RNA–Protein interactions for RNA: ENST00000468476.1

PABPC4-209, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 2

Gene PABPC4, Length 3,592 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-209ENST00000468476 PHF8Q9UPP1 1060 aa11.15□□□□□ -0.63
PABPC4-209ENST00000468476 ZNF771Q7L3S4 317 aaPredicted RBP11.14□□□□□ -0.63
PABPC4-209ENST00000468476 CSB-PGBD3P0DP91 1061 aa11.14□□□□□ -0.63
PABPC4-209ENST00000468476 LMOD3Q0VAK6 560 aa11.14□□□□□ -0.63
PABPC4-209ENST00000468476 UTP14CQ5TAP6 766 aaKnown RBP11.14□□□□□ -0.63
PABPC4-209ENST00000468476 ANKRD45Q5TZF3 282 aa11.14□□□□□ -0.63
PABPC4-209ENST00000468476 TBX22Q9Y458 520 aa11.14□□□□□ -0.63
PABPC4-209ENST00000468476 ARHGEF28Q8N1W1 1705 aaKnown RBP11.14□□□□□ -0.63
PABPC4-209ENST00000468476 IFT172Q9UG01 1749 aa11.14□□□□□ -0.63
PABPC4-209ENST00000468476 ZC3H13Q5T200 1668 aaKnown RBP11.14□□□□□ -0.63
PABPC4-209ENST00000468476 TRAK2O60296 914 aa11.13□□□□□ -0.63
PABPC4-209ENST00000468476 MFAP1P55081 439 aaKnown RBP11.13□□□□□ -0.63
PABPC4-209ENST00000468476 MTERF4Q7Z6M4 381 aaKnown RBP11.13□□□□□ -0.63
PABPC4-209ENST00000468476 ZBTB9Q96C00 473 aa11.13□□□□□ -0.63
PABPC4-209ENST00000468476 UPF2Q9HAU5 1272 aaKnown RBP11.13□□□□□ -0.63
PABPC4-209ENST00000468476 ARHGEF40Q8TER5 1519 aa11.13□□□□□ -0.63
PABPC4-209ENST00000468476 ZSCAN20P17040 1043 aaPredicted RBP11.12□□□□□ -0.63
PABPC4-209ENST00000468476 DDX19BQ9UMR2 479 aa11.12□□□□□ -0.63
PABPC4-209ENST00000468476 INSRP06213 1382 aa11.12□□□□□ -0.63
PABPC4-209ENST00000468476 OFD1O75665 1012 aa11.12□□□□□ -0.63
PABPC4-209ENST00000468476 LRRC59Q96AG4 307 aaKnown RBP11.12□□□□□ -0.63
PABPC4-209ENST00000468476 SETD1BQ9UPS6 1966 aaKnown RBP11.12□□□□□ -0.63
PABPC4-209ENST00000468476 EDC4Q6P2E9 1401 aaKnown RBP11.11□□□□□ -0.63
PABPC4-209ENST00000468476 F6X3S4 739 aa11.11□□□□□ -0.63
PABPC4-209ENST00000468476 KIF20AO95235 890 aa11.11□□□□□ -0.63
PABPC4-209ENST00000468476 SLC4A2P04920 1241 aa11.11□□□□□ -0.63
PABPC4-209ENST00000468476 CCDC27Q2M243 656 aa11.11□□□□□ -0.63
PABPC4-209ENST00000468476 KCNJ4P48050 445 aa11.11□□□□□ -0.63
PABPC4-209ENST00000468476 CNPY4Q8N129 248 aa11.11□□□□□ -0.63
PABPC4-209ENST00000468476 CABLES1Q8TDN4 633 aa11.11□□□□□ -0.63
PABPC4-209ENST00000468476 EYA1Q99502 592 aa11.11□□□□□ -0.63
PABPC4-209ENST00000468476 MTHFSDQ2M296 383 aaKnown RBP11.1□□□□□ -0.63
PABPC4-209ENST00000468476 SAMD1Q6SPF0 538 aaPredicted RBP11.1□□□□□ -0.63
PABPC4-209ENST00000468476 CD163L1Q9NR16 1453 aa11.1□□□□□ -0.63
PABPC4-209ENST00000468476 FSD2A1L4K1 749 aa11.1□□□□□ -0.63
PABPC4-209ENST00000468476 CCDC94Q9BW85 323 aaPredicted RBP11.1□□□□□ -0.63
PABPC4-209ENST00000468476 KIF16BQ96L93 1317 aa11.1□□□□□ -0.63
PABPC4-209ENST00000468476 AGLP35573 1532 aa11.1□□□□□ -0.63
PABPC4-209ENST00000468476 ZSCAN30Q86W11 494 aa11.1□□□□□ -0.63
PABPC4-209ENST00000468476 LETM1O95202 739 aaPredicted RBP11.09□□□□□ -0.63
PABPC4-209ENST00000468476 DNAJC5Q9H3Z4 198 aa11.09□□□□□ -0.63
PABPC4-209ENST00000468476 PATL2C9JE40 543 aaKnown RBP11.09□□□□□ -0.63
PABPC4-209ENST00000468476 VAMP4O75379 141 aa11.09□□□□□ -0.63
PABPC4-209ENST00000468476 ATF3P18847 181 aa11.09□□□□□ -0.63
PABPC4-209ENST00000468476 MCM4P33991 863 aa11.09□□□□□ -0.63
PABPC4-209ENST00000468476 CHMP4CQ96CF2 233 aa11.09□□□□□ -0.63
PABPC4-209ENST00000468476 STK31Q9BXU1 1019 aa11.09□□□□□ -0.63
PABPC4-209ENST00000468476 CPS1P31327 1500 aa11.09□□□□□ -0.63
PABPC4-209ENST00000468476 ADAMTS13Q76LX8 1427 aa11.09□□□□□ -0.63
PABPC4-209ENST00000468476 PLEKHG1Q9ULL1 1385 aa11.09□□□□□ -0.63
PABPC4-209ENST00000468476 SPDYE4A6NLX3 237 aa11.08□□□□□ -0.63
PABPC4-209ENST00000468476 NLRP2Q9NX02 1062 aa11.08□□□□□ -0.63
PABPC4-209ENST00000468476 KDM2BQ8NHM5 1336 aa11.08□□□□□ -0.64
PABPC4-209ENST00000468476 SEC24BO95487 1268 aa11.08□□□□□ -0.64
PABPC4-209ENST00000468476 FKBP5Q13451 457 aaPredicted RBP11.08□□□□□ -0.64
PABPC4-209ENST00000468476 PTPRUQ92729 1446 aa11.08□□□□□ -0.64
PABPC4-209ENST00000468476 GTPBP4Q9BZE4 634 aaKnown RBP11.08□□□□□ -0.64
PABPC4-209ENST00000468476 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.07□□□□□ -0.64
PABPC4-209ENST00000468476 PLEKHG3A1L390 1219 aa11.07□□□□□ -0.64
PABPC4-209ENST00000468476 ANXA1P04083 346 aa11.07□□□□□ -0.64
PABPC4-209ENST00000468476 CFAP44Q96MT7 982 aa11.07□□□□□ -0.64
PABPC4-209ENST00000468476 SPATA31D1Q6ZQQ2 1576 aa11.07□□□□□ -0.64
PABPC4-209ENST00000468476 NEURL4Q96JN8 1562 aa11.07□□□□□ -0.64
PABPC4-209ENST00000468476 MPRIPQ6WCQ1 1025 aa11.07□□□□□ -0.64
PABPC4-209ENST00000468476 CHRNA2Q15822 529 aa11.07□□□□□ -0.64
PABPC4-209ENST00000468476 IFT57Q9NWB7 429 aa11.07□□□□□ -0.64
PABPC4-209ENST00000468476 TEFQ10587 303 aa11.06□□□□□ -0.64
PABPC4-209ENST00000468476 NLRP1Q9C000 1473 aa11.06□□□□□ -0.64
PABPC4-209ENST00000468476 RGS22Q8NE09 1264 aa11.06□□□□□ -0.64
PABPC4-209ENST00000468476 TSC1Q92574 1164 aa11.06□□□□□ -0.64
PABPC4-209ENST00000468476 MYO3AQ8NEV4 1616 aa11.05□□□□□ -0.64
PABPC4-209ENST00000468476 TRERF1Q96PN7 1200 aa11.05□□□□□ -0.64
PABPC4-209ENST00000468476 PHF23Q9BUL5 403 aaPredicted RBP11.05□□□□□ -0.64
PABPC4-209ENST00000468476 FOXD4L1Q9NU39 408 aa11.05□□□□□ -0.64
PABPC4-209ENST00000468476 DYNC1I1O14576 645 aa11.05□□□□□ -0.64
PABPC4-209ENST00000468476 HOXC9P31274 260 aa11.05□□□□□ -0.64
PABPC4-209ENST00000468476 C8orf34Q49A92 452 aa11.05□□□□□ -0.64
PABPC4-209ENST00000468476 ZNF530Q6P9A1 599 aaPredicted RBP11.05□□□□□ -0.64
PABPC4-209ENST00000468476 ZNF330Q9Y3S2 320 aaPredicted RBP11.05□□□□□ -0.64
PABPC4-209ENST00000468476 KRT28Q7Z3Y7 464 aa11.04□□□□□ -0.64
PABPC4-209ENST00000468476 MRPL50Q8N5N7 158 aaKnown RBP11.04□□□□□ -0.64
PABPC4-209ENST00000468476 ATP7BP35670 1465 aa11.04□□□□□ -0.64
PABPC4-209ENST00000468476 TULP1O00294 542 aaPredicted RBP11.04□□□□□ -0.64
PABPC4-209ENST00000468476 AIMP1Q12904 312 aaKnown RBP11.04□□□□□ -0.64
PABPC4-209ENST00000468476 G2E3Q7L622 706 aa11.04□□□□□ -0.64
PABPC4-209ENST00000468476 API5Q9BZZ5 524 aaKnown RBP11.04□□□□□ -0.64
PABPC4-209ENST00000468476 SMARCA5O60264 1052 aaPredicted RBP11.03□□□□□ -0.64
PABPC4-209ENST00000468476 USP6P35125 1406 aa11.03□□□□□ -0.64
PABPC4-209ENST00000468476 TAF3Q5VWG9 929 aa11.03□□□□□ -0.64
PABPC4-209ENST00000468476 GAS2L2Q8NHY3 880 aa11.03□□□□□ -0.64
PABPC4-209ENST00000468476 HDAC5Q9UQL6 1122 aa11.03□□□□□ -0.64
PABPC4-209ENST00000468476 C1orf141Q5JVX7 400 aa11.03□□□□□ -0.64
PABPC4-209ENST00000468476 CPSF1Q10570 1443 aaKnown RBP11.03□□□□□ -0.64
PABPC4-209ENST00000468476 GNAT3A8MTJ3 354 aa11.03□□□□□ -0.64
PABPC4-209ENST00000468476 FAM135BQ49AJ0 1406 aa11.03□□□□□ -0.64
PABPC4-209ENST00000468476 FAM177BA6PVY3 158 aa11.02□□□□□ -0.64
PABPC4-209ENST00000468476 NASPP49321 788 aaPredicted RBP11.02□□□□□ -0.64
PABPC4-209ENST00000468476 SIRT1Q96EB6 747 aa11.02□□□□□ -0.64
PABPC4-209ENST00000468476 TNNT3P45378 269 aaPredicted RBP11.02□□□□□ -0.65
PABPC4-209ENST00000468476 IL16Q14005 1332 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms