RNA–Protein interactions for RNA: ENST00000468878.1

TRIM46-207, Transcript of tripartite motif containing 46, humanhuman

TSL 2

Gene TRIM46, Length 3,318 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM46-207ENST00000468878 GSPT1P15170 499 aaKnown RBP21.51■■□□□ 1.03
TRIM46-207ENST00000468878 AIMP1Q12904 312 aaKnown RBP21.51■■□□□ 1.03
TRIM46-207ENST00000468878 NLRP1Q9C000 1473 aa21.51■■□□□ 1.03
TRIM46-207ENST00000468878 ZNF853P0CG23 659 aa21.5■■□□□ 1.03
TRIM46-207ENST00000468878 HDGFL1Q5TGJ6 251 aa21.5■■□□□ 1.03
TRIM46-207ENST00000468878 PLEKHM2Q8IWE5 1019 aa21.5■■□□□ 1.03
TRIM46-207ENST00000468878 HMMRO75330 724 aa21.5■■□□□ 1.03
TRIM46-207ENST00000468878 HAP1P54257 671 aaPredicted RBP21.5■■□□□ 1.03
TRIM46-207ENST00000468878 MPRIPQ6WCQ1 1025 aa21.5■■□□□ 1.03
TRIM46-207ENST00000468878 PANK2Q9BZ23 570 aa21.5■■□□□ 1.03
TRIM46-207ENST00000468878 COL3A1P02461 1466 aaPredicted RBP21.5■■□□□ 1.03
TRIM46-207ENST00000468878 CCDC9Q9Y3X0 531 aaKnown RBP21.5■■□□□ 1.03
TRIM46-207ENST00000468878 CHL1O00533 1208 aa21.49■■□□□ 1.03
TRIM46-207ENST00000468878 CEP85Q6P2H3 762 aa21.49■■□□□ 1.03
TRIM46-207ENST00000468878 ANO2Q9NQ90 1003 aa21.49■■□□□ 1.03
TRIM46-207ENST00000468878 NEURL4Q96JN8 1562 aa21.49■■□□□ 1.03
TRIM46-207ENST00000468878 RICTORQ6R327 1708 aa21.49■■□□□ 1.03
TRIM46-207ENST00000468878 PHAXQ9H814 394 aaKnown RBP21.49■■□□□ 1.03
TRIM46-207ENST00000468878 SDSP20132 328 aa21.48■■□□□ 1.03
TRIM46-207ENST00000468878 TEFQ10587 303 aa21.48■■□□□ 1.03
TRIM46-207ENST00000468878 NUTM1Q86Y26 1132 aa21.48■■□□□ 1.03
TRIM46-207ENST00000468878 ARHGAP45Q92619 1136 aa21.48■■□□□ 1.03
TRIM46-207ENST00000468878 ANTXR1Q9H6X2 564 aa21.48■■□□□ 1.03
TRIM46-207ENST00000468878 MAP2P11137 1827 aaKnown RBP21.47■■□□□ 1.03
TRIM46-207ENST00000468878 CHAMP1Q96JM3 812 aa21.47■■□□□ 1.03
TRIM46-207ENST00000468878 LARP6Q9BRS8 491 aaKnown RBP21.47■■□□□ 1.03
TRIM46-207ENST00000468878 GNAT3A8MTJ3 354 aa21.47■■□□□ 1.03
TRIM46-207ENST00000468878 SSFA2P28290 1259 aa21.47■■□□□ 1.03
TRIM46-207ENST00000468878 ZC3H6P61129 1189 aaKnown RBP21.47■■□□□ 1.03
TRIM46-207ENST00000468878 FLIIQ13045 1269 aa21.47■■□□□ 1.03
TRIM46-207ENST00000468878 GAS2L2Q8NHY3 880 aa21.47■■□□□ 1.03
TRIM46-207ENST00000468878 LRRFIP2Q9Y608 721 aaKnown RBP21.47■■□□□ 1.03
TRIM46-207ENST00000468878 TNPO1Q92973 898 aaKnown RBP21.47■■□□□ 1.03
TRIM46-207ENST00000468878 ABCC4O15439 1325 aa21.46■■□□□ 1.03
TRIM46-207ENST00000468878 SURF6O75683 361 aaKnown RBP21.45■■□□□ 1.03
TRIM46-207ENST00000468878 GNAI2P04899 355 aa21.44■■□□□ 1.02
TRIM46-207ENST00000468878 ANKRD44Q8N8A2 993 aa21.44■■□□□ 1.02
TRIM46-207ENST00000468878 DCTPP1Q9H773 170 aa21.44■■□□□ 1.02
TRIM46-207ENST00000468878 LGR6Q9HBX8 967 aa21.44■■□□□ 1.02
TRIM46-207ENST00000468878 INTS3Q68E01 1043 aaKnown RBP21.44■■□□□ 1.02
TRIM46-207ENST00000468878 ATP7BP35670 1465 aa21.43■■□□□ 1.02
TRIM46-207ENST00000468878 K7ELQ4 463 aaPredicted RBP21.43■■□□□ 1.02
TRIM46-207ENST00000468878 CCDC30Q5VVM6 783 aa21.43■■□□□ 1.02
TRIM46-207ENST00000468878 MCTP1Q6DN14 999 aa21.43■■□□□ 1.02
TRIM46-207ENST00000468878 CPSF1Q10570 1443 aaKnown RBP21.43■■□□□ 1.02
TRIM46-207ENST00000468878 KCNQ3O43525 872 aa21.43■■□□□ 1.02
TRIM46-207ENST00000468878 UBTFL1P0CB47 393 aaPredicted RBP21.43■■□□□ 1.02
TRIM46-207ENST00000468878 TTC22Q5TAA0 569 aa21.43■■□□□ 1.02
TRIM46-207ENST00000468878 PNMA6EA0A0J9YXQ4 647 aa21.42■■□□□ 1.02
TRIM46-207ENST00000468878 NEK4P51957 841 aa21.42■■□□□ 1.02
TRIM46-207ENST00000468878 DDX54Q8TDD1 881 aaKnown RBP21.42■■□□□ 1.02
TRIM46-207ENST00000468878 GBP4Q96PP9 640 aa21.42■■□□□ 1.02
TRIM46-207ENST00000468878 UPF3BQ9BZI7 483 aaKnown RBP21.42■■□□□ 1.02
TRIM46-207ENST00000468878 RPAP2Q8IXW5 612 aaPredicted RBP21.42■■□□□ 1.02
TRIM46-207ENST00000468878 PHF8Q9UPP1 1060 aa21.42■■□□□ 1.02
TRIM46-207ENST00000468878 DDX49Q9Y6V7 483 aaKnown RBP21.42■■□□□ 1.02
TRIM46-207ENST00000468878 ZNF530Q6P9A1 599 aaPredicted RBP21.42■■□□□ 1.02
TRIM46-207ENST00000468878 PLEKHG3A1L390 1219 aa21.41■■□□□ 1.02
TRIM46-207ENST00000468878 HOXC9P31274 260 aa21.41■■□□□ 1.02
TRIM46-207ENST00000468878 PIP4K2AP48426 406 aaPredicted RBP21.41■■□□□ 1.02
TRIM46-207ENST00000468878 RIMBP3CA6NJZ7 1639 aa21.41■■□□□ 1.02
TRIM46-207ENST00000468878 RIMBP3BA6NNM3 1639 aa21.41■■□□□ 1.02
TRIM46-207ENST00000468878 RIMBP3Q9UFD9 1639 aa21.41■■□□□ 1.02
TRIM46-207ENST00000468878 GOLGA6L22H0YM25 854 aa21.41■■□□□ 1.02
TRIM46-207ENST00000468878 CSB-PGBD3P0DP91 1061 aa21.41■■□□□ 1.02
TRIM46-207ENST00000468878 IL17REQ8NFR9 667 aa21.4■■□□□ 1.02
TRIM46-207ENST00000468878 ORAI2Q96SN7 254 aa21.4■■□□□ 1.02
TRIM46-207ENST00000468878 JARID2Q92833 1246 aaPredicted RBP21.4■■□□□ 1.02
TRIM46-207ENST00000468878 DDX17Q92841 729 aaKnown RBP21.4■■□□□ 1.02
TRIM46-207ENST00000468878 TAF7Q15545 349 aaPredicted RBP21.38■■□□□ 1.01
TRIM46-207ENST00000468878 NCBP3Q53F19 620 aaKnown RBP21.38■■□□□ 1.01
TRIM46-207ENST00000468878 SRGAP3O43295 1099 aa21.37■■□□□ 1.01
TRIM46-207ENST00000468878 L1TD1Q5T7N2 865 aaKnown RBP21.37■■□□□ 1.01
TRIM46-207ENST00000468878 ZGPATQ8N5A5 531 aaKnown RBP21.37■■□□□ 1.01
TRIM46-207ENST00000468878 ZNF330Q9Y3S2 320 aaPredicted RBP21.37■■□□□ 1.01
TRIM46-207ENST00000468878 PKP1Q13835 747 aa21.37■■□□□ 1.01
TRIM46-207ENST00000468878 LRRCC1Q9C099 1032 aa21.37■■□□□ 1.01
TRIM46-207ENST00000468878 A0A0G2JS52 829 aa21.37■■□□□ 1.01
TRIM46-207ENST00000468878 CCT4P50991 539 aaKnown RBP21.37■■□□□ 1.01
TRIM46-207ENST00000468878 NBPF6Q5VWK0 638 aa21.37■■□□□ 1.01
TRIM46-207ENST00000468878 FAM43AQ8N2R8 423 aa21.37■■□□□ 1.01
TRIM46-207ENST00000468878 NBPF4Q96M43 638 aa21.37■■□□□ 1.01
TRIM46-207ENST00000468878 USP6P35125 1406 aa21.36■■□□□ 1.01
TRIM46-207ENST00000468878 FLT4P35916 1363 aa21.36■■□□□ 1.01
TRIM46-207ENST00000468878 PI4KAP2A4QPH2 592 aa21.36■■□□□ 1.01
TRIM46-207ENST00000468878 PI4KAP1Q8N8J0 262 aa21.36■■□□□ 1.01
TRIM46-207ENST00000468878 CHPF2Q9P2E5 772 aa21.36■■□□□ 1.01
TRIM46-207ENST00000468878 TAOK2Q9UL54 1235 aa21.36■■□□□ 1.01
TRIM46-207ENST00000468878 AATKQ6ZMQ8 1374 aa21.36■■□□□ 1.01
TRIM46-207ENST00000468878 NLRP2Q9NX02 1062 aa21.36■■□□□ 1.01
TRIM46-207ENST00000468878 C9orf78Q9NZ63 289 aaPredicted RBP21.36■■□□□ 1.01
TRIM46-207ENST00000468878 ST18O60284 1047 aa21.35■■□□□ 1.01
TRIM46-207ENST00000468878 C1orf141Q5JVX7 400 aa21.35■■□□□ 1.01
TRIM46-207ENST00000468878 MYL6BP14649 208 aa21.35■■□□□ 1.01
TRIM46-207ENST00000468878 RBM25P49756 843 aaKnown RBP21.35■■□□□ 1.01
TRIM46-207ENST00000468878 SIL1Q9H173 461 aa21.35■■□□□ 1.01
TRIM46-207ENST00000468878 DIP2BQ9P265 1576 aa21.34■■□□□ 1.01
TRIM46-207ENST00000468878 BTBD11A6QL63 1104 aa21.34■■□□□ 1.01
TRIM46-207ENST00000468878 DDX11L8A8MPP1 907 aa21.34■■□□□ 1.01
TRIM46-207ENST00000468878 XRCC6P12956 609 aaKnown RBP eCLIP21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms