RNA–Protein interactions for RNA: ENST00000465556.1

TMCO3-205, Transcript of transmembrane and coiled-coil domains 3, humanhuman

TSL 3

Gene TMCO3, Length 314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO3-205ENST00000465556 USHBP1Q8N6Y0 703 aa16.51■□□□□ 0.23
TMCO3-205ENST00000465556 LY75O60449 1722 aa16.5■□□□□ 0.23
TMCO3-205ENST00000465556 PAPPAQ13219 1627 aa16.5■□□□□ 0.23
TMCO3-205ENST00000465556 PPM1GO15355 546 aaPredicted RBP16.5■□□□□ 0.23
TMCO3-205ENST00000465556 WASHC2AQ641Q2 1341 aa16.49■□□□□ 0.23
TMCO3-205ENST00000465556 CASZ1Q86V15 1759 aa16.49■□□□□ 0.23
TMCO3-205ENST00000465556 TNNT2P45379 298 aaPredicted RBP16.49■□□□□ 0.23
TMCO3-205ENST00000465556 POLKQ9UBT6 870 aa16.49■□□□□ 0.23
TMCO3-205ENST00000465556 PLSCR1O15162 318 aa16.48■□□□□ 0.23
TMCO3-205ENST00000465556 ACSBG1Q96GR2 724 aa16.48■□□□□ 0.23
TMCO3-205ENST00000465556 KNSTRNQ9Y448 316 aa16.48■□□□□ 0.23
TMCO3-205ENST00000465556 KCNQ2O43526 872 aa16.47■□□□□ 0.23
TMCO3-205ENST00000465556 R3HDM1Q15032 1099 aaKnown RBP16.47■□□□□ 0.23
TMCO3-205ENST00000465556 RAPGEF4Q8WZA2 1011 aa16.47■□□□□ 0.23
TMCO3-205ENST00000465556 ZCRB1Q8TBF4 217 aaKnown RBP16.46■□□□□ 0.23
TMCO3-205ENST00000465556 DDX54Q8TDD1 881 aaKnown RBP16.46■□□□□ 0.23
TMCO3-205ENST00000465556 TUBGCP6Q96RT7 1819 aa16.46■□□□□ 0.23
TMCO3-205ENST00000465556 QSER1Q2KHR3 1735 aa16.45■□□□□ 0.22
TMCO3-205ENST00000465556 TATP17735 454 aaPredicted RBP16.45■□□□□ 0.22
TMCO3-205ENST00000465556 AMER1Q5JTC6 1135 aaPredicted RBP16.45■□□□□ 0.22
TMCO3-205ENST00000465556 MORC1Q86VD1 984 aa16.45■□□□□ 0.22
TMCO3-205ENST00000465556 PCDH11XQ9BZA7 1347 aa16.44■□□□□ 0.22
TMCO3-205ENST00000465556 PCDH11YQ9BZA8 1340 aa16.44■□□□□ 0.22
TMCO3-205ENST00000465556 VIRMAQ69YN4 1812 aaKnown RBP16.43■□□□□ 0.22
TMCO3-205ENST00000465556 EIF4A2Q14240 407 aaKnown RBP16.43■□□□□ 0.22
TMCO3-205ENST00000465556 NBPF14Q5TI25 921 aa16.43■□□□□ 0.22
TMCO3-205ENST00000465556 ANO8Q9HCE9 1232 aaPredicted RBP16.43■□□□□ 0.22
TMCO3-205ENST00000465556 TAF1LQ8IZX4 1826 aa16.42■□□□□ 0.22
TMCO3-205ENST00000465556 EYA1Q99502 592 aa16.42■□□□□ 0.22
TMCO3-205ENST00000465556 PLEKHG2Q9H7P9 1386 aa16.41■□□□□ 0.22
TMCO3-205ENST00000465556 C5P01031 1676 aa16.41■□□□□ 0.22
TMCO3-205ENST00000465556 TXNRD1Q16881 649 aa16.41■□□□□ 0.22
TMCO3-205ENST00000465556 PROM2Q8N271 834 aa16.41■□□□□ 0.22
TMCO3-205ENST00000465556 IGSF1Q8N6C5 1336 aa16.41■□□□□ 0.22
TMCO3-205ENST00000465556 PER1O15534 1290 aaPredicted RBP16.4■□□□□ 0.22
TMCO3-205ENST00000465556 NPC1L1Q9UHC9 1359 aa16.39■□□□□ 0.21
TMCO3-205ENST00000465556 CYP27B1O15528 508 aa16.38■□□□□ 0.21
TMCO3-205ENST00000465556 SYTL4Q96C24 671 aaPredicted RBP16.38■□□□□ 0.21
TMCO3-205ENST00000465556 PRIM1P49642 420 aaKnown RBP16.37■□□□□ 0.21
TMCO3-205ENST00000465556 SCN11AQ9UI33 1791 aa16.36■□□□□ 0.21
TMCO3-205ENST00000465556 CC2D1BQ5T0F9 858 aaKnown RBP16.36■□□□□ 0.21
TMCO3-205ENST00000465556 COL3A1P02461 1466 aaPredicted RBP16.35■□□□□ 0.21
TMCO3-205ENST00000465556 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.35■□□□□ 0.21
TMCO3-205ENST00000465556 SPG7Q9UQ90 795 aa16.35■□□□□ 0.21
TMCO3-205ENST00000465556 STK32BQ9NY57 414 aa16.34■□□□□ 0.21
TMCO3-205ENST00000465556 KDRP35968 1356 aa16.34■□□□□ 0.21
TMCO3-205ENST00000465556 LRRC4BQ9NT99 713 aa16.33■□□□□ 0.2
TMCO3-205ENST00000465556 COL24A1Q17RW2 1714 aa16.33■□□□□ 0.2
TMCO3-205ENST00000465556 SLC15A2Q16348 729 aa16.32■□□□□ 0.2
TMCO3-205ENST00000465556 SLC27A3Q5K4L6 730 aa16.32■□□□□ 0.2
TMCO3-205ENST00000465556 AEBP1Q8IUX7 1158 aa16.32■□□□□ 0.2
TMCO3-205ENST00000465556 IL13P35225 146 aa16.31■□□□□ 0.2
TMCO3-205ENST00000465556 MTHFSP49914 203 aa16.31■□□□□ 0.2
TMCO3-205ENST00000465556 NKX1-1Q15270 411 aaPredicted RBP16.31■□□□□ 0.2
TMCO3-205ENST00000465556 UBR3Q6ZT12 1888 aa16.31■□□□□ 0.2
TMCO3-205ENST00000465556 C4BP0C0L5 1744 aa16.31■□□□□ 0.2
TMCO3-205ENST00000465556 PALLDQ8WX93 1383 aa16.3■□□□□ 0.2
TMCO3-205ENST00000465556 PHKG2P15735 406 aa16.3■□□□□ 0.2
TMCO3-205ENST00000465556 CNGB1Q14028 1251 aaPredicted RBP16.29■□□□□ 0.2
TMCO3-205ENST00000465556 ZNF827Q17R98 1081 aa16.29■□□□□ 0.2
TMCO3-205ENST00000465556 IFNL2Q8IZJ0 200 aa16.29■□□□□ 0.2
TMCO3-205ENST00000465556 PDGFDQ9GZP0 370 aaPredicted RBP16.29■□□□□ 0.2
TMCO3-205ENST00000465556 ZNF831Q5JPB2 1677 aa16.29■□□□□ 0.2
TMCO3-205ENST00000465556 KDM6AO15550 1401 aaPredicted RBP16.28■□□□□ 0.2
TMCO3-205ENST00000465556 COL5A3P25940 1745 aaPredicted RBP16.28■□□□□ 0.2
TMCO3-205ENST00000465556 ADAMTS7Q9UKP4 1686 aa16.28■□□□□ 0.2
TMCO3-205ENST00000465556 SULT6B1Q6IMI4 303 aa16.28■□□□□ 0.2
TMCO3-205ENST00000465556 MPRIPQ6WCQ1 1025 aa16.28■□□□□ 0.2
TMCO3-205ENST00000465556 SPON1Q9HCB6 807 aa16.28■□□□□ 0.2
TMCO3-205ENST00000465556 KCNQ4P56696 695 aa16.27■□□□□ 0.2
TMCO3-205ENST00000465556 CCNL1Q9UK58 526 aaPredicted RBP16.27■□□□□ 0.2
TMCO3-205ENST00000465556 AMOTQ4VCS5 1084 aa16.26■□□□□ 0.19
TMCO3-205ENST00000465556 PLEKHO1Q53GL0 409 aaPredicted RBP16.26■□□□□ 0.19
TMCO3-205ENST00000465556 ZNF530Q6P9A1 599 aaPredicted RBP16.26■□□□□ 0.19
TMCO3-205ENST00000465556 AKT1S1Q96B36 256 aa16.26■□□□□ 0.19
TMCO3-205ENST00000465556 DIAPH1O60610 1272 aaKnown RBP16.25■□□□□ 0.19
TMCO3-205ENST00000465556 ZBTB7AO95365 584 aa16.25■□□□□ 0.19
TMCO3-205ENST00000465556 PIGBQ92521 554 aa16.25■□□□□ 0.19
TMCO3-205ENST00000465556 TMOD3Q9NYL9 352 aa16.25■□□□□ 0.19
TMCO3-205ENST00000465556 CICQ96RK0 1608 aaPredicted RBP16.25■□□□□ 0.19
TMCO3-205ENST00000465556 HSP90AB1P08238 724 aaKnown RBP16.24■□□□□ 0.19
TMCO3-205ENST00000465556 SMARCC1Q92922 1105 aaPredicted RBP16.24■□□□□ 0.19
TMCO3-205ENST00000465556 MRC1P22897 1456 aa16.23■□□□□ 0.19
TMCO3-205ENST00000465556 SIPA1L3O60292 1781 aaPredicted RBP16.23■□□□□ 0.19
TMCO3-205ENST00000465556 TJP1Q07157 1748 aa16.22■□□□□ 0.19
TMCO3-205ENST00000465556 PNPLA7Q6ZV29 1317 aa16.22■□□□□ 0.19
TMCO3-205ENST00000465556 HMOX1P09601 288 aa16.22■□□□□ 0.19
TMCO3-205ENST00000465556 DCAF5Q96JK2 942 aa16.22■□□□□ 0.19
TMCO3-205ENST00000465556 MTFR1LQ9H019 292 aa16.22■□□□□ 0.19
TMCO3-205ENST00000465556 C1orf141Q5JVX7 400 aa16.21■□□□□ 0.19
TMCO3-205ENST00000465556 PPP1R1BQ9UD71 204 aaPredicted RBP16.21■□□□□ 0.19
TMCO3-205ENST00000465556 UBR2Q8IWV8 1755 aa16.21■□□□□ 0.18
TMCO3-205ENST00000465556 MYH14Q7Z406 1995 aaKnown RBP16.2■□□□□ 0.18
TMCO3-205ENST00000465556 ERVV-2B6SEH9 535 aa16.2■□□□□ 0.18
TMCO3-205ENST00000465556 PTGER2P43116 358 aa16.2■□□□□ 0.18
TMCO3-205ENST00000465556 TFCP2L1Q9NZI6 479 aa16.2■□□□□ 0.18
TMCO3-205ENST00000465556 C4AP0C0L4 1744 aa16.19■□□□□ 0.18
TMCO3-205ENST00000465556 ASAP1Q9ULH1 1129 aa16.19■□□□□ 0.18
TMCO3-205ENST00000465556 ATF5Q9Y2D1 282 aaPredicted RBP16.19■□□□□ 0.18
TMCO3-205ENST00000465556 DLG5Q8TDM6 1919 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms