 aa17.06■□□□□ 0.32
ABCF1-204ENST00000468958 UBR3Q6ZT12 1888 aa17.05■□□□□ 0.32
ABCF1-204ENST00000468958 KDM6AO15550 1401 aaPredicted RBP17.05■□□□□ 0.32
ABCF1-204ENST00000468958 C4BP0C0L5 1744 aa17.05■□□□□ 0.32
ABCF1-204ENST00000468958 ZBTB7AO95365 584 aa17.05■□□□□ 0.32
ABCF1-204ENST00000468958 SLC27A3Q5K4L6 730 aa17.05■□□□□ 0.32
ABCF1-204ENST00000468958 PIGBQ92521 554 aa17.05■□□□□ 0.32
ABCF1-204ENST00000468958 PLEKHG2Q9H7P9 1386 aa17.04■□□□□ 0.32
ABCF1-204ENST00000468958 SULT6B1Q6IMI4 303 aa17.04■□□□□ 0.32
ABCF1-204ENST00000468958 PALLDQ8WX93 1383 aa17.03■□□□□ 0.32
ABCF1-204ENST00000468958 PTGER2P43116 358 aa17.03■□□□□ 0.32
ABCF1-204ENST00000468958 IFNL2Q8IZJ0 200 aa17.03■□□□□ 0.32
ABCF1-204ENST00000468958 SPON1Q9HCB6 807 aa17.03■□□□□ 0.32
ABCF1-204ENST00000468958 CCNL1Q9UK58 526 aaPredicted RBP17.03■□□□□ 0.32
ABCF1-204ENST00000468958 COL5A3P25940 1745 aaPredicted RBP17.03■□□□□ 0.32
ABCF1-204ENST00000468958 ADAMTS7Q9UKP4 1686 aa17.03■□□□□ 0.32
ABCF1-204ENST00000468958 PNPLA7Q6ZV29 1317 aa17.02■□□□□ 0.32
ABCF1-204ENST00000468958 ATF5Q9Y2D1 282 aaPredicted RBP17.02■□□□□ 0.32
ABCF1-204ENST00000468958 SGIP1Q9BQI5 828 aa17.01■□□□□ 0.31
ABCF1-204ENST00000468958 ZNF831Q5JPB2 1677 aa17.01■□□□□ 0.31
ABCF1-204ENST00000468958 HMOX1P09601 288 aa17■□□□□ 0.31
ABCF1-204ENST00000468958 ZNF530Q6P9A1 599 aaPredicted RBP16.99■□□□□ 0.31
ABCF1-204ENST00000468958 ASAP1Q9ULH1 1129 aa16.99■□□□□ 0.31
ABCF1-204ENST00000468958 TJP1Q07157 1748 aa16.99■□□□□ 0.31
ABCF1-204ENST00000468958 PLEKHO1Q53GL0 409 aaPredicted RBP16.98■□□□□ 0.31
ABCF1-204ENST00000468958 AMIGO3Q86WK7 504 aa16.98■□□□□ 0.31
ABCF1-204ENST00000468958 DIAPH1O60610 1272 aaKnown RBP16.97■□□□□ 0.31
ABCF1-204ENST00000468958 MTFR1LQ9H019 292 aa16.97■□□□□ 0.31
ABCF1-204ENST00000468958 ATG3Q9NT62 314 aa16.97■□□□□ 0.31
ABCF1-204ENST00000468958 TMOD3Q9NYL9 352 aa16.97■□□□□ 0.31
ABCF1-204ENST00000468958 SIPA1L3O60292 1781 aaPredicted RBP16.97■□□□□ 0.31
ABCF1-204ENST00000468958 MYH14Q7Z406 1995 aaKnown RBP16.97■□□□□ 0.31
ABCF1-204ENST00000468958 AMOTQ4VCS5 1084 aa16.96■□□□□ 0.31
ABCF1-204ENST00000468958 SMIM5Q71RC9 77 aa16.96■□□□□ 0.31
ABCF1-204ENST00000468958 CICQ96RK0 1608 aaPredicted RBP16.96■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 126.8 ms