RNA–Protein interactions for RNA: ENST00000467319.1

MSH5-212, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-212ENST00000467319 RGPD3A6NKT7 1758 aaPredicted RBP14.93□□□□□ -0.02
MSH5-212ENST00000467319 RGPD4Q7Z3J3 1758 aa14.93□□□□□ -0.02
MSH5-212ENST00000467319 TOGARAM1Q9Y4F4 1720 aa14.93□□□□□ -0.02
MSH5-212ENST00000467319 RALBP1Q15311 655 aa14.93□□□□□ -0.02
MSH5-212ENST00000467319 FAM196AQ6ZSG2 479 aa14.93□□□□□ -0.02
MSH5-212ENST00000467319 RAPGEF4Q8WZA2 1011 aa14.93□□□□□ -0.02
MSH5-212ENST00000467319 EXOC5O00471 708 aa14.92□□□□□ -0.02
MSH5-212ENST00000467319 AEBP1Q8IUX7 1158 aa14.92□□□□□ -0.02
MSH5-212ENST00000467319 DIAPH1O60610 1272 aaKnown RBP14.91□□□□□ -0.02
MSH5-212ENST00000467319 TATP17735 454 aaPredicted RBP14.91□□□□□ -0.02
MSH5-212ENST00000467319 ZCRB1Q8TBF4 217 aaKnown RBP14.9□□□□□ -0.02
MSH5-212ENST00000467319 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.9□□□□□ -0.022e-6■□□□□ 9.5
MSH5-212ENST00000467319 MYBBP1AQ9BQG0 1328 aaKnown RBP14.9□□□□□ -0.02
MSH5-212ENST00000467319 PCDH11XQ9BZA7 1347 aa14.9□□□□□ -0.02
MSH5-212ENST00000467319 PCDH11YQ9BZA8 1340 aa14.9□□□□□ -0.02
MSH5-212ENST00000467319 CCDC125Q86Z20 511 aa14.89□□□□□ -0.03
MSH5-212ENST00000467319 CFAP53Q96M91 514 aa14.89□□□□□ -0.03
MSH5-212ENST00000467319 PRKRIP1Q9H875 184 aaPredicted RBP14.89□□□□□ -0.03
MSH5-212ENST00000467319 RREB1Q92766 1687 aa14.89□□□□□ -0.03
MSH5-212ENST00000467319 BTAF1O14981 1849 aa14.87□□□□□ -0.03
MSH5-212ENST00000467319 ADAMTS7Q9UKP4 1686 aa14.87□□□□□ -0.03
MSH5-212ENST00000467319 CYP27B1O15528 508 aa14.87□□□□□ -0.03
MSH5-212ENST00000467319 SULT6B1Q6IMI4 303 aa14.87□□□□□ -0.03
MSH5-212ENST00000467319 TRIM37O94972 964 aa14.85□□□□□ -0.03
MSH5-212ENST00000467319 SPG7Q9UQ90 795 aa14.85□□□□□ -0.03
MSH5-212ENST00000467319 KDM6AO15550 1401 aaPredicted RBP14.84□□□□□ -0.03
MSH5-212ENST00000467319 NUP188Q5SRE5 1749 aa14.84□□□□□ -0.03
MSH5-212ENST00000467319 NKX1-1Q15270 411 aaPredicted RBP14.84□□□□□ -0.03
MSH5-212ENST00000467319 DDX54Q8TDD1 881 aaKnown RBP14.84□□□□□ -0.03
MSH5-212ENST00000467319 BCL11BQ9C0K0 894 aaPredicted RBP14.84□□□□□ -0.03
MSH5-212ENST00000467319 MRC1P22897 1456 aa14.83□□□□□ -0.03
MSH5-212ENST00000467319 ITGB4P16144 1822 aa14.83□□□□□ -0.04
MSH5-212ENST00000467319 HMOX1P09601 288 aa14.83□□□□□ -0.04
MSH5-212ENST00000467319 PHKG2P15735 406 aa14.83□□□□□ -0.04
MSH5-212ENST00000467319 PTF1AQ7RTS3 328 aa14.83□□□□□ -0.04
MSH5-212ENST00000467319 RSPH6AQ9H0K4 717 aa14.83□□□□□ -0.04
MSH5-212ENST00000467319 U2SURPO15042 1029 aaKnown RBP14.82□□□□□ -0.04
MSH5-212ENST00000467319 AMOTQ4VCS5 1084 aa14.82□□□□□ -0.04
MSH5-212ENST00000467319 SCN11AQ9UI33 1791 aa14.82□□□□□ -0.04
MSH5-212ENST00000467319 KCNQ2O43526 872 aa14.81□□□□□ -0.04
MSH5-212ENST00000467319 PLEKHO1Q53GL0 409 aaPredicted RBP14.81□□□□□ -0.04
MSH5-212ENST00000467319 DEFB132Q7Z7B7 95 aa14.81□□□□□ -0.04
MSH5-212ENST00000467319 NUDCQ9Y266 331 aa14.81□□□□□ -0.04
MSH5-212ENST00000467319 PAPPAQ13219 1627 aa14.81□□□□□ -0.04
MSH5-212ENST00000467319 LY75O60449 1722 aa14.8□□□□□ -0.04
MSH5-212ENST00000467319 BAG6P46379 1132 aa14.8□□□□□ -0.04
MSH5-212ENST00000467319 SF3B2Q13435 895 aaKnown RBP14.8□□□□□ -0.04
MSH5-212ENST00000467319 ZNF530Q6P9A1 599 aaPredicted RBP14.8□□□□□ -0.04
MSH5-212ENST00000467319 IFNL2Q8IZJ0 200 aa14.8□□□□□ -0.04
MSH5-212ENST00000467319 VIRMAQ69YN4 1812 aaKnown RBP14.79□□□□□ -0.04
MSH5-212ENST00000467319 ACSBG1Q96GR2 724 aa14.79□□□□□ -0.04
MSH5-212ENST00000467319 FCHSD2O94868 740 aa14.78□□□□□ -0.04
MSH5-212ENST00000467319 APBA3O96018 575 aa14.78□□□□□ -0.04
MSH5-212ENST00000467319 U2AF1L5P0DN76 240 aaPredicted RBP14.78□□□□□ -0.04
MSH5-212ENST00000467319 PRKAR2BP31323 418 aa14.78□□□□□ -0.04
MSH5-212ENST00000467319 U2AF1Q01081 240 aaKnown RBP eCLIP14.78□□□□□ -0.04
MSH5-212ENST00000467319 CAMKK2Q96RR4 588 aa14.78□□□□□ -0.04
MSH5-212ENST00000467319 PLSCR1O15162 318 aa14.77□□□□□ -0.05
MSH5-212ENST00000467319 PRIM1P49642 420 aaKnown RBP14.77□□□□□ -0.05
MSH5-212ENST00000467319 MTHFSDQ2M296 383 aaKnown RBP14.77□□□□□ -0.05
MSH5-212ENST00000467319 MAP3K5Q99683 1374 aa14.76□□□□□ -0.05
MSH5-212ENST00000467319 SIPA1L3O60292 1781 aaPredicted RBP14.76□□□□□ -0.05
MSH5-212ENST00000467319 HSP90AB1P08238 724 aaKnown RBP14.76□□□□□ -0.05
MSH5-212ENST00000467319 EN1Q05925 392 aaPredicted RBP14.76□□□□□ -0.05
MSH5-212ENST00000467319 DCAF5Q96JK2 942 aa14.76□□□□□ -0.05
MSH5-212ENST00000467319 CICQ96RK0 1608 aaPredicted RBP14.75□□□□□ -0.05
MSH5-212ENST00000467319 AKAP4Q5JQC9 854 aa14.75□□□□□ -0.05
MSH5-212ENST00000467319 C1orf141Q5JVX7 400 aa14.75□□□□□ -0.05
MSH5-212ENST00000467319 PHACTR3Q96KR7 559 aa14.75□□□□□ -0.05
MSH5-212ENST00000467319 ZNF831Q5JPB2 1677 aa14.74□□□□□ -0.05
MSH5-212ENST00000467319 ANP32CO43423 234 aa14.74□□□□□ -0.05
MSH5-212ENST00000467319 EZH2Q15910 746 aaKnown RBP14.74□□□□□ -0.05
MSH5-212ENST00000467319 GAS2L2Q8NHY3 880 aa14.74□□□□□ -0.05
MSH5-212ENST00000467319 PLEKHF1Q96S99 279 aa14.74□□□□□ -0.05
MSH5-212ENST00000467319 CEMIPQ8WUJ3 1361 aa14.73□□□□□ -0.05
MSH5-212ENST00000467319 ERVV-2B6SEH9 535 aa14.73□□□□□ -0.05
MSH5-212ENST00000467319 DLG5Q8TDM6 1919 aa14.72□□□□□ -0.05
MSH5-212ENST00000467319 CCDC184Q52MB2 194 aa14.72□□□□□ -0.05
MSH5-212ENST00000467319 PROM2Q8N271 834 aa14.72□□□□□ -0.05
MSH5-212ENST00000467319 PIGBQ92521 554 aa14.72□□□□□ -0.05
MSH5-212ENST00000467319 SYTL4Q96C24 671 aaPredicted RBP14.72□□□□□ -0.05
MSH5-212ENST00000467319 UBR2Q8IWV8 1755 aa14.72□□□□□ -0.05
MSH5-212ENST00000467319 PALLDQ8WX93 1383 aa14.72□□□□□ -0.05
MSH5-212ENST00000467319 C5P01031 1676 aa14.71□□□□□ -0.05
MSH5-212ENST00000467319 KAT6BQ8WYB5 2073 aa14.71□□□□□ -0.05
MSH5-212ENST00000467319 MPRIPQ6WCQ1 1025 aa14.71□□□□□ -0.05
MSH5-212ENST00000467319 TMOD3Q9NYL9 352 aa14.71□□□□□ -0.05
MSH5-212ENST00000467319 TXNRD1Q16881 649 aa14.7□□□□□ -0.06
MSH5-212ENST00000467319 TAF1LQ8IZX4 1826 aa14.7□□□□□ -0.06
MSH5-212ENST00000467319 GNAT3A8MTJ3 354 aa14.69□□□□□ -0.06
MSH5-212ENST00000467319 RNMTO43148 476 aaKnown RBP14.69□□□□□ -0.06
MSH5-212ENST00000467319 WDR43Q15061 677 aaKnown RBP eCLIP14.69□□□□□ -0.06
MSH5-212ENST00000467319 KCPQ6ZWJ8 1503 aa14.69□□□□□ -0.06
MSH5-212ENST00000467319 QSER1Q2KHR3 1735 aa14.69□□□□□ -0.06
MSH5-212ENST00000467319 SLC27A3Q5K4L6 730 aa14.68□□□□□ -0.06
MSH5-212ENST00000467319 SLC52A2Q9HAB3 445 aa14.68□□□□□ -0.06
MSH5-212ENST00000467319 LGR6Q9HBX8 967 aa14.68□□□□□ -0.06
MSH5-212ENST00000467319 COL5A3P25940 1745 aaPredicted RBP14.68□□□□□ -0.06
MSH5-212ENST00000467319 TJP1Q07157 1748 aa14.68□□□□□ -0.06
MSH5-212ENST00000467319 TUBGCP6Q96RT7 1819 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms