RNA–Protein interactions for RNA: ENST00000466351.1

CDHR3-204, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 362 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-204ENST00000466351 BCL2L13Q9BXK5 485 aa8.62□□□□□ -1.03
CDHR3-204ENST00000466351 LTN1O94822 1766 aa8.62□□□□□ -1.03
CDHR3-204ENST00000466351 CAMTA1Q9Y6Y1 1673 aa8.62□□□□□ -1.03
CDHR3-204ENST00000466351 ADGRL3Q9HAR2 1447 aa8.62□□□□□ -1.03
CDHR3-204ENST00000466351 ZBTB7BO15156 539 aaPredicted RBP8.61□□□□□ -1.03
CDHR3-204ENST00000466351 TWISTNBQ3B726 338 aaPredicted RBP8.61□□□□□ -1.03
CDHR3-204ENST00000466351 INTS3Q68E01 1043 aaKnown RBP8.61□□□□□ -1.03
CDHR3-204ENST00000466351 CHMP4AQ9BY43 222 aa8.61□□□□□ -1.03
CDHR3-204ENST00000466351 BCL11AQ9H165 835 aa8.61□□□□□ -1.03
CDHR3-204ENST00000466351 MBIPQ9NS73 344 aa8.61□□□□□ -1.03
CDHR3-204ENST00000466351 EMILIN1Q9Y6C2 1016 aa8.61□□□□□ -1.03
CDHR3-204ENST00000466351 RGS12O14924 1447 aa8.61□□□□□ -1.03
CDHR3-204ENST00000466351 MED1Q15648 1581 aaPredicted RBP8.61□□□□□ -1.03
CDHR3-204ENST00000466351 IGSF1Q8N6C5 1336 aa8.6□□□□□ -1.03
CDHR3-204ENST00000466351 LMO7Q8WWI1 1683 aa8.6□□□□□ -1.03
CDHR3-204ENST00000466351 CHL1O00533 1208 aa8.6□□□□□ -1.03
CDHR3-204ENST00000466351 TXNDC2Q86VQ3 553 aa8.6□□□□□ -1.03
CDHR3-204ENST00000466351 CHD1LQ86WJ1 897 aa8.6□□□□□ -1.03
CDHR3-204ENST00000466351 SKAP1Q86WV1 359 aa8.6□□□□□ -1.03
CDHR3-204ENST00000466351 THEMISQ8N1K5 641 aaPredicted RBP8.6□□□□□ -1.03
CDHR3-204ENST00000466351 SNX21Q969T3 373 aa8.6□□□□□ -1.03
CDHR3-204ENST00000466351 ANTXR1Q9H6X2 564 aa8.6□□□□□ -1.03
CDHR3-204ENST00000466351 CIZ1Q9ULV3 898 aaPredicted RBP8.6□□□□□ -1.03
CDHR3-204ENST00000466351 OVOS2A0A0G2JMS6 1433 aa8.6□□□□□ -1.03
CDHR3-204ENST00000466351 CRB1P82279 1406 aa8.6□□□□□ -1.03
CDHR3-204ENST00000466351 ATP10DQ9P241 1426 aa8.6□□□□□ -1.03
CDHR3-204ENST00000466351 NWD1Q149M9 1564 aa8.6□□□□□ -1.03
CDHR3-204ENST00000466351 ABCC6O95255 1503 aa8.59□□□□□ -1.03
CDHR3-204ENST00000466351 KIF1AQ12756 1690 aa8.59□□□□□ -1.03
CDHR3-204ENST00000466351 ACEP12821 1306 aa8.59□□□□□ -1.03
CDHR3-204ENST00000466351 KDM3BQ7LBC6 1761 aa8.59□□□□□ -1.03
CDHR3-204ENST00000466351 PTMSP20962 102 aa8.59□□□□□ -1.03
CDHR3-204ENST00000466351 EIF4A2Q14240 407 aaKnown RBP8.59□□□□□ -1.03
CDHR3-204ENST00000466351 GSE1Q14687 1217 aa8.59□□□□□ -1.03
CDHR3-204ENST00000466351 PHACTR3Q96KR7 559 aa8.59□□□□□ -1.03
CDHR3-204ENST00000466351 ISY1Q9ULR0 285 aaKnown RBP8.59□□□□□ -1.03
CDHR3-204ENST00000466351 TNNQ9UQP3 1299 aa8.59□□□□□ -1.03
CDHR3-204ENST00000466351 MST1RQ04912 1400 aa8.58□□□□□ -1.04
CDHR3-204ENST00000466351 NCAPD2Q15021 1401 aa8.58□□□□□ -1.04
CDHR3-204ENST00000466351 RPAP2Q8IXW5 612 aaPredicted RBP8.58□□□□□ -1.04
CDHR3-204ENST00000466351 GAS2L2Q8NHY3 880 aa8.58□□□□□ -1.04
CDHR3-204ENST00000466351 C22orf23Q9BZE7 217 aa8.58□□□□□ -1.04
CDHR3-204ENST00000466351 LAS1LQ9Y4W2 734 aaKnown RBP8.58□□□□□ -1.04
CDHR3-204ENST00000466351 ADAMTSL3P82987 1691 aa8.58□□□□□ -1.04
CDHR3-204ENST00000466351 ADAMTS7Q9UKP4 1686 aa8.57□□□□□ -1.04
CDHR3-204ENST00000466351 LTKP29376 864 aa8.57□□□□□ -1.04
CDHR3-204ENST00000466351 NFAT5O94916 1531 aa8.57□□□□□ -1.04
CDHR3-204ENST00000466351 IBTKQ9P2D0 1353 aaPredicted RBP8.57□□□□□ -1.04
CDHR3-204ENST00000466351 HMOX1P09601 288 aa8.56□□□□□ -1.04
CDHR3-204ENST00000466351 MLECQ14165 292 aa8.56□□□□□ -1.04
CDHR3-204ENST00000466351 TBC1D2Q9BYX2 928 aa8.56□□□□□ -1.04
CDHR3-204ENST00000466351 CHMP5Q9NZZ3 219 aa8.56□□□□□ -1.04
CDHR3-204ENST00000466351 MSH6P52701 1360 aa8.56□□□□□ -1.04
CDHR3-204ENST00000466351 SLIT3O75094 1523 aa8.55□□□□□ -1.04
CDHR3-204ENST00000466351 AK9Q5TCS8 1911 aa8.55□□□□□ -1.04
CDHR3-204ENST00000466351 EPB41L2O43491 1005 aaKnown RBP8.55□□□□□ -1.04
CDHR3-204ENST00000466351 HMMRO75330 724 aa8.55□□□□□ -1.04
CDHR3-204ENST00000466351 SEC24BO95487 1268 aa8.55□□□□□ -1.04
CDHR3-204ENST00000466351 HSCBQ8IWL3 235 aa8.55□□□□□ -1.04
CDHR3-204ENST00000466351 ANKRD44Q8N8A2 993 aa8.55□□□□□ -1.04
CDHR3-204ENST00000466351 DCTPP1Q9H773 170 aa8.55□□□□□ -1.04
CDHR3-204ENST00000466351 MAP3K19Q56UN5 1328 aa8.54□□□□□ -1.04
CDHR3-204ENST00000466351 SIPA1L3O60292 1781 aaPredicted RBP8.54□□□□□ -1.04
CDHR3-204ENST00000466351 DDX11L8A8MPP1 907 aa8.54□□□□□ -1.04
CDHR3-204ENST00000466351 CDC45O75419 566 aa8.54□□□□□ -1.04
CDHR3-204ENST00000466351 HOXB7P09629 217 aa8.54□□□□□ -1.04
CDHR3-204ENST00000466351 CCT4P50991 539 aaKnown RBP8.54□□□□□ -1.04
CDHR3-204ENST00000466351 RRS1Q15050 365 aaKnown RBP8.54□□□□□ -1.04
CDHR3-204ENST00000466351 SULT6B1Q6IMI4 303 aa8.54□□□□□ -1.04
CDHR3-204ENST00000466351 TSPYL6Q8N831 410 aa8.54□□□□□ -1.04
CDHR3-204ENST00000466351 AMOTL2Q9Y2J4 779 aa8.54□□□□□ -1.04
CDHR3-204ENST00000466351 TRPM3Q9HCF6 1732 aaPredicted RBP8.54□□□□□ -1.04
CDHR3-204ENST00000466351 MAP3K5Q99683 1374 aa8.53□□□□□ -1.04
CDHR3-204ENST00000466351 DDIT3P35638 169 aa8.53□□□□□ -1.04
CDHR3-204ENST00000466351 C8orf58Q8NAV2 365 aa8.53□□□□□ -1.04
CDHR3-204ENST00000466351 OSBPL3Q9H4L5 887 aa8.53□□□□□ -1.04
CDHR3-204ENST00000466351 CRYBG1Q9Y4K1 1723 aa8.53□□□□□ -1.04
CDHR3-204ENST00000466351 AOX1Q06278 1338 aa8.53□□□□□ -1.04
CDHR3-204ENST00000466351 CEMIPQ8WUJ3 1361 aa8.52□□□□□ -1.05
CDHR3-204ENST00000466351 L1TD1Q5T7N2 865 aaKnown RBP8.52□□□□□ -1.05
CDHR3-204ENST00000466351 CASC1Q6TDU7 716 aa8.52□□□□□ -1.05
CDHR3-204ENST00000466351 CLEC17AQ6ZS10 378 aa8.52□□□□□ -1.05
CDHR3-204ENST00000466351 RTF1Q92541 710 aaKnown RBP8.52□□□□□ -1.05
CDHR3-204ENST00000466351 SIRT2Q8IXJ6 389 aa8.51□□□□□ -1.05
CDHR3-204ENST00000466351 LNPKQ9C0E8 428 aa8.51□□□□□ -1.05
CDHR3-204ENST00000466351 ZRANB1Q9UGI0 708 aa8.51□□□□□ -1.05
CDHR3-204ENST00000466351 FRAT2O75474 233 aaPredicted RBP8.5□□□□□ -1.05
CDHR3-204ENST00000466351 GNAI3P08754 354 aa8.5□□□□□ -1.05
CDHR3-204ENST00000466351 DCCP43146 1447 aa8.5□□□□□ -1.05
CDHR3-204ENST00000466351 MFAP1P55081 439 aaKnown RBP8.5□□□□□ -1.05
CDHR3-204ENST00000466351 RABEP1Q15276 862 aa8.5□□□□□ -1.05
CDHR3-204ENST00000466351 TTC22Q5TAA0 569 aa8.5□□□□□ -1.05
CDHR3-204ENST00000466351 ANKRD45Q5TZF3 282 aa8.5□□□□□ -1.05
CDHR3-204ENST00000466351 CCDC30Q5VVM6 783 aa8.5□□□□□ -1.05
CDHR3-204ENST00000466351 CEP85Q6P2H3 762 aa8.5□□□□□ -1.05
CDHR3-204ENST00000466351 IL17RAQ96F46 866 aa8.5□□□□□ -1.05
CDHR3-204ENST00000466351 THUMPD2Q9BTF0 503 aaKnown RBP8.5□□□□□ -1.05
CDHR3-204ENST00000466351 STK31Q9BXU1 1019 aa8.5□□□□□ -1.05
CDHR3-204ENST00000466351 PARP4Q9UKK3 1724 aaKnown RBP8.5□□□□□ -1.05
CDHR3-204ENST00000466351 ALS2Q96Q42 1657 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms