RNA–Protein interactions for RNA: ENST00000467288.6

GMDS-203, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 5

Gene GMDS, Length 900 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-203ENST00000467288 USHBP1Q8N6Y0 703 aa26.69■■□□□ 1.86
GMDS-203ENST00000467288 PPM1GO15355 546 aaPredicted RBP26.68■■□□□ 1.86
GMDS-203ENST00000467288 DDX54Q8TDD1 881 aaKnown RBP26.68■■□□□ 1.86
GMDS-203ENST00000467288 ZCRB1Q8TBF4 217 aaKnown RBP26.67■■□□□ 1.86
GMDS-203ENST00000467288 ACSBG1Q96GR2 724 aa26.67■■□□□ 1.86
GMDS-203ENST00000467288 ANO8Q9HCE9 1232 aaPredicted RBP26.67■■□□□ 1.86
GMDS-203ENST00000467288 RAPGEF4Q8WZA2 1011 aa26.66■■□□□ 1.86
GMDS-203ENST00000467288 PPP1R1BQ9UD71 204 aaPredicted RBP26.66■■□□□ 1.86
GMDS-203ENST00000467288 KNSTRNQ9Y448 316 aa26.66■■□□□ 1.86
GMDS-203ENST00000467288 SHANK3Q9BYB0 1731 aa26.65■■□□□ 1.86
GMDS-203ENST00000467288 TNNT2P45379 298 aaPredicted RBP26.65■■□□□ 1.86
GMDS-203ENST00000467288 NCAPD2Q15021 1401 aa26.65■■□□□ 1.86
GMDS-203ENST00000467288 TATP17735 454 aaPredicted RBP26.63■■□□□ 1.85
GMDS-203ENST00000467288 PDGFDQ9GZP0 370 aaPredicted RBP26.62■■□□□ 1.85
GMDS-203ENST00000467288 TXNRD1Q16881 649 aa26.61■■□□□ 1.85
GMDS-203ENST00000467288 AMER1Q5JTC6 1135 aaPredicted RBP26.61■■□□□ 1.85
GMDS-203ENST00000467288 MORC1Q86VD1 984 aa26.61■■□□□ 1.85
GMDS-203ENST00000467288 PER1O15534 1290 aaPredicted RBP26.59■■□□□ 1.85
GMDS-203ENST00000467288 EYA1Q99502 592 aa26.59■■□□□ 1.85
GMDS-203ENST00000467288 BTAF1O14981 1849 aa26.58■■□□□ 1.85
GMDS-203ENST00000467288 EIF4A2Q14240 407 aaKnown RBP26.57■■□□□ 1.84
GMDS-203ENST00000467288 ZBTB7AO95365 584 aa26.55■■□□□ 1.84
GMDS-203ENST00000467288 STK32BQ9NY57 414 aa26.55■■□□□ 1.84
GMDS-203ENST00000467288 PCDH11XQ9BZA7 1347 aa26.55■■□□□ 1.84
GMDS-203ENST00000467288 PCDH11YQ9BZA8 1340 aa26.55■■□□□ 1.84
GMDS-203ENST00000467288 DOT1LQ8TEK3 1739 aa26.54■■□□□ 1.84
GMDS-203ENST00000467288 PRIM1P49642 420 aaKnown RBP26.54■■□□□ 1.84
GMDS-203ENST00000467288 KAT6BQ8WYB5 2073 aa26.53■■□□□ 1.84
GMDS-203ENST00000467288 SLC15A2Q16348 729 aa26.53■■□□□ 1.84
GMDS-203ENST00000467288 PKD1L3Q7Z443 1732 aa26.53■■□□□ 1.84
GMDS-203ENST00000467288 YY1P25490 414 aa26.52■■□□□ 1.84
GMDS-203ENST00000467288 ATF5Q9Y2D1 282 aaPredicted RBP26.52■■□□□ 1.84
GMDS-203ENST00000467288 DCAF8L1A6NGE4 600 aa26.51■■□□□ 1.83
GMDS-203ENST00000467288 CYP27B1O15528 508 aa26.51■■□□□ 1.83
GMDS-203ENST00000467288 IGSF1Q8N6C5 1336 aa26.5■■□□□ 1.83
GMDS-203ENST00000467288 PTGER2P43116 358 aa26.5■■□□□ 1.83
GMDS-203ENST00000467288 SYTL4Q96C24 671 aaPredicted RBP26.5■■□□□ 1.83
GMDS-203ENST00000467288 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.5■■□□□ 1.83
GMDS-203ENST00000467288 SPG7Q9UQ90 795 aa26.48■■□□□ 1.83
GMDS-203ENST00000467288 PLEKHG2Q9H7P9 1386 aa26.47■■□□□ 1.83
GMDS-203ENST00000467288 NPC1L1Q9UHC9 1359 aa26.47■■□□□ 1.83
GMDS-203ENST00000467288 LRRC4BQ9NT99 713 aa26.46■■□□□ 1.83
GMDS-203ENST00000467288 PAPPAQ13219 1627 aa26.46■■□□□ 1.83
GMDS-203ENST00000467288 NKX1-1Q15270 411 aaPredicted RBP26.45■■□□□ 1.82
GMDS-203ENST00000467288 SLC27A3Q5K4L6 730 aa26.44■■□□□ 1.82
GMDS-203ENST00000467288 CC2D1BQ5T0F9 858 aaKnown RBP26.44■■□□□ 1.82
GMDS-203ENST00000467288 CASZ1Q86V15 1759 aa26.43■■□□□ 1.82
GMDS-203ENST00000467288 MTHFSP49914 203 aa26.42■■□□□ 1.82
GMDS-203ENST00000467288 MTFR1LQ9H019 292 aa26.42■■□□□ 1.82
GMDS-203ENST00000467288 LY75O60449 1722 aa26.42■■□□□ 1.82
GMDS-203ENST00000467288 IL13P35225 146 aa26.41■■□□□ 1.82
GMDS-203ENST00000467288 TOGARAM1Q9Y4F4 1720 aa26.41■■□□□ 1.82
GMDS-203ENST00000467288 PHKG2P15735 406 aa26.39■■□□□ 1.82
GMDS-203ENST00000467288 IFNL2Q8IZJ0 200 aa26.39■■□□□ 1.82
GMDS-203ENST00000467288 SGIP1Q9BQI5 828 aa26.39■■□□□ 1.82
GMDS-203ENST00000467288 SYT17Q9BSW7 474 aa26.38■■□□□ 1.81
GMDS-203ENST00000467288 FHDC1Q9C0D6 1143 aaPredicted RBP26.38■■□□□ 1.81
GMDS-203ENST00000467288 ZNF827Q17R98 1081 aa26.37■■□□□ 1.81
GMDS-203ENST00000467288 AEBP1Q8IUX7 1158 aa26.37■■□□□ 1.81
GMDS-203ENST00000467288 KDRP35968 1356 aa26.36■■□□□ 1.81
GMDS-203ENST00000467288 MPRIPQ6WCQ1 1025 aa26.36■■□□□ 1.81
GMDS-203ENST00000467288 AKT1S1Q96B36 256 aa26.36■■□□□ 1.81
GMDS-203ENST00000467288 ITGB4P16144 1822 aa26.36■■□□□ 1.81
GMDS-203ENST00000467288 KCNQ4P56696 695 aa26.35■■□□□ 1.81
GMDS-203ENST00000467288 PLEKHO1Q53GL0 409 aaPredicted RBP26.35■■□□□ 1.81
GMDS-203ENST00000467288 SULT6B1Q6IMI4 303 aa26.34■■□□□ 1.81
GMDS-203ENST00000467288 CCNL1Q9UK58 526 aaPredicted RBP26.34■■□□□ 1.81
GMDS-203ENST00000467288 AMOTQ4VCS5 1084 aa26.33■■□□□ 1.81
GMDS-203ENST00000467288 PIGBQ92521 554 aa26.33■■□□□ 1.81
GMDS-203ENST00000467288 ARXQ96QS3 562 aa26.32■■□□□ 1.8
GMDS-203ENST00000467288 PALLDQ8WX93 1383 aa26.32■■□□□ 1.8
GMDS-203ENST00000467288 CNGB1Q14028 1251 aaPredicted RBP26.31■■□□□ 1.8
GMDS-203ENST00000467288 SMARCC1Q92922 1105 aaPredicted RBP26.31■■□□□ 1.8
GMDS-203ENST00000467288 UTRNP46939 3433 aa26.29■■□□□ 1.8
GMDS-203ENST00000467288 DIAPH1O60610 1272 aaKnown RBP26.29■■□□□ 1.8
GMDS-203ENST00000467288 HSP90AB1P08238 724 aaKnown RBP26.29■■□□□ 1.8
GMDS-203ENST00000467288 QSER1Q2KHR3 1735 aa26.28■■□□□ 1.8
GMDS-203ENST00000467288 ZNF530Q6P9A1 599 aaPredicted RBP26.28■■□□□ 1.8
GMDS-203ENST00000467288 TMOD3Q9NYL9 352 aa26.28■■□□□ 1.8
GMDS-203ENST00000467288 COL3A1P02461 1466 aaPredicted RBP26.28■■□□□ 1.8
GMDS-203ENST00000467288 DCAF5Q96JK2 942 aa26.27■■□□□ 1.8
GMDS-203ENST00000467288 PNPLA7Q6ZV29 1317 aa26.25■■□□□ 1.79
GMDS-203ENST00000467288 ERVV-2B6SEH9 535 aa26.25■■□□□ 1.79
GMDS-203ENST00000467288 KDM6AO15550 1401 aaPredicted RBP26.24■■□□□ 1.79
GMDS-203ENST00000467288 HMGB2P26583 209 aaKnown RBP26.24■■□□□ 1.79
GMDS-203ENST00000467288 SLC16A10Q8TF71 515 aa26.24■■□□□ 1.79
GMDS-203ENST00000467288 TFCP2L1Q9NZI6 479 aa26.24■■□□□ 1.79
GMDS-203ENST00000467288 HMOX1P09601 288 aa26.23■■□□□ 1.79
GMDS-203ENST00000467288 C1orf141Q5JVX7 400 aa26.23■■□□□ 1.79
GMDS-203ENST00000467288 ASAP1Q9ULH1 1129 aa26.23■■□□□ 1.79
GMDS-203ENST00000467288 TUBGCP6Q96RT7 1819 aa26.23■■□□□ 1.79
GMDS-203ENST00000467288 C5P01031 1676 aa26.22■■□□□ 1.79
GMDS-203ENST00000467288 TAF1LQ8IZX4 1826 aa26.21■■□□□ 1.79
GMDS-203ENST00000467288 ATG3Q9NT62 314 aa26.21■■□□□ 1.79
GMDS-203ENST00000467288 LOC102724428A0A0B4J2F2 783 aa26.2■■□□□ 1.78
GMDS-203ENST00000467288 SIK1P57059 783 aa26.2■■□□□ 1.78
GMDS-203ENST00000467288 MAP3K5Q99683 1374 aa26.19■■□□□ 1.78
GMDS-203ENST00000467288 POLD1P28340 1107 aa26.18■■□□□ 1.78
GMDS-203ENST00000467288 PPP2R1AP30153 589 aa26.18■■□□□ 1.78
GMDS-203ENST00000467288 ZNF784Q8NCA9 323 aaPredicted RBP26.18■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms