RNA–Protein interactions for RNA: ENST00000467171.2

APOBEC1-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 1, humanhuman

TSL 1 (best)

Gene APOBEC1, Length 861 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1-202ENST00000467171 MST1RQ04912 1400 aa12.42□□□□□ -0.42
APOBEC1-202ENST00000467171 USP54Q70EL1 1684 aa12.42□□□□□ -0.42
APOBEC1-202ENST00000467171 RIPK4P57078 832 aa12.41□□□□□ -0.42
APOBEC1-202ENST00000467171 HSP90AB2PQ58FF8 381 aa12.41□□□□□ -0.42
APOBEC1-202ENST00000467171 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.41□□□□□ -0.42
APOBEC1-202ENST00000467171 SPOCK2Q92563 424 aa12.41□□□□□ -0.42
APOBEC1-202ENST00000467171 RTL1A6NKG5 1358 aa12.41□□□□□ -0.42
APOBEC1-202ENST00000467171 ARHGEF10O15013 1369 aa12.41□□□□□ -0.42
APOBEC1-202ENST00000467171 ATF3P18847 181 aa12.4□□□□□ -0.42
APOBEC1-202ENST00000467171 IRX5P78411 483 aaPredicted RBP12.4□□□□□ -0.42
APOBEC1-202ENST00000467171 CALD1Q05682 793 aaKnown RBP12.4□□□□□ -0.42
APOBEC1-202ENST00000467171 LMOD3Q0VAK6 560 aa12.4□□□□□ -0.42
APOBEC1-202ENST00000467171 CADPS2Q86UW7 1296 aa12.4□□□□□ -0.42
APOBEC1-202ENST00000467171 KCNH5Q8NCM2 988 aa12.4□□□□□ -0.42
APOBEC1-202ENST00000467171 ORAI2Q96SN7 254 aa12.4□□□□□ -0.42
APOBEC1-202ENST00000467171 PIK3C2AO00443 1686 aa12.39□□□□□ -0.43
APOBEC1-202ENST00000467171 POTEMA6NI47 508 aa12.39□□□□□ -0.43
APOBEC1-202ENST00000467171 HMOX1P09601 288 aa12.39□□□□□ -0.43
APOBEC1-202ENST00000467171 AMPHP49418 695 aa12.39□□□□□ -0.43
APOBEC1-202ENST00000467171 PHACTR3Q96KR7 559 aa12.39□□□□□ -0.43
APOBEC1-202ENST00000467171 FOXO3O43524 673 aa12.38□□□□□ -0.43
APOBEC1-202ENST00000467171 MAP2P11137 1827 aaKnown RBP12.38□□□□□ -0.43
APOBEC1-202ENST00000467171 KDRP35968 1356 aa12.38□□□□□ -0.43
APOBEC1-202ENST00000467171 IGSF1Q8N6C5 1336 aa12.37□□□□□ -0.43
APOBEC1-202ENST00000467171 HOXC9P31274 260 aa12.37□□□□□ -0.43
APOBEC1-202ENST00000467171 SULT6B1Q6IMI4 303 aa12.37□□□□□ -0.43
APOBEC1-202ENST00000467171 KRT28Q7Z3Y7 464 aa12.37□□□□□ -0.43
APOBEC1-202ENST00000467171 MSH6P52701 1360 aa12.37□□□□□ -0.43
APOBEC1-202ENST00000467171 USP19O94966 1318 aa12.37□□□□□ -0.43
APOBEC1-202ENST00000467171 RGPD8O14715 1765 aaPredicted RBP12.36□□□□□ -0.43
APOBEC1-202ENST00000467171 RARSP54136 660 aaKnown RBP12.36□□□□□ -0.43
APOBEC1-202ENST00000467171 POTEGQ6S5H5 508 aa12.36□□□□□ -0.43
APOBEC1-202ENST00000467171 IP6K1Q92551 441 aa12.36□□□□□ -0.43
APOBEC1-202ENST00000467171 OCEL1Q9H607 264 aa12.36□□□□□ -0.43
APOBEC1-202ENST00000467171 FANCIQ9NVI1 1328 aa12.36□□□□□ -0.43
APOBEC1-202ENST00000467171 KIF1AQ12756 1690 aa12.35□□□□□ -0.43
APOBEC1-202ENST00000467171 PEAK1Q9H792 1746 aa12.35□□□□□ -0.43
APOBEC1-202ENST00000467171 SOX12O15370 315 aa12.35□□□□□ -0.43
APOBEC1-202ENST00000467171 IFT57Q9NWB7 429 aa12.35□□□□□ -0.43
APOBEC1-202ENST00000467171 SLIT3O75094 1523 aa12.34□□□□□ -0.43
APOBEC1-202ENST00000467171 NFAT5O94916 1531 aa12.34□□□□□ -0.43
APOBEC1-202ENST00000467171 PLIN1O60240 522 aa12.34□□□□□ -0.43
APOBEC1-202ENST00000467171 ZNF853P0CG23 659 aa12.34□□□□□ -0.43
APOBEC1-202ENST00000467171 PDE3AQ14432 1141 aa12.34□□□□□ -0.43
APOBEC1-202ENST00000467171 NUTM2GQ5VZR2 741 aa12.34□□□□□ -0.43
APOBEC1-202ENST00000467171 AEBP1Q8IUX7 1158 aa12.34□□□□□ -0.43
APOBEC1-202ENST00000467171 EXOC6Q8TAG9 804 aa12.34□□□□□ -0.43
APOBEC1-202ENST00000467171 ZNF428Q96B54 188 aa12.34□□□□□ -0.43
APOBEC1-202ENST00000467171 EYA1Q99502 592 aa12.34□□□□□ -0.43
APOBEC1-202ENST00000467171 NPHP3Q7Z494 1330 aa12.34□□□□□ -0.43
APOBEC1-202ENST00000467171 GCP02774 474 aa12.33□□□□□ -0.44
APOBEC1-202ENST00000467171 GNAI1P63096 354 aa12.33□□□□□ -0.44
APOBEC1-202ENST00000467171 B4GALNT3Q6L9W6 998 aa12.33□□□□□ -0.44
APOBEC1-202ENST00000467171 RGPD1P0DJD0 1748 aa12.32□□□□□ -0.44
APOBEC1-202ENST00000467171 BCAR3O75815 825 aa12.32□□□□□ -0.44
APOBEC1-202ENST00000467171 ARHGEF25Q86VW2 580 aa12.32□□□□□ -0.44
APOBEC1-202ENST00000467171 CCDC136Q96JN2 1154 aa12.32□□□□□ -0.44
APOBEC1-202ENST00000467171 CRBNQ96SW2 442 aa12.32□□□□□ -0.44
APOBEC1-202ENST00000467171 CIZ1Q9ULV3 898 aaPredicted RBP12.32□□□□□ -0.44
APOBEC1-202ENST00000467171 MARF1Q9Y4F3 1742 aaKnown RBP12.31□□□□□ -0.44
APOBEC1-202ENST00000467171 STRCP1A6NGW2 1772 aa12.31□□□□□ -0.44
APOBEC1-202ENST00000467171 HTATSF1O43719 755 aaKnown RBP12.31□□□□□ -0.44
APOBEC1-202ENST00000467171 EXOSC9Q06265 439 aaKnown RBP12.31□□□□□ -0.44
APOBEC1-202ENST00000467171 GAS2L2Q8NHY3 880 aa12.31□□□□□ -0.44
APOBEC1-202ENST00000467171 FAM163AQ96GL9 167 aaPredicted RBP12.31□□□□□ -0.44
APOBEC1-202ENST00000467171 CFAP44Q96MT7 982 aa12.31□□□□□ -0.44
APOBEC1-202ENST00000467171 STRCQ7RTU9 1775 aa12.3□□□□□ -0.44
APOBEC1-202ENST00000467171 BRPF1P55201 1214 aaPredicted RBP12.3□□□□□ -0.44
APOBEC1-202ENST00000467171 AAMPQ13685 434 aa12.3□□□□□ -0.44
APOBEC1-202ENST00000467171 C20orf194Q5TEA3 1177 aa12.3□□□□□ -0.44
APOBEC1-202ENST00000467171 TSR2Q969E8 191 aaKnown RBP12.3□□□□□ -0.44
APOBEC1-202ENST00000467171 ZNF335Q9H4Z2 1342 aaPredicted RBP12.3□□□□□ -0.44
APOBEC1-202ENST00000467171 PSEN1P49768 467 aa12.29□□□□□ -0.44
APOBEC1-202ENST00000467171 XPCQ01831 940 aaPredicted RBP12.29□□□□□ -0.44
APOBEC1-202ENST00000467171 ALDH1L2Q3SY69 923 aa12.29□□□□□ -0.44
APOBEC1-202ENST00000467171 MS4A1P11836 297 aa12.28□□□□□ -0.44
APOBEC1-202ENST00000467171 MTHFSDQ2M296 383 aaKnown RBP12.28□□□□□ -0.44
APOBEC1-202ENST00000467171 LCE2DQ5TA82 110 aaPredicted RBP12.28□□□□□ -0.44
APOBEC1-202ENST00000467171 BRINP3Q76B58 766 aa12.28□□□□□ -0.44
APOBEC1-202ENST00000467171 PHRF1Q9P1Y6 1649 aaKnown RBP12.28□□□□□ -0.44
APOBEC1-202ENST00000467171 TRPM3Q9HCF6 1732 aaPredicted RBP12.28□□□□□ -0.44
APOBEC1-202ENST00000467171 TNS3Q68CZ2 1445 aa12.28□□□□□ -0.44
APOBEC1-202ENST00000467171 CHL1O00533 1208 aa12.27□□□□□ -0.45
APOBEC1-202ENST00000467171 MKRN3Q13064 507 aaKnown RBP12.27□□□□□ -0.45
APOBEC1-202ENST00000467171 PDAP1Q13442 181 aaKnown RBP12.27□□□□□ -0.45
APOBEC1-202ENST00000467171 SLAIN1Q8ND83 568 aa12.27□□□□□ -0.45
APOBEC1-202ENST00000467171 SLAIN2Q9P270 581 aa12.27□□□□□ -0.45
APOBEC1-202ENST00000467171 SPATA31A3Q5VYP0 1347 aa12.27□□□□□ -0.45
APOBEC1-202ENST00000467171 NCAPD2Q15021 1401 aa12.27□□□□□ -0.45
APOBEC1-202ENST00000467171 HAP1P54257 671 aaPredicted RBP12.26□□□□□ -0.45
APOBEC1-202ENST00000467171 THUMPD2Q9BTF0 503 aaKnown RBP12.26□□□□□ -0.45
APOBEC1-202ENST00000467171 MBIPQ9NS73 344 aa12.26□□□□□ -0.45
APOBEC1-202ENST00000467171 SOS2Q07890 1332 aaPredicted RBP12.26□□□□□ -0.45
APOBEC1-202ENST00000467171 PXDNQ92626 1479 aa12.26□□□□□ -0.45
APOBEC1-202ENST00000467171 VAMP4O75379 141 aa12.25□□□□□ -0.45
APOBEC1-202ENST00000467171 CANXP27824 592 aaKnown RBP12.25□□□□□ -0.45
APOBEC1-202ENST00000467171 NBPF6Q5VWK0 638 aa12.25□□□□□ -0.45
APOBEC1-202ENST00000467171 ZKSCAN2Q63HK3 967 aa12.25□□□□□ -0.45
APOBEC1-202ENST00000467171 LMOD2Q6P5Q4 547 aa12.25□□□□□ -0.45
APOBEC1-202ENST00000467171 SSH1Q8WYL5 1049 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms