RNA–Protein interactions for RNA: ENST00000465756.5

NPHP3-203, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 3,852 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-203ENST00000465756 MTHFSP49914 203 aa14.37□□□□□ -0.11
NPHP3-203ENST00000465756 DISP2A7MBM2 1401 aa14.36□□□□□ -0.11
NPHP3-203ENST00000465756 EIF4A2Q14240 407 aaKnown RBP14.36□□□□□ -0.11
NPHP3-203ENST00000465756 NBPF6Q5VWK0 638 aa14.36□□□□□ -0.11
NPHP3-203ENST00000465756 NBPF4Q96M43 638 aa14.36□□□□□ -0.11
NPHP3-203ENST00000465756 GAS2L2Q8NHY3 880 aa14.35□□□□□ -0.11
NPHP3-203ENST00000465756 DCAF8L1A6NGE4 600 aa14.35□□□□□ -0.11
NPHP3-203ENST00000465756 PLSCR1O15162 318 aa14.34□□□□□ -0.11
NPHP3-203ENST00000465756 ZNF530Q6P9A1 599 aaPredicted RBP14.34□□□□□ -0.11
NPHP3-203ENST00000465756 EYA1Q99502 592 aa14.34□□□□□ -0.11
NPHP3-203ENST00000465756 ZNF316A6NFI3 1004 aaPredicted RBP14.33□□□□□ -0.12
NPHP3-203ENST00000465756 MARCH10Q8NA82 808 aaPredicted RBP14.33□□□□□ -0.12
NPHP3-203ENST00000465756 MAPK8IP3Q9UPT6 1336 aa14.33□□□□□ -0.12
NPHP3-203ENST00000465756 TMOD3Q9NYL9 352 aa14.33□□□□□ -0.12
NPHP3-203ENST00000465756 IGSF1Q8N6C5 1336 aa14.32□□□□□ -0.12
NPHP3-203ENST00000465756 DDX10Q13206 875 aaKnown RBP14.32□□□□□ -0.12
NPHP3-203ENST00000465756 USHBP1Q8N6Y0 703 aa14.32□□□□□ -0.12
NPHP3-203ENST00000465756 SULT6B1Q6IMI4 303 aa14.32□□□□□ -0.12
NPHP3-203ENST00000465756 PER1O15534 1290 aaPredicted RBP14.32□□□□□ -0.12
NPHP3-203ENST00000465756 WDR43Q15061 677 aaKnown RBP eCLIP14.32□□□□□ -0.12
NPHP3-203ENST00000465756 SLC27A3Q5K4L6 730 aa14.32□□□□□ -0.12
NPHP3-203ENST00000465756 NPM2Q86SE8 214 aaKnown RBP14.31□□□□□ -0.12
NPHP3-203ENST00000465756 RTF1Q92541 710 aaKnown RBP14.31□□□□□ -0.12
NPHP3-203ENST00000465756 EN1Q05925 392 aaPredicted RBP14.31□□□□□ -0.12
NPHP3-203ENST00000465756 ANP32CO43423 234 aa14.3□□□□□ -0.12
NPHP3-203ENST00000465756 KAT6BQ8WYB5 2073 aa14.3□□□□□ -0.12
NPHP3-203ENST00000465756 MAP2P11137 1827 aaKnown RBP14.3□□□□□ -0.12
NPHP3-203ENST00000465756 FBLN1P23142 703 aa14.3□□□□□ -0.12
NPHP3-203ENST00000465756 DCAF5Q96JK2 942 aa14.3□□□□□ -0.12
NPHP3-203ENST00000465756 BRWD3Q6RI45 1802 aa14.3□□□□□ -0.12
NPHP3-203ENST00000465756 RGPD5Q99666 1765 aa14.3□□□□□ -0.12
NPHP3-203ENST00000465756 U2AF1L5P0DN76 240 aaPredicted RBP14.3□□□□□ -0.12
NPHP3-203ENST00000465756 U2AF1Q01081 240 aaKnown RBP eCLIP14.3□□□□□ -0.12
NPHP3-203ENST00000465756 ACSBG1Q96GR2 724 aa14.3□□□□□ -0.12
NPHP3-203ENST00000465756 FAM182BQ5T319 152 aa14.29□□□□□ -0.12
NPHP3-203ENST00000465756 CABP4P57796 275 aa14.29□□□□□ -0.12
NPHP3-203ENST00000465756 DEFB132Q7Z7B7 95 aa14.29□□□□□ -0.12
NPHP3-203ENST00000465756 FLAD1Q8NFF5 587 aa14.29□□□□□ -0.12
NPHP3-203ENST00000465756 LRRC37A3O60309 1634 aa14.29□□□□□ -0.12
NPHP3-203ENST00000465756 PPP2R1AP30153 589 aa14.28□□□□□ -0.12
NPHP3-203ENST00000465756 LMOD3Q0VAK6 560 aa14.28□□□□□ -0.12
NPHP3-203ENST00000465756 ERVV-2B6SEH9 535 aa14.28□□□□□ -0.12
NPHP3-203ENST00000465756 WNK3Q9BYP7 1800 aa14.28□□□□□ -0.12
NPHP3-203ENST00000465756 MYBBP1AQ9BQG0 1328 aaKnown RBP14.27□□□□□ -0.12
NPHP3-203ENST00000465756 IL13P35225 146 aa14.27□□□□□ -0.13
NPHP3-203ENST00000465756 TEFQ10587 303 aa14.27□□□□□ -0.13
NPHP3-203ENST00000465756 AKAP4Q5JQC9 854 aa14.27□□□□□ -0.13
NPHP3-203ENST00000465756 PRIM1P49642 420 aaKnown RBP14.26□□□□□ -0.13
NPHP3-203ENST00000465756 FCHSD2O94868 740 aa14.26□□□□□ -0.13
NPHP3-203ENST00000465756 TXNRD1Q16881 649 aa14.25□□□□□ -0.13
NPHP3-203ENST00000465756 EZH2Q15910 746 aaKnown RBP14.25□□□□□ -0.13
NPHP3-203ENST00000465756 PHKG2P15735 406 aa14.24□□□□□ -0.13
NPHP3-203ENST00000465756 NKX1-1Q15270 411 aaPredicted RBP14.24□□□□□ -0.13
NPHP3-203ENST00000465756 MPRIPQ6WCQ1 1025 aa14.24□□□□□ -0.13
NPHP3-203ENST00000465756 TTC5Q8N0Z6 440 aa14.24□□□□□ -0.13
NPHP3-203ENST00000465756 CAMKK2Q96RR4 588 aa14.24□□□□□ -0.13
NPHP3-203ENST00000465756 PPP1R1BQ9UD71 204 aaPredicted RBP14.24□□□□□ -0.13
NPHP3-203ENST00000465756 CCNL1Q9UK58 526 aaPredicted RBP14.24□□□□□ -0.13
NPHP3-203ENST00000465756 MEGF6O75095 1541 aa14.24□□□□□ -0.13
NPHP3-203ENST00000465756 NCAPD2Q15021 1401 aa14.23□□□□□ -0.13
NPHP3-203ENST00000465756 HMOX1P09601 288 aa14.22□□□□□ -0.13
NPHP3-203ENST00000465756 AK7Q96M32 723 aa14.22□□□□□ -0.13
NPHP3-203ENST00000465756 POLD1P28340 1107 aa14.22□□□□□ -0.13
NPHP3-203ENST00000465756 CHMP4AQ9BY43 222 aa14.22□□□□□ -0.13
NPHP3-203ENST00000465756 PNISRQ8TF01 805 aaKnown RBP14.21□□□□□ -0.13
NPHP3-203ENST00000465756 KDRP35968 1356 aa14.21□□□□□ -0.13
NPHP3-203ENST00000465756 HTATSF1O43719 755 aaKnown RBP14.21□□□□□ -0.13
NPHP3-203ENST00000465756 SLC16A10Q8TF71 515 aa14.21□□□□□ -0.13
NPHP3-203ENST00000465756 GNAT3A8MTJ3 354 aa14.21□□□□□ -0.14
NPHP3-203ENST00000465756 MSH5O43196 834 aa14.21□□□□□ -0.14
NPHP3-203ENST00000465756 CALD1Q05682 793 aaKnown RBP14.2□□□□□ -0.14
NPHP3-203ENST00000465756 SPON1Q9HCB6 807 aa14.2□□□□□ -0.14
NPHP3-203ENST00000465756 PEAK1Q9H792 1746 aa14.2□□□□□ -0.14
NPHP3-203ENST00000465756 TEX13AQ9BXU3 409 aaPredicted RBP14.2□□□□□ -0.14
NPHP3-203ENST00000465756 PRKAR2BP31323 418 aa14.19□□□□□ -0.14
NPHP3-203ENST00000465756 NHSQ6T4R5 1651 aa14.19□□□□□ -0.14
NPHP3-203ENST00000465756 CYP27B1O15528 508 aa14.19□□□□□ -0.14
NPHP3-203ENST00000465756 TFCP2L1Q9NZI6 479 aa14.19□□□□□ -0.14
NPHP3-203ENST00000465756 R3HDM1Q15032 1099 aaKnown RBP14.18□□□□□ -0.14
NPHP3-203ENST00000465756 PALLDQ8WX93 1383 aa14.18□□□□□ -0.14
NPHP3-203ENST00000465756 RBM42Q9BTD8 480 aaKnown RBP14.18□□□□□ -0.14
NPHP3-203ENST00000465756 RGPD3A6NKT7 1758 aaPredicted RBP14.18□□□□□ -0.14
NPHP3-203ENST00000465756 RGPD4Q7Z3J3 1758 aa14.18□□□□□ -0.14
NPHP3-203ENST00000465756 MAP3K5Q99683 1374 aa14.18□□□□□ -0.14
NPHP3-203ENST00000465756 SLC15A2Q16348 729 aa14.17□□□□□ -0.14
NPHP3-203ENST00000465756 KCNQ2O43526 872 aa14.16□□□□□ -0.14
NPHP3-203ENST00000465756 AEBP1Q8IUX7 1158 aa14.16□□□□□ -0.14
NPHP3-203ENST00000465756 YTHDC1Q96MU7 727 aaKnown RBP14.15□□□□□ -0.14
NPHP3-203ENST00000465756 RNMTO43148 476 aaKnown RBP14.15□□□□□ -0.14
NPHP3-203ENST00000465756 ATP6V1AP38606 617 aa14.15□□□□□ -0.14
NPHP3-203ENST00000465756 PKD1L3Q7Z443 1732 aa14.15□□□□□ -0.14
NPHP3-203ENST00000465756 TNS1Q9HBL0 1735 aaKnown RBP14.14□□□□□ -0.15
NPHP3-203ENST00000465756 PSDA5PKW4 1024 aaPredicted RBP14.14□□□□□ -0.15
NPHP3-203ENST00000465756 STARD3NLO95772 234 aa14.14□□□□□ -0.15
NPHP3-203ENST00000465756 A0A087WZG4 1122 aa14.14□□□□□ -0.15
NPHP3-203ENST00000465756 LOC102724428A0A0B4J2F2 783 aa14.14□□□□□ -0.15
NPHP3-203ENST00000465756 SIK1P57059 783 aa14.14□□□□□ -0.15
NPHP3-203ENST00000465756 PRKRIP1Q9H875 184 aaPredicted RBP14.14□□□□□ -0.15
NPHP3-203ENST00000465756 SLC52A2Q9HAB3 445 aa14.13□□□□□ -0.15
NPHP3-203ENST00000465756 ADRA2BP18089 450 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms