RNA–Protein interactions for RNA: ENST00000467673.5

MACF1-211, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-211ENST00000467673 DDX54Q8TDD1 881 aaKnown RBP29.43■■■□□ 2.3
MACF1-211ENST00000467673 EYA1Q99502 592 aa29.43■■■□□ 2.3
MACF1-211ENST00000467673 EIF4A2Q14240 407 aaKnown RBP29.42■■■□□ 2.3
MACF1-211ENST00000467673 RAPGEF4Q8WZA2 1011 aa29.42■■■□□ 2.3
MACF1-211ENST00000467673 ACSBG1Q96GR2 724 aa29.41■■■□□ 2.3
MACF1-211ENST00000467673 RGPD3A6NKT7 1758 aaPredicted RBP29.41■■■□□ 2.3
MACF1-211ENST00000467673 RGPD4Q7Z3J3 1758 aa29.41■■■□□ 2.3
MACF1-211ENST00000467673 NHSQ6T4R5 1651 aa29.4■■■□□ 2.3
MACF1-211ENST00000467673 PROM2Q8N271 834 aa29.4■■■□□ 2.3
MACF1-211ENST00000467673 TATP17735 454 aaPredicted RBP29.39■■■□□ 2.3
MACF1-211ENST00000467673 NUP188Q5SRE5 1749 aa29.38■■■□□ 2.29
MACF1-211ENST00000467673 NPC1L1Q9UHC9 1359 aa29.38■■■□□ 2.29
MACF1-211ENST00000467673 KAT6BQ8WYB5 2073 aa29.36■■■□□ 2.29
MACF1-211ENST00000467673 PSDA5PKW4 1024 aaPredicted RBP29.35■■■□□ 2.29
MACF1-211ENST00000467673 CC2D1BQ5T0F9 858 aaKnown RBP29.33■■■□□ 2.29
MACF1-211ENST00000467673 IGSF1Q8N6C5 1336 aa29.32■■■□□ 2.28
MACF1-211ENST00000467673 CYP27B1O15528 508 aa29.32■■■□□ 2.28
MACF1-211ENST00000467673 R3HDM1Q15032 1099 aaKnown RBP29.32■■■□□ 2.28
MACF1-211ENST00000467673 BTAF1O14981 1849 aa29.31■■■□□ 2.28
MACF1-211ENST00000467673 PKD1L3Q7Z443 1732 aa29.31■■■□□ 2.28
MACF1-211ENST00000467673 PCDH11XQ9BZA7 1347 aa29.29■■■□□ 2.28
MACF1-211ENST00000467673 PCDH11YQ9BZA8 1340 aa29.29■■■□□ 2.28
MACF1-211ENST00000467673 PRIM1P49642 420 aaKnown RBP29.29■■■□□ 2.28
MACF1-211ENST00000467673 TXNRD1Q16881 649 aa29.29■■■□□ 2.28
MACF1-211ENST00000467673 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.29■■■□□ 2.282e-6■□□□□ 10.8
MACF1-211ENST00000467673 MTHFSP49914 203 aa29.28■■■□□ 2.28
MACF1-211ENST00000467673 IL13P35225 146 aa29.27■■■□□ 2.28
MACF1-211ENST00000467673 DOT1LQ8TEK3 1739 aa29.26■■■□□ 2.27
MACF1-211ENST00000467673 NBPF14Q5TI25 921 aa29.26■■■□□ 2.27
MACF1-211ENST00000467673 NKX1-1Q15270 411 aaPredicted RBP29.24■■■□□ 2.27
MACF1-211ENST00000467673 ANO8Q9HCE9 1232 aaPredicted RBP29.24■■■□□ 2.27
MACF1-211ENST00000467673 PLEKHG2Q9H7P9 1386 aa29.24■■■□□ 2.27
MACF1-211ENST00000467673 SPG7Q9UQ90 795 aa29.23■■■□□ 2.27
MACF1-211ENST00000467673 SYTL4Q96C24 671 aaPredicted RBP29.21■■■□□ 2.27
MACF1-211ENST00000467673 AEBP1Q8IUX7 1158 aa29.2■■■□□ 2.26
MACF1-211ENST00000467673 KDRP35968 1356 aa29.19■■■□□ 2.26
MACF1-211ENST00000467673 LRRC4BQ9NT99 713 aa29.19■■■□□ 2.26
MACF1-211ENST00000467673 CNGB1Q14028 1251 aaPredicted RBP29.18■■■□□ 2.26
MACF1-211ENST00000467673 TOGARAM1Q9Y4F4 1720 aa29.17■■■□□ 2.26
MACF1-211ENST00000467673 PHKG2P15735 406 aa29.17■■■□□ 2.26
MACF1-211ENST00000467673 SULT6B1Q6IMI4 303 aa29.16■■■□□ 2.26
MACF1-211ENST00000467673 IFNL2Q8IZJ0 200 aa29.15■■■□□ 2.26
MACF1-211ENST00000467673 LRP5O75197 1615 aa29.15■■■□□ 2.26
MACF1-211ENST00000467673 PAPPAQ13219 1627 aa29.14■■■□□ 2.26
MACF1-211ENST00000467673 COL3A1P02461 1466 aaPredicted RBP29.14■■■□□ 2.26
MACF1-211ENST00000467673 LY75O60449 1722 aa29.13■■■□□ 2.25
MACF1-211ENST00000467673 ITGB4P16144 1822 aa29.13■■■□□ 2.25
MACF1-211ENST00000467673 SLC15A2Q16348 729 aa29.12■■■□□ 2.25
MACF1-211ENST00000467673 SLC27A3Q5K4L6 730 aa29.12■■■□□ 2.25
MACF1-211ENST00000467673 DIAPH1O60610 1272 aaKnown RBP29.11■■■□□ 2.25
MACF1-211ENST00000467673 PLEKHO1Q53GL0 409 aaPredicted RBP29.11■■■□□ 2.25
MACF1-211ENST00000467673 AMOTQ4VCS5 1084 aa29.1■■■□□ 2.25
MACF1-211ENST00000467673 MPRIPQ6WCQ1 1025 aa29.1■■■□□ 2.25
MACF1-211ENST00000467673 PIGBQ92521 554 aa29.1■■■□□ 2.25
MACF1-211ENST00000467673 PDGFDQ9GZP0 370 aaPredicted RBP29.09■■■□□ 2.25
MACF1-211ENST00000467673 STK32BQ9NY57 414 aa29.09■■■□□ 2.25
MACF1-211ENST00000467673 KCNQ4P56696 695 aa29.08■■■□□ 2.25
MACF1-211ENST00000467673 CASZ1Q86V15 1759 aa29.07■■■□□ 2.24
MACF1-211ENST00000467673 PPP2R1AP30153 589 aa29.06■■■□□ 2.24
MACF1-211ENST00000467673 ZNF827Q17R98 1081 aa29.06■■■□□ 2.24
MACF1-211ENST00000467673 AKT1S1Q96B36 256 aa29.06■■■□□ 2.24
MACF1-211ENST00000467673 ZNF530Q6P9A1 599 aaPredicted RBP29.05■■■□□ 2.24
MACF1-211ENST00000467673 HMOX1P09601 288 aa29.04■■■□□ 2.24
MACF1-211ENST00000467673 DCAF5Q96JK2 942 aa29.03■■■□□ 2.24
MACF1-211ENST00000467673 CCNL1Q9UK58 526 aaPredicted RBP29.02■■■□□ 2.24
MACF1-211ENST00000467673 KDM6AO15550 1401 aaPredicted RBP29.02■■■□□ 2.24
MACF1-211ENST00000467673 PALLDQ8WX93 1383 aa29.01■■■□□ 2.24
MACF1-211ENST00000467673 ERVV-2B6SEH9 535 aa29.01■■■□□ 2.23
MACF1-211ENST00000467673 HSP90AB1P08238 724 aaKnown RBP29.01■■■□□ 2.23
MACF1-211ENST00000467673 SMARCC1Q92922 1105 aaPredicted RBP29■■■□□ 2.23
MACF1-211ENST00000467673 TMOD3Q9NYL9 352 aa29■■■□□ 2.23
MACF1-211ENST00000467673 ASAP1Q9ULH1 1129 aa28.98■■■□□ 2.23
MACF1-211ENST00000467673 SPON1Q9HCB6 807 aa28.97■■■□□ 2.23
MACF1-211ENST00000467673 ZEB1P37275 1124 aaPredicted RBP28.96■■■□□ 2.23
MACF1-211ENST00000467673 C1orf141Q5JVX7 400 aa28.96■■■□□ 2.23
MACF1-211ENST00000467673 ATG3Q9NT62 314 aa28.96■■■□□ 2.23
MACF1-211ENST00000467673 U2SURPO15042 1029 aaKnown RBP28.95■■■□□ 2.22
MACF1-211ENST00000467673 DDX10Q13206 875 aaKnown RBP28.95■■■□□ 2.22
MACF1-211ENST00000467673 CFAP53Q96M91 514 aa28.95■■■□□ 2.22
MACF1-211ENST00000467673 MTHFSDQ2M296 383 aaKnown RBP28.94■■■□□ 2.22
MACF1-211ENST00000467673 AKAP4Q5JQC9 854 aa28.94■■■□□ 2.22
MACF1-211ENST00000467673 QSER1Q2KHR3 1735 aa28.94■■■□□ 2.22
MACF1-211ENST00000467673 TAF1LQ8IZX4 1826 aa28.93■■■□□ 2.22
MACF1-211ENST00000467673 ZBTB7AO95365 584 aa28.93■■■□□ 2.22
MACF1-211ENST00000467673 PNPLA7Q6ZV29 1317 aa28.93■■■□□ 2.22
MACF1-211ENST00000467673 TUBGCP6Q96RT7 1819 aa28.92■■■□□ 2.22
MACF1-211ENST00000467673 C5P01031 1676 aa28.91■■■□□ 2.22
MACF1-211ENST00000467673 LOC102724428A0A0B4J2F2 783 aa28.91■■■□□ 2.22
MACF1-211ENST00000467673 PTGER2P43116 358 aa28.91■■■□□ 2.22
MACF1-211ENST00000467673 SIK1P57059 783 aa28.91■■■□□ 2.22
MACF1-211ENST00000467673 SCN11AQ9UI33 1791 aa28.9■■■□□ 2.22
MACF1-211ENST00000467673 CABP4P57796 275 aa28.9■■■□□ 2.22
MACF1-211ENST00000467673 TFCP2L1Q9NZI6 479 aa28.9■■■□□ 2.22
MACF1-211ENST00000467673 NFATC2IPQ8NCF5 419 aa28.89■■■□□ 2.22
MACF1-211ENST00000467673 MTFR1LQ9H019 292 aa28.89■■■□□ 2.22
MACF1-211ENST00000467673 LGR6Q9HBX8 967 aa28.89■■■□□ 2.22
MACF1-211ENST00000467673 SGIP1Q9BQI5 828 aa28.88■■■□□ 2.21
MACF1-211ENST00000467673 RSPH6AQ9H0K4 717 aa28.88■■■□□ 2.21
MACF1-211ENST00000467673 ATF5Q9Y2D1 282 aaPredicted RBP28.88■■■□□ 2.21
MACF1-211ENST00000467673 SLC4A9Q96Q91 983 aa28.87■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms