RNA–Protein interactions for RNA: ENST00000468166.5

SND1-206, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-206ENST00000468166 PLCH1Q4KWH8 1693 aa10.37□□□□□ -0.75
SND1-206ENST00000468166 MAP3K5Q99683 1374 aa10.37□□□□□ -0.75
SND1-206ENST00000468166 PKD1L3Q7Z443 1732 aa10.36□□□□□ -0.75
SND1-206ENST00000468166 FAM83GA6ND36 823 aa10.36□□□□□ -0.75
SND1-206ENST00000468166 RRP1P56182 461 aaKnown RBP10.36□□□□□ -0.75
SND1-206ENST00000468166 IRX6P78412 446 aaPredicted RBP10.36□□□□□ -0.75
SND1-206ENST00000468166 RTF1Q92541 710 aaKnown RBP10.36□□□□□ -0.75
SND1-206ENST00000468166 TSR2Q969E8 191 aaKnown RBP10.36□□□□□ -0.75
SND1-206ENST00000468166 IFT57Q9NWB7 429 aa10.36□□□□□ -0.75
SND1-206ENST00000468166 NLRP2Q9NX02 1062 aa10.36□□□□□ -0.75
SND1-206ENST00000468166 GNAI1P63096 354 aa10.35□□□□□ -0.75
SND1-206ENST00000468166 LAS1LQ9Y4W2 734 aaKnown RBP10.35□□□□□ -0.75
SND1-206ENST00000468166 WDR17Q8IZU2 1322 aa10.34□□□□□ -0.75
SND1-206ENST00000468166 GNAT3A8MTJ3 354 aa10.34□□□□□ -0.75
SND1-206ENST00000468166 HTATSF1O43719 755 aaKnown RBP10.34□□□□□ -0.75
SND1-206ENST00000468166 CT47B1P0C2W7 299 aaPredicted RBP10.34□□□□□ -0.75
SND1-206ENST00000468166 DCTN1Q14203 1278 aa10.34□□□□□ -0.75
SND1-206ENST00000468166 AMOTQ4VCS5 1084 aa10.34□□□□□ -0.75
SND1-206ENST00000468166 PLEKHO1Q53GL0 409 aaPredicted RBP10.34□□□□□ -0.75
SND1-206ENST00000468166 MCM10Q7L590 875 aa10.34□□□□□ -0.75
SND1-206ENST00000468166 CERKQ8TCT0 537 aa10.34□□□□□ -0.75
SND1-206ENST00000468166 RAPGEF4Q8WZA2 1011 aa10.34□□□□□ -0.75
SND1-206ENST00000468166 PLEKHG2Q9H7P9 1386 aa10.34□□□□□ -0.75
SND1-206ENST00000468166 MEGF6O75095 1541 aa10.33□□□□□ -0.76
SND1-206ENST00000468166 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.33□□□□□ -0.76
SND1-206ENST00000468166 CFAP44Q96MT7 982 aa10.33□□□□□ -0.76
SND1-206ENST00000468166 WNK3Q9BYP7 1800 aa10.33□□□□□ -0.76
SND1-206ENST00000468166 NRAPQ86VF7 1730 aa10.33□□□□□ -0.76
SND1-206ENST00000468166 CRB1P82279 1406 aa10.33□□□□□ -0.76
SND1-206ENST00000468166 SCN11AQ9UI33 1791 aa10.32□□□□□ -0.76
SND1-206ENST00000468166 ZNF853P0CG23 659 aa10.32□□□□□ -0.76
SND1-206ENST00000468166 TATP17735 454 aaPredicted RBP10.32□□□□□ -0.76
SND1-206ENST00000468166 EXOSC9Q06265 439 aaKnown RBP10.32□□□□□ -0.76
SND1-206ENST00000468166 ERICH6BQ5W0A0 696 aa10.32□□□□□ -0.76
SND1-206ENST00000468166 ZNF530Q6P9A1 599 aaPredicted RBP10.32□□□□□ -0.76
SND1-206ENST00000468166 TOM1L2Q6ZVM7 507 aa10.32□□□□□ -0.76
SND1-206ENST00000468166 MBIPQ9NS73 344 aa10.32□□□□□ -0.76
SND1-206ENST00000468166 NWD2Q9ULI1 1742 aa10.32□□□□□ -0.76
SND1-206ENST00000468166 OVOS2A0A0G2JMS6 1433 aa10.32□□□□□ -0.76
SND1-206ENST00000468166 ADAMTS7Q9UKP4 1686 aa10.31□□□□□ -0.76
SND1-206ENST00000468166 HOXD11P31277 338 aaPredicted RBP10.31□□□□□ -0.76
SND1-206ENST00000468166 EVA1CP58658 441 aa10.31□□□□□ -0.76
SND1-206ENST00000468166 AKAP4Q5JQC9 854 aa10.31□□□□□ -0.76
SND1-206ENST00000468166 C1orf141Q5JVX7 400 aa10.31□□□□□ -0.76
SND1-206ENST00000468166 STRN4Q9NRL3 753 aa10.31□□□□□ -0.76
SND1-206ENST00000468166 SIPA1L3O60292 1781 aaPredicted RBP10.31□□□□□ -0.76
SND1-206ENST00000468166 KDM3BQ7LBC6 1761 aa10.31□□□□□ -0.76
SND1-206ENST00000468166 CANXP27824 592 aaKnown RBP10.3□□□□□ -0.76
SND1-206ENST00000468166 RARSP54136 660 aaKnown RBP10.3□□□□□ -0.76
SND1-206ENST00000468166 BTG4Q9NY30 223 aa10.3□□□□□ -0.76
SND1-206ENST00000468166 SPG7Q9UQ90 795 aa10.3□□□□□ -0.76
SND1-206ENST00000468166 SHANK3Q9BYB0 1731 aa10.3□□□□□ -0.76
SND1-206ENST00000468166 CEMIPQ8WUJ3 1361 aa10.29□□□□□ -0.76
SND1-206ENST00000468166 JCADQ9P266 1359 aa10.29□□□□□ -0.76
SND1-206ENST00000468166 CHL1O00533 1208 aa10.29□□□□□ -0.76
SND1-206ENST00000468166 PLIN1O60240 522 aa10.29□□□□□ -0.76
SND1-206ENST00000468166 BCAR3O75815 825 aa10.29□□□□□ -0.76
SND1-206ENST00000468166 CARD10Q9BWT7 1032 aa10.29□□□□□ -0.76
SND1-206ENST00000468166 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.29□□□□□ -0.763e-12■□□□□ 11.1
SND1-206ENST00000468166 NUTM2BA6NNL0 878 aaPredicted RBP10.28□□□□□ -0.76
SND1-206ENST00000468166 NUTM2EB1AL46 878 aaPredicted RBP10.28□□□□□ -0.76
SND1-206ENST00000468166 ZBTB22O15209 634 aa10.28□□□□□ -0.76
SND1-206ENST00000468166 ADAMTS2O95450 1211 aa10.28□□□□□ -0.76
SND1-206ENST00000468166 LARP1Q6PKG0 1096 aaKnown RBP10.28□□□□□ -0.76
SND1-206ENST00000468166 NUTM2AQ8IVF1 878 aaPredicted RBP10.28□□□□□ -0.76
SND1-206ENST00000468166 IL17REQ8NFR9 667 aa10.28□□□□□ -0.76
SND1-206ENST00000468166 ZNF428Q96B54 188 aa10.28□□□□□ -0.76
SND1-206ENST00000468166 SMC4Q9NTJ3 1288 aa10.28□□□□□ -0.76
SND1-206ENST00000468166 TSPYL4Q9UJ04 414 aa10.28□□□□□ -0.76
SND1-206ENST00000468166 TWISTNBQ3B726 338 aaPredicted RBP10.27□□□□□ -0.77
SND1-206ENST00000468166 BCL2L13Q9BXK5 485 aa10.27□□□□□ -0.77
SND1-206ENST00000468166 BABAM1Q9NWV8 329 aa10.27□□□□□ -0.77
SND1-206ENST00000468166 IL2RBP14784 551 aa10.26□□□□□ -0.77
SND1-206ENST00000468166 TEFQ10587 303 aa10.26□□□□□ -0.77
SND1-206ENST00000468166 TAF7Q15545 349 aaPredicted RBP10.26□□□□□ -0.77
SND1-206ENST00000468166 ALDH1L2Q3SY69 923 aa10.26□□□□□ -0.77
SND1-206ENST00000468166 MPRIPQ6WCQ1 1025 aa10.26□□□□□ -0.77
SND1-206ENST00000468166 FRAT1Q92837 279 aaPredicted RBP10.26□□□□□ -0.77
SND1-206ENST00000468166 FOXD4L1Q9NU39 408 aa10.26□□□□□ -0.77
SND1-206ENST00000468166 PPP4R2Q9NY27 417 aa10.26□□□□□ -0.77
SND1-206ENST00000468166 KIF16BQ96L93 1317 aa10.26□□□□□ -0.77
SND1-206ENST00000468166 PCDH11XQ9BZA7 1347 aa10.26□□□□□ -0.77
SND1-206ENST00000468166 PCDH11YQ9BZA8 1340 aa10.26□□□□□ -0.77
SND1-206ENST00000468166 KDM6AO15550 1401 aaPredicted RBP10.25□□□□□ -0.77
SND1-206ENST00000468166 MRC1P22897 1456 aa10.25□□□□□ -0.77
SND1-206ENST00000468166 RNMTO43148 476 aaKnown RBP10.25□□□□□ -0.77
SND1-206ENST00000468166 VAMP4O75379 141 aa10.25□□□□□ -0.77
SND1-206ENST00000468166 PHKG2P15735 406 aa10.25□□□□□ -0.77
SND1-206ENST00000468166 IFNL2Q8IZJ0 200 aa10.25□□□□□ -0.77
SND1-206ENST00000468166 TSPYL6Q8N831 410 aa10.25□□□□□ -0.77
SND1-206ENST00000468166 C8orf58Q8NAV2 365 aa10.25□□□□□ -0.77
SND1-206ENST00000468166 SSH1Q8WYL5 1049 aa10.25□□□□□ -0.77
SND1-206ENST00000468166 CRBNQ96SW2 442 aa10.25□□□□□ -0.77
SND1-206ENST00000468166 LGR6Q9HBX8 967 aa10.25□□□□□ -0.77
SND1-206ENST00000468166 MIS18AQ9NYP9 233 aa10.25□□□□□ -0.77
SND1-206ENST00000468166 USP35Q9P2H5 1018 aa10.25□□□□□ -0.77
SND1-206ENST00000468166 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.24□□□□□ -0.77
SND1-206ENST00000468166 SLIT2O94813 1529 aa10.24□□□□□ -0.77
SND1-206ENST00000468166 ELL2O00472 640 aaPredicted RBP10.24□□□□□ -0.77
SND1-206ENST00000468166 HSP90AB1P08238 724 aaKnown RBP10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms