RNA–Protein interactions for RNA: ENST00000466032.1

CHMP3-206, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 436 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-206ENST00000466032 NSD3Q9BZ95 1437 aa8.11□□□□□ -1.11
CHMP3-206ENST00000466032 ACEP12821 1306 aa8.1□□□□□ -1.11
CHMP3-206ENST00000466032 ZNF335Q9H4Z2 1342 aaPredicted RBP8.1□□□□□ -1.11
CHMP3-206ENST00000466032 PRR36Q9H6K5 1346 aa8.1□□□□□ -1.11
CHMP3-206ENST00000466032 NALCNQ8IZF0 1738 aa8.1□□□□□ -1.11
CHMP3-206ENST00000466032 CARD14Q9BXL6 1004 aa8.1□□□□□ -1.11
CHMP3-206ENST00000466032 IQSEC2Q5JU85 1478 aa8.1□□□□□ -1.11
CHMP3-206ENST00000466032 TOPAZ1Q8N9V7 1692 aa8.1□□□□□ -1.11
CHMP3-206ENST00000466032 KIF1AQ12756 1690 aa8.09□□□□□ -1.11
CHMP3-206ENST00000466032 C1orf167Q5SNV9 1468 aa8.09□□□□□ -1.11
CHMP3-206ENST00000466032 CD163L1Q9NR16 1453 aa8.09□□□□□ -1.11
CHMP3-206ENST00000466032 C2orf72A6NCS6 295 aa8.09□□□□□ -1.11
CHMP3-206ENST00000466032 SOX12O15370 315 aa8.09□□□□□ -1.11
CHMP3-206ENST00000466032 ESCO1Q5FWF5 840 aa8.09□□□□□ -1.11
CHMP3-206ENST00000466032 MORC1Q86VD1 984 aa8.09□□□□□ -1.11
CHMP3-206ENST00000466032 USP6P35125 1406 aa8.09□□□□□ -1.11
CHMP3-206ENST00000466032 NPHP3Q7Z494 1330 aa8.08□□□□□ -1.12
CHMP3-206ENST00000466032 ERICH6Q7L0X2 663 aa8.08□□□□□ -1.12
CHMP3-206ENST00000466032 COG3Q96JB2 828 aa8.08□□□□□ -1.12
CHMP3-206ENST00000466032 MST1RQ04912 1400 aa8.08□□□□□ -1.12
CHMP3-206ENST00000466032 STRCP1A6NGW2 1772 aa8.07□□□□□ -1.12
CHMP3-206ENST00000466032 AKAP12Q02952 1782 aa8.07□□□□□ -1.12
CHMP3-206ENST00000466032 TTC21BQ7Z4L5 1316 aa8.07□□□□□ -1.12
CHMP3-206ENST00000466032 FYB1O15117 783 aa8.07□□□□□ -1.12
CHMP3-206ENST00000466032 TOM1O60784 492 aa8.07□□□□□ -1.12
CHMP3-206ENST00000466032 CC2D1BQ5T0F9 858 aaKnown RBP8.07□□□□□ -1.12
CHMP3-206ENST00000466032 CFAP53Q96M91 514 aa8.07□□□□□ -1.12
CHMP3-206ENST00000466032 SLAIN2Q9P270 581 aa8.07□□□□□ -1.12
CHMP3-206ENST00000466032 INSRP06213 1382 aa8.07□□□□□ -1.12
CHMP3-206ENST00000466032 AATKQ6ZMQ8 1374 aa8.07□□□□□ -1.12
CHMP3-206ENST00000466032 USP31Q70CQ4 1352 aa8.07□□□□□ -1.12
CHMP3-206ENST00000466032 MON2Q7Z3U7 1717 aa8.06□□□□□ -1.12
CHMP3-206ENST00000466032 SSH2Q76I76 1423 aa8.06□□□□□ -1.12
CHMP3-206ENST00000466032 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.06□□□□□ -1.12
CHMP3-206ENST00000466032 SBNO1A3KN83 1393 aa8.06□□□□□ -1.12
CHMP3-206ENST00000466032 KIF24Q5T7B8 1368 aa8.06□□□□□ -1.12
CHMP3-206ENST00000466032 LTBP4Q8N2S1 1624 aa8.05□□□□□ -1.12
CHMP3-206ENST00000466032 NUTM2FA1L443 756 aa8.05□□□□□ -1.12
CHMP3-206ENST00000466032 KCNH5Q8NCM2 988 aa8.05□□□□□ -1.12
CHMP3-206ENST00000466032 PMFBP1Q8TBY8 1022 aa8.05□□□□□ -1.12
CHMP3-206ENST00000466032 ANKRD26Q9UPS8 1709 aa8.04□□□□□ -1.12
CHMP3-206ENST00000466032 PPP2R1AP30153 589 aa8.04□□□□□ -1.12
CHMP3-206ENST00000466032 NFX1Q12986 1120 aaKnown RBP8.04□□□□□ -1.12
CHMP3-206ENST00000466032 KRT28Q7Z3Y7 464 aa8.04□□□□□ -1.12
CHMP3-206ENST00000466032 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.04□□□□□ -1.12
CHMP3-206ENST00000466032 NGEFQ8N5V2 710 aa8.04□□□□□ -1.12
CHMP3-206ENST00000466032 PNNQ9H307 717 aaKnown RBP8.04□□□□□ -1.12
CHMP3-206ENST00000466032 MRS2Q9HD23 443 aa8.04□□□□□ -1.12
CHMP3-206ENST00000466032 NUDCQ9Y266 331 aa8.04□□□□□ -1.12
CHMP3-206ENST00000466032 ARHGEF10O15013 1369 aa8.04□□□□□ -1.12
CHMP3-206ENST00000466032 KIF20BQ96Q89 1820 aa8.03□□□□□ -1.12
CHMP3-206ENST00000466032 FOXO3O43524 673 aa8.03□□□□□ -1.12
CHMP3-206ENST00000466032 CENPBP07199 599 aaPredicted RBP8.03□□□□□ -1.12
CHMP3-206ENST00000466032 ABTB2Q8N961 1025 aa8.03□□□□□ -1.12
CHMP3-206ENST00000466032 RBM33Q96EV2 1170 aaKnown RBP8.03□□□□□ -1.12
CHMP3-206ENST00000466032 ORAI2Q96SN7 254 aa8.03□□□□□ -1.12
CHMP3-206ENST00000466032 XIRP1Q702N8 1843 aaKnown RBP8.03□□□□□ -1.12
CHMP3-206ENST00000466032 USP54Q70EL1 1684 aa8.02□□□□□ -1.13
CHMP3-206ENST00000466032 NRKQ7Z2Y5 1582 aa8.02□□□□□ -1.13
CHMP3-206ENST00000466032 NLRP6P59044 892 aa8.02□□□□□ -1.13
CHMP3-206ENST00000466032 BRINP3Q76B58 766 aa8.02□□□□□ -1.13
CHMP3-206ENST00000466032 ZBED2Q9BTP6 218 aa8.02□□□□□ -1.13
CHMP3-206ENST00000466032 GGNBP2Q9H3C7 697 aa8.02□□□□□ -1.13
CHMP3-206ENST00000466032 OVOS2A0A0J9YW53 1432 aa8.02□□□□□ -1.13
CHMP3-206ENST00000466032 OVOS2Q6IE36 1432 aa8.02□□□□□ -1.13
CHMP3-206ENST00000466032 RGPD8O14715 1765 aaPredicted RBP8.02□□□□□ -1.13
CHMP3-206ENST00000466032 WDR43Q15061 677 aaKnown RBP eCLIP8.01□□□□□ -1.13
CHMP3-206ENST00000466032 PTCD2Q8WV60 388 aaKnown RBP8.01□□□□□ -1.13
CHMP3-206ENST00000466032 KRTAP9-2Q9BYQ4 174 aa8.01□□□□□ -1.13
CHMP3-206ENST00000466032 SOS2Q07890 1332 aaPredicted RBP8.01□□□□□ -1.13
CHMP3-206ENST00000466032 RTL1A6NKG5 1358 aa8□□□□□ -1.13
CHMP3-206ENST00000466032 PNPLA6Q8IY17 1366 aa8□□□□□ -1.13
CHMP3-206ENST00000466032 MTHFSP49914 203 aa8□□□□□ -1.13
CHMP3-206ENST00000466032 NME9Q86XW9 330 aa8□□□□□ -1.13
CHMP3-206ENST00000466032 PNISRQ8TF01 805 aaKnown RBP8□□□□□ -1.13
CHMP3-206ENST00000466032 LRRC59Q96AG4 307 aaKnown RBP8□□□□□ -1.13
CHMP3-206ENST00000466032 NBPF3Q9H094 633 aa8□□□□□ -1.13
CHMP3-206ENST00000466032 SMG6Q86US8 1419 aaKnown RBP8□□□□□ -1.13
CHMP3-206ENST00000466032 SPATA31A3Q5VYP0 1347 aa8□□□□□ -1.13
CHMP3-206ENST00000466032 DGAT1O75907 488 aa7.99□□□□□ -1.13
CHMP3-206ENST00000466032 TNS3Q68CZ2 1445 aa7.99□□□□□ -1.13
CHMP3-206ENST00000466032 CDK12Q9NYV4 1490 aaPredicted RBP7.99□□□□□ -1.13
CHMP3-206ENST00000466032 DIAPH1O60610 1272 aaKnown RBP7.98□□□□□ -1.13
CHMP3-206ENST00000466032 NEFMP07197 916 aa7.98□□□□□ -1.13
CHMP3-206ENST00000466032 CERKQ8TCT0 537 aa7.98□□□□□ -1.13
CHMP3-206ENST00000466032 POLKQ9UBT6 870 aa7.98□□□□□ -1.13
CHMP3-206ENST00000466032 PXDNQ92626 1479 aa7.98□□□□□ -1.13
CHMP3-206ENST00000466032 USP19O94966 1318 aa7.98□□□□□ -1.13
CHMP3-206ENST00000466032 ABCC6O95255 1503 aa7.98□□□□□ -1.13
CHMP3-206ENST00000466032 FLT4P35916 1363 aa7.97□□□□□ -1.13
CHMP3-206ENST00000466032 AHDC1Q5TGY3 1603 aaPredicted RBP7.97□□□□□ -1.13
CHMP3-206ENST00000466032 KRTAP9-6A0A140TA67 174 aa7.97□□□□□ -1.13
CHMP3-206ENST00000466032 GCP02774 474 aa7.97□□□□□ -1.13
CHMP3-206ENST00000466032 AMPHP49418 695 aa7.97□□□□□ -1.13
CHMP3-206ENST00000466032 CNGB1Q14028 1251 aaPredicted RBP7.97□□□□□ -1.13
CHMP3-206ENST00000466032 ANKK1Q8NFD2 765 aa7.97□□□□□ -1.13
CHMP3-206ENST00000466032 TRPM3Q9HCF6 1732 aaPredicted RBP7.97□□□□□ -1.13
CHMP3-206ENST00000466032 SLIT3O75094 1523 aa7.97□□□□□ -1.13
CHMP3-206ENST00000466032 MED1Q15648 1581 aaPredicted RBP7.97□□□□□ -1.13
CHMP3-206ENST00000466032 NHSL1Q5SYE7 1610 aa7.96□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms