RNA–Protein interactions for RNA: ENST00000466010.1

TPM3-214, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 461 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-214ENST00000466010 TTC13Q8NBP0 860 aa9.39□□□□□ -0.91
TPM3-214ENST00000466010 PCDHGA4Q9Y5G9 962 aa9.39□□□□□ -0.91
TPM3-214ENST00000466010 METP08581 1390 aa9.38□□□□□ -0.91
TPM3-214ENST00000466010 RGS22Q8NE09 1264 aa9.38□□□□□ -0.91
TPM3-214ENST00000466010 ZDHHC16Q969W1 377 aa9.38□□□□□ -0.91
TPM3-214ENST00000466010 PBXIP1Q96AQ6 731 aa9.38□□□□□ -0.91
TPM3-214ENST00000466010 PTPRUQ92729 1446 aa9.38□□□□□ -0.91
TPM3-214ENST00000466010 JCADQ9P266 1359 aa9.37□□□□□ -0.91
TPM3-214ENST00000466010 AP1G2O75843 785 aa9.37□□□□□ -0.91
TPM3-214ENST00000466010 GJA5P36382 358 aa9.37□□□□□ -0.91
TPM3-214ENST00000466010 FOSBP53539 338 aa9.37□□□□□ -0.91
TPM3-214ENST00000466010 PRSS12P56730 875 aa9.37□□□□□ -0.91
TPM3-214ENST00000466010 RSBN1LQ6PCB5 846 aaPredicted RBP9.37□□□□□ -0.91
TPM3-214ENST00000466010 ILDR2Q71H61 639 aa9.37□□□□□ -0.91
TPM3-214ENST00000466010 TBC1D2BQ9UPU7 963 aa9.37□□□□□ -0.91
TPM3-214ENST00000466010 USTQ9Y2C2 406 aa9.37□□□□□ -0.91
TPM3-214ENST00000466010 SPATA31E1Q6ZUB1 1445 aa9.37□□□□□ -0.91
TPM3-214ENST00000466010 ADGRL3Q9HAR2 1447 aa9.37□□□□□ -0.91
TPM3-214ENST00000466010 CD46P15529 392 aa9.36□□□□□ -0.91
TPM3-214ENST00000466010 CSPP1Q1MSJ5 1256 aa9.36□□□□□ -0.91
TPM3-214ENST00000466010 MTMR7Q9Y216 660 aa9.36□□□□□ -0.91
TPM3-214ENST00000466010 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.36□□□□□ -0.91
TPM3-214ENST00000466010 RAB3GAP2Q9H2M9 1393 aa9.36□□□□□ -0.91
TPM3-214ENST00000466010 SPATA31A6Q5VVP1 1343 aa9.35□□□□□ -0.91
TPM3-214ENST00000466010 AHDC1Q5TGY3 1603 aaPredicted RBP9.35□□□□□ -0.91
TPM3-214ENST00000466010 PPLO60437 1756 aa9.35□□□□□ -0.91
TPM3-214ENST00000466010 POM121CA8CG34 1229 aa9.35□□□□□ -0.91
TPM3-214ENST00000466010 CSB-PGBD3P0DP91 1061 aa9.35□□□□□ -0.91
TPM3-214ENST00000466010 KCNA1Q09470 495 aa9.35□□□□□ -0.91
TPM3-214ENST00000466010 ZNF454Q8N9F8 522 aa9.35□□□□□ -0.91
TPM3-214ENST00000466010 STAC3Q96MF2 364 aa9.35□□□□□ -0.91
TPM3-214ENST00000466010 NUTM2BA6NNL0 878 aaPredicted RBP9.34□□□□□ -0.91
TPM3-214ENST00000466010 NUTM2EB1AL46 878 aaPredicted RBP9.34□□□□□ -0.91
TPM3-214ENST00000466010 HAX1O00165 279 aa9.34□□□□□ -0.91
TPM3-214ENST00000466010 USP17L8P0C7I0 530 aa9.34□□□□□ -0.91
TPM3-214ENST00000466010 WASHC4Q2M389 1173 aa9.34□□□□□ -0.91
TPM3-214ENST00000466010 NUTM2AQ8IVF1 878 aaPredicted RBP9.34□□□□□ -0.91
TPM3-214ENST00000466010 ZNF710Q8N1W2 664 aa9.34□□□□□ -0.91
TPM3-214ENST00000466010 CDCA7LQ96GN5 454 aa9.34□□□□□ -0.91
TPM3-214ENST00000466010 COLQQ9Y215 455 aaPredicted RBP9.34□□□□□ -0.91
TPM3-214ENST00000466010 NDUFB9Q9Y6M9 179 aa9.34□□□□□ -0.91
TPM3-214ENST00000466010 PHLPP1O60346 1717 aa9.34□□□□□ -0.92
TPM3-214ENST00000466010 TECPR2O15040 1411 aa9.33□□□□□ -0.92
TPM3-214ENST00000466010 MST1RQ04912 1400 aa9.33□□□□□ -0.92
TPM3-214ENST00000466010 RCCD1A6NED2 376 aa9.33□□□□□ -0.92
TPM3-214ENST00000466010 BRD1O95696 1058 aa9.33□□□□□ -0.92
TPM3-214ENST00000466010 RGL3Q3MIN7 710 aa9.33□□□□□ -0.92
TPM3-214ENST00000466010 BRINP3Q76B58 766 aa9.33□□□□□ -0.92
TPM3-214ENST00000466010 SLC39A7Q92504 469 aa9.33□□□□□ -0.92
TPM3-214ENST00000466010 PIK3C2GO75747 1445 aa9.32□□□□□ -0.92
TPM3-214ENST00000466010 ASXL1Q8IXJ9 1541 aa9.32□□□□□ -0.92
TPM3-214ENST00000466010 COL16A1Q07092 1604 aaPredicted RBP9.32□□□□□ -0.92
TPM3-214ENST00000466010 MOXD2PA6NHM9 499 aa9.32□□□□□ -0.92
TPM3-214ENST00000466010 LILRB3O75022 631 aa9.32□□□□□ -0.92
TPM3-214ENST00000466010 MYOM2P54296 1465 aa9.32□□□□□ -0.92
TPM3-214ENST00000466010 SETD1AO15047 1707 aaKnown RBP9.31□□□□□ -0.92
TPM3-214ENST00000466010 DDX11L8A8MPP1 907 aa9.31□□□□□ -0.92
TPM3-214ENST00000466010 PRPF38BQ5VTL8 546 aaKnown RBP9.31□□□□□ -0.92
TPM3-214ENST00000466010 LRRC59Q96AG4 307 aaKnown RBP9.31□□□□□ -0.92
TPM3-214ENST00000466010 LRPPRCP42704 1394 aaKnown RBP9.31□□□□□ -0.92
TPM3-214ENST00000466010 ABCC11Q96J66 1382 aa9.31□□□□□ -0.92
TPM3-214ENST00000466010 ROBO2Q9HCK4 1378 aa9.31□□□□□ -0.92
TPM3-214ENST00000466010 ADGRF5Q8IZF2 1346 aa9.31□□□□□ -0.92
TPM3-214ENST00000466010 DNAJB2P25686 324 aa9.3□□□□□ -0.92
TPM3-214ENST00000466010 QPCTQ16769 361 aa9.3□□□□□ -0.92
TPM3-214ENST00000466010 SIRT1Q96EB6 747 aa9.3□□□□□ -0.92
TPM3-214ENST00000466010 LAMC1P11047 1609 aa9.3□□□□□ -0.92
TPM3-214ENST00000466010 CDC42BPGQ6DT37 1551 aa9.29□□□□□ -0.92
TPM3-214ENST00000466010 C1orf167Q5SNV9 1468 aa9.29□□□□□ -0.92
TPM3-214ENST00000466010 NRXN1Q9ULB1 1477 aa9.29□□□□□ -0.92
TPM3-214ENST00000466010 NALCNQ8IZF0 1738 aa9.29□□□□□ -0.92
TPM3-214ENST00000466010 IFT172Q9UG01 1749 aa9.29□□□□□ -0.92
TPM3-214ENST00000466010 RBM25P49756 843 aaKnown RBP9.29□□□□□ -0.92
TPM3-214ENST00000466010 HDGFL1Q5TGJ6 251 aa9.29□□□□□ -0.92
TPM3-214ENST00000466010 ZBTB3Q9H5J0 574 aa9.29□□□□□ -0.92
TPM3-214ENST00000466010 C14orf93Q9H972 538 aaKnown RBP9.29□□□□□ -0.92
TPM3-214ENST00000466010 SHPRHQ149N8 1683 aa9.29□□□□□ -0.92
TPM3-214ENST00000466010 DHX57Q6P158 1386 aaKnown RBP9.28□□□□□ -0.92
TPM3-214ENST00000466010 C7P10643 843 aa9.28□□□□□ -0.92
TPM3-214ENST00000466010 RFX1P22670 979 aa9.28□□□□□ -0.92
TPM3-214ENST00000466010 MEX3CQ5U5Q3 659 aaKnown RBP9.28□□□□□ -0.92
TPM3-214ENST00000466010 ZNF772Q68DY9 489 aaPredicted RBP9.28□□□□□ -0.92
TPM3-214ENST00000466010 DCBLD2Q96PD2 775 aa9.28□□□□□ -0.92
TPM3-214ENST00000466010 ADAM33Q9BZ11 813 aa9.28□□□□□ -0.92
TPM3-214ENST00000466010 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.28□□□□□ -0.92
TPM3-214ENST00000466010 YTHDC2Q9H6S0 1430 aaKnown RBP9.28□□□□□ -0.92
TPM3-214ENST00000466010 NHSL1Q5SYE7 1610 aa9.27□□□□□ -0.92
TPM3-214ENST00000466010 NBPF26B4DH59 902 aa9.27□□□□□ -0.93
TPM3-214ENST00000466010 RTL5Q5HYW3 569 aaPredicted RBP9.27□□□□□ -0.93
TPM3-214ENST00000466010 FOXD4L5Q5VV16 416 aaPredicted RBP9.27□□□□□ -0.93
TPM3-214ENST00000466010 FOXD4L4Q8WXT5 416 aaPredicted RBP9.27□□□□□ -0.93
TPM3-214ENST00000466010 NPHP3Q7Z494 1330 aa9.27□□□□□ -0.93
TPM3-214ENST00000466010 KNDC1Q76NI1 1749 aa9.26□□□□□ -0.93
TPM3-214ENST00000466010 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.26□□□□□ -0.93
TPM3-214ENST00000466010 NDUFV2P19404 249 aa9.26□□□□□ -0.93
TPM3-214ENST00000466010 USP46P62068 366 aa9.26□□□□□ -0.93
TPM3-214ENST00000466010 EYA1Q99502 592 aa9.26□□□□□ -0.93
TPM3-214ENST00000466010 RGS17Q9UGC6 210 aaPredicted RBP9.26□□□□□ -0.93
TPM3-214ENST00000466010 SOS2Q07890 1332 aaPredicted RBP9.26□□□□□ -0.93
TPM3-214ENST00000466010 RDH13Q8NBN7 331 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms