RNA–Protein interactions for RNA: ENST00000467529.5

TMEM254-209, Transcript of transmembrane protein 254, humanhuman

TSL 1 (best)

Gene TMEM254, Length 1,963 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-209ENST00000467529 CHL1O00533 1208 aa11.52□□□□□ -0.56
TMEM254-209ENST00000467529 MS4A1P11836 297 aa11.52□□□□□ -0.56
TMEM254-209ENST00000467529 TRIM27P14373 513 aa11.52□□□□□ -0.56
TMEM254-209ENST00000467529 MED1Q15648 1581 aaPredicted RBP11.52□□□□□ -0.56
TMEM254-209ENST00000467529 NBPF6Q5VWK0 638 aa11.52□□□□□ -0.56
TMEM254-209ENST00000467529 NPHP3Q7Z494 1330 aa11.52□□□□□ -0.56
TMEM254-209ENST00000467529 DZIP1LQ8IYY4 767 aaKnown RBP11.52□□□□□ -0.56
TMEM254-209ENST00000467529 NBPF4Q96M43 638 aa11.52□□□□□ -0.56
TMEM254-209ENST00000467529 KIF16BQ96L93 1317 aa11.52□□□□□ -0.57
TMEM254-209ENST00000467529 BRPF1P55201 1214 aaPredicted RBP11.52□□□□□ -0.57
TMEM254-209ENST00000467529 TWISTNBQ3B726 338 aaPredicted RBP11.52□□□□□ -0.57
TMEM254-209ENST00000467529 ATF7IPQ6VMQ6 1270 aa11.52□□□□□ -0.57
TMEM254-209ENST00000467529 RTF1Q92541 710 aaKnown RBP11.52□□□□□ -0.57
TMEM254-209ENST00000467529 HTATSF1O43719 755 aaKnown RBP11.51□□□□□ -0.57
TMEM254-209ENST00000467529 AAMPQ13685 434 aa11.51□□□□□ -0.57
TMEM254-209ENST00000467529 MVPQ14764 893 aaKnown RBP11.51□□□□□ -0.57
TMEM254-209ENST00000467529 FTSJ3Q8IY81 847 aaKnown RBP11.51□□□□□ -0.57
TMEM254-209ENST00000467529 MRPL50Q8N5N7 158 aaKnown RBP11.51□□□□□ -0.57
TMEM254-209ENST00000467529 IPO8O15397 1037 aaKnown RBP11.5□□□□□ -0.57
TMEM254-209ENST00000467529 LRRC59Q96AG4 307 aaKnown RBP11.5□□□□□ -0.57
TMEM254-209ENST00000467529 PXDNQ92626 1479 aa11.5□□□□□ -0.57
TMEM254-209ENST00000467529 TNS3Q68CZ2 1445 aa11.49□□□□□ -0.57
TMEM254-209ENST00000467529 LRRC37A3O60309 1634 aa11.49□□□□□ -0.57
TMEM254-209ENST00000467529 GNAT3A8MTJ3 354 aa11.49□□□□□ -0.57
TMEM254-209ENST00000467529 TCERG1O14776 1098 aaKnown RBP11.49□□□□□ -0.57
TMEM254-209ENST00000467529 IGHDP01880 384 aa11.49□□□□□ -0.57
TMEM254-209ENST00000467529 ZC3H6P61129 1189 aaKnown RBP11.49□□□□□ -0.57
TMEM254-209ENST00000467529 BRINP3Q76B58 766 aa11.49□□□□□ -0.57
TMEM254-209ENST00000467529 ANKRD24Q8TF21 1146 aa11.49□□□□□ -0.57
TMEM254-209ENST00000467529 AXIN2Q9Y2T1 843 aa11.49□□□□□ -0.57
TMEM254-209ENST00000467529 RGPD5Q99666 1765 aa11.49□□□□□ -0.57
TMEM254-209ENST00000467529 MAP3K5Q99683 1374 aa11.49□□□□□ -0.57
TMEM254-209ENST00000467529 KRT24Q2M2I5 525 aa11.48□□□□□ -0.57
TMEM254-209ENST00000467529 SKAP1Q86WV1 359 aa11.48□□□□□ -0.57
TMEM254-209ENST00000467529 MIS18AQ9NYP9 233 aa11.48□□□□□ -0.57
TMEM254-209ENST00000467529 KIAA0232Q92628 1395 aa11.48□□□□□ -0.57
TMEM254-209ENST00000467529 SPATA31A3Q5VYP0 1347 aa11.48□□□□□ -0.57
TMEM254-209ENST00000467529 TMEM57Q8N5G2 664 aa11.48□□□□□ -0.57
TMEM254-209ENST00000467529 PCDHB15Q9Y5E8 787 aa11.48□□□□□ -0.57
TMEM254-209ENST00000467529 NCAPD2Q15021 1401 aa11.48□□□□□ -0.57
TMEM254-209ENST00000467529 ITPRIPQ8IWB1 547 aa11.47□□□□□ -0.57
TMEM254-209ENST00000467529 IL17REQ8NFR9 667 aa11.47□□□□□ -0.57
TMEM254-209ENST00000467529 ARHGAP45Q92619 1136 aa11.47□□□□□ -0.57
TMEM254-209ENST00000467529 SLAIN2Q9P270 581 aa11.47□□□□□ -0.57
TMEM254-209ENST00000467529 TSPYL4Q9UJ04 414 aa11.47□□□□□ -0.57
TMEM254-209ENST00000467529 CAMTA1Q9Y6Y1 1673 aa11.47□□□□□ -0.57
TMEM254-209ENST00000467529 CRYBG1Q9Y4K1 1723 aa11.47□□□□□ -0.57
TMEM254-209ENST00000467529 CABLES1Q8TDN4 633 aa11.47□□□□□ -0.57
TMEM254-209ENST00000467529 ARXQ96QS3 562 aa11.46□□□□□ -0.58
TMEM254-209ENST00000467529 DDX19BQ9UMR2 479 aa11.46□□□□□ -0.58
TMEM254-209ENST00000467529 COL18A1P39060 1754 aa11.46□□□□□ -0.58
TMEM254-209ENST00000467529 HAP1P54257 671 aaPredicted RBP11.45□□□□□ -0.58
TMEM254-209ENST00000467529 ERBB3P21860 1342 aa11.44□□□□□ -0.58
TMEM254-209ENST00000467529 LMO7Q8WWI1 1683 aa11.44□□□□□ -0.58
TMEM254-209ENST00000467529 TAF7Q15545 349 aaPredicted RBP11.44□□□□□ -0.58
TMEM254-209ENST00000467529 PLEKHO1Q53GL0 409 aaPredicted RBP11.44□□□□□ -0.58
TMEM254-209ENST00000467529 SOS2Q07890 1332 aaPredicted RBP11.44□□□□□ -0.58
TMEM254-209ENST00000467529 CEMIPQ8WUJ3 1361 aa11.43□□□□□ -0.58
TMEM254-209ENST00000467529 AMOTQ4VCS5 1084 aa11.43□□□□□ -0.58
TMEM254-209ENST00000467529 AKAP4Q5JQC9 854 aa11.43□□□□□ -0.58
TMEM254-209ENST00000467529 ZNF530Q6P9A1 599 aaPredicted RBP11.43□□□□□ -0.58
TMEM254-209ENST00000467529 API5Q9BZZ5 524 aaKnown RBP11.43□□□□□ -0.58
TMEM254-209ENST00000467529 RWDD1Q9H446 243 aaPredicted RBP11.43□□□□□ -0.58
TMEM254-209ENST00000467529 ZBTB40Q9NUA8 1239 aa11.43□□□□□ -0.58
TMEM254-209ENST00000467529 BABAM1Q9NWV8 329 aa11.43□□□□□ -0.58
TMEM254-209ENST00000467529 ABCC4O15439 1325 aa11.42□□□□□ -0.58
TMEM254-209ENST00000467529 ABCC6O95255 1503 aa11.42□□□□□ -0.58
TMEM254-209ENST00000467529 CHRNA2Q15822 529 aa11.42□□□□□ -0.58
TMEM254-209ENST00000467529 LGR6Q9HBX8 967 aa11.42□□□□□ -0.58
TMEM254-209ENST00000467529 CPDO75976 1380 aa11.41□□□□□ -0.58
TMEM254-209ENST00000467529 PDE4AP27815 886 aa11.41□□□□□ -0.58
TMEM254-209ENST00000467529 ANP32EQ9BTT0 268 aa11.41□□□□□ -0.58
TMEM254-209ENST00000467529 NLRP2Q9NX02 1062 aa11.41□□□□□ -0.58
TMEM254-209ENST00000467529 FAM208AQ9UK61 1670 aaKnown RBP11.41□□□□□ -0.58
TMEM254-209ENST00000467529 VIRMAQ69YN4 1812 aaKnown RBP11.4□□□□□ -0.58
TMEM254-209ENST00000467529 ZBTB7BO15156 539 aaPredicted RBP11.4□□□□□ -0.58
TMEM254-209ENST00000467529 RGS3P49796 1198 aa11.4□□□□□ -0.58
TMEM254-209ENST00000467529 MPRIPQ6WCQ1 1025 aa11.4□□□□□ -0.58
TMEM254-209ENST00000467529 NHSL1Q5SYE7 1610 aa11.4□□□□□ -0.59
TMEM254-209ENST00000467529 SLC4A2P04920 1241 aa11.39□□□□□ -0.59
TMEM254-209ENST00000467529 C1orf141Q5JVX7 400 aa11.39□□□□□ -0.59
TMEM254-209ENST00000467529 BACH2Q9BYV9 841 aa11.39□□□□□ -0.59
TMEM254-209ENST00000467529 RGS12O14924 1447 aa11.39□□□□□ -0.59
TMEM254-209ENST00000467529 RNMTO43148 476 aaKnown RBP11.39□□□□□ -0.59
TMEM254-209ENST00000467529 CSB-PGBD3P0DP91 1061 aa11.39□□□□□ -0.59
TMEM254-209ENST00000467529 HDAC1Q13547 482 aaPredicted RBP11.39□□□□□ -0.59
TMEM254-209ENST00000467529 PTPRCP08575 1304 aa11.39□□□□□ -0.59
TMEM254-209ENST00000467529 KDM3BQ7LBC6 1761 aa11.38□□□□□ -0.59
TMEM254-209ENST00000467529 RAPGEF4Q8WZA2 1011 aa11.38□□□□□ -0.59
TMEM254-209ENST00000467529 CHMP4BQ9H444 224 aaKnown RBP11.38□□□□□ -0.59
TMEM254-209ENST00000467529 SOS1Q07889 1333 aaPredicted RBP11.38□□□□□ -0.59
TMEM254-209ENST00000467529 ABCA3Q99758 1704 aa11.38□□□□□ -0.59
TMEM254-209ENST00000467529 TEFQ10587 303 aa11.37□□□□□ -0.59
TMEM254-209ENST00000467529 INTS3Q68E01 1043 aaKnown RBP11.37□□□□□ -0.59
TMEM254-209ENST00000467529 G2E3Q7L622 706 aa11.37□□□□□ -0.59
TMEM254-209ENST00000467529 PDZRN3Q9UPQ7 1066 aa11.37□□□□□ -0.59
TMEM254-209ENST00000467529 OVOS2A0A0G2JMS6 1433 aa11.37□□□□□ -0.59
TMEM254-209ENST00000467529 TATP17735 454 aaPredicted RBP11.37□□□□□ -0.59
TMEM254-209ENST00000467529 CCDC30Q5VVM6 783 aa11.37□□□□□ -0.59
TMEM254-209ENST00000467529 MEGF6O75095 1541 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms