RNA–Protein interactions for RNA: ENST00000465507.1

XRN1-205, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 322 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-205ENST00000465507 SUPT5HO00267 1087 aaKnown RBP7.05□□□□□ -1.28
XRN1-205ENST00000465507 BMP2P12643 396 aa7.05□□□□□ -1.28
XRN1-205ENST00000465507 LORP23490 312 aaPredicted RBP7.05□□□□□ -1.28
XRN1-205ENST00000465507 LINC00528Q8N1L1 170 aa7.05□□□□□ -1.28
XRN1-205ENST00000465507 FNBP4Q8N3X1 1017 aaPredicted RBP7.05□□□□□ -1.28
XRN1-205ENST00000465507 ZNF592Q92610 1267 aa7.05□□□□□ -1.28
XRN1-205ENST00000465507 ZNF395Q9H8N7 513 aaPredicted RBP7.05□□□□□ -1.28
XRN1-205ENST00000465507 ESPNB1AK53 854 aa7.04□□□□□ -1.28
XRN1-205ENST00000465507 UPP2O95045 317 aa7.04□□□□□ -1.28
XRN1-205ENST00000465507 MCCD1P59942 119 aaPredicted RBP7.04□□□□□ -1.28
XRN1-205ENST00000465507 MAN1A2O60476 641 aa7.03□□□□□ -1.28
XRN1-205ENST00000465507 RFX1P22670 979 aa7.03□□□□□ -1.28
XRN1-205ENST00000465507 SCTRP47872 440 aa7.03□□□□□ -1.28
XRN1-205ENST00000465507 PLPP7Q8NBV4 271 aa7.03□□□□□ -1.28
XRN1-205ENST00000465507 ALG2Q9H553 416 aa7.03□□□□□ -1.28
XRN1-205ENST00000465507 RAB6BQ9NRW1 208 aa7.03□□□□□ -1.28
XRN1-205ENST00000465507 MYCP01106 439 aaPredicted RBP7.02□□□□□ -1.29
XRN1-205ENST00000465507 ADD1P35611 737 aaKnown RBP7.02□□□□□ -1.29
XRN1-205ENST00000465507 SOX11P35716 441 aa7.02□□□□□ -1.29
XRN1-205ENST00000465507 ZSCAN1Q8NBB4 408 aa7.02□□□□□ -1.29
XRN1-205ENST00000465507 ARID3AQ99856 593 aa7.02□□□□□ -1.29
XRN1-205ENST00000465507 LOC100996750A0A140TA64 210 aa7.01□□□□□ -1.29
XRN1-205ENST00000465507 MEN1O00255 615 aa7.01□□□□□ -1.29
XRN1-205ENST00000465507 STAU1O95793 577 aaKnown RBP7.01□□□□□ -1.29
XRN1-205ENST00000465507 CC2D2BQ6DHV5 1058 aa7.01□□□□□ -1.29
XRN1-205ENST00000465507 TBC1D9Q6ZT07 1266 aa7.01□□□□□ -1.29
XRN1-205ENST00000465507 SEPT12Q8IYM1 358 aa7.01□□□□□ -1.29
XRN1-205ENST00000465507 KRTAP4-6Q9BYQ5 205 aa7.01□□□□□ -1.29
XRN1-205ENST00000465507 POLMQ9NP87 494 aaPredicted RBP7.01□□□□□ -1.29
XRN1-205ENST00000465507 DNMT3LQ9UJW3 386 aa7.01□□□□□ -1.29
XRN1-205ENST00000465507 FIGNL2A6NMB9 653 aa7□□□□□ -1.29
XRN1-205ENST00000465507 VSIG8P0DPA2 414 aa7□□□□□ -1.29
XRN1-205ENST00000465507 PSME1Q06323 249 aa7□□□□□ -1.29
XRN1-205ENST00000465507 CDCA8Q53HL2 280 aa7□□□□□ -1.29
XRN1-205ENST00000465507 TFIP11Q9UBB9 837 aaKnown RBP7□□□□□ -1.29
XRN1-205ENST00000465507 SOS2Q07890 1332 aaPredicted RBP7□□□□□ -1.29
XRN1-205ENST00000465507 ATP5J2-PTCD1G3V325 749 aa6.99□□□□□ -1.29
XRN1-205ENST00000465507 LILRA1O75019 489 aa6.99□□□□□ -1.29
XRN1-205ENST00000465507 NCOA4Q13772 614 aa6.99□□□□□ -1.29
XRN1-205ENST00000465507 EML3Q32P44 896 aa6.99□□□□□ -1.29
XRN1-205ENST00000465507 UCN2Q96RP3 112 aa6.99□□□□□ -1.29
XRN1-205ENST00000465507 USP17L5A8MUK1 530 aa6.98□□□□□ -1.29
XRN1-205ENST00000465507 PPFIA3O75145 1194 aa6.98□□□□□ -1.29
XRN1-205ENST00000465507 ADH1AP07327 375 aa6.98□□□□□ -1.29
XRN1-205ENST00000465507 LMOD1P29536 600 aaPredicted RBP6.98□□□□□ -1.29
XRN1-205ENST00000465507 PHTF2Q8N3S3 785 aa6.98□□□□□ -1.29
XRN1-205ENST00000465507 INSM2Q96T92 566 aaPredicted RBP6.98□□□□□ -1.29
XRN1-205ENST00000465507 TSEN34Q9BSV6 310 aaKnown RBP6.98□□□□□ -1.29
XRN1-205ENST00000465507 ARHGEF10LQ9HCE6 1279 aa6.98□□□□□ -1.29
XRN1-205ENST00000465507 FAM181BA6NEQ2 426 aa6.97□□□□□ -1.29
XRN1-205ENST00000465507 CCDC97Q96F63 343 aaPredicted RBP6.97□□□□□ -1.29
XRN1-205ENST00000465507 OSBPL3Q9H4L5 887 aa6.97□□□□□ -1.29
XRN1-205ENST00000465507 USP17L3A6NCW0 530 aa6.96□□□□□ -1.3
XRN1-205ENST00000465507 USP17L4A6NCW7 530 aa6.96□□□□□ -1.3
XRN1-205ENST00000465507 PALM3A6NDB9 673 aaPredicted RBP6.96□□□□□ -1.3
XRN1-205ENST00000465507 ATP9BO43861 1147 aa6.96□□□□□ -1.3
XRN1-205ENST00000465507 ERVK-9P63128 1117 aa6.96□□□□□ -1.3
XRN1-205ENST00000465507 USP4Q13107 963 aa6.96□□□□□ -1.3
XRN1-205ENST00000465507 USP17L2Q6R6M4 530 aa6.96□□□□□ -1.3
XRN1-205ENST00000465507 USP17L1Q7RTZ2 530 aa6.96□□□□□ -1.3
XRN1-205ENST00000465507 CYP2U1Q7Z449 544 aa6.96□□□□□ -1.3
XRN1-205ENST00000465507 TTLL8A6PVC2 850 aa6.95□□□□□ -1.3
XRN1-205ENST00000465507 PTGIRP43119 386 aa6.95□□□□□ -1.3
XRN1-205ENST00000465507 CTSOP43234 321 aaPredicted RBP6.95□□□□□ -1.3
XRN1-205ENST00000465507 MAP7D1Q3KQU3 841 aa6.95□□□□□ -1.3
XRN1-205ENST00000465507 Q6ZVU0 165 aa6.95□□□□□ -1.3
XRN1-205ENST00000465507 NLRP3Q96P20 1036 aa6.95□□□□□ -1.3
XRN1-205ENST00000465507 SERTAD1Q9UHV2 236 aa6.95□□□□□ -1.3
XRN1-205ENST00000465507 NOD1Q9Y239 953 aa6.95□□□□□ -1.3
XRN1-205ENST00000465507 A0A1W2PRU2 124 aa6.94□□□□□ -1.3
XRN1-205ENST00000465507 GTF2IP78347 998 aa6.94□□□□□ -1.3
XRN1-205ENST00000465507 CCDC82Q8N4S0 544 aa6.94□□□□□ -1.3
XRN1-205ENST00000465507 TRIM52Q96A61 297 aa6.94□□□□□ -1.3
XRN1-205ENST00000465507 SIRT1Q96EB6 747 aa6.94□□□□□ -1.3
XRN1-205ENST00000465507 ZNF594Q96JF6 807 aaPredicted RBP6.94□□□□□ -1.3
XRN1-205ENST00000465507 PPP1R12CQ9BZL4 782 aa6.94□□□□□ -1.3
XRN1-205ENST00000465507 MKRN1Q9UHC7 482 aaKnown RBP6.94□□□□□ -1.3
XRN1-205ENST00000465507 SPINT1O43278 529 aa6.93□□□□□ -1.3
XRN1-205ENST00000465507 LGR5O75473 907 aa6.93□□□□□ -1.3
XRN1-205ENST00000465507 PTSQ03393 145 aa6.93□□□□□ -1.3
XRN1-205ENST00000465507 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.93□□□□□ -1.3
XRN1-205ENST00000465507 SLC27A3Q5K4L6 730 aa6.93□□□□□ -1.3
XRN1-205ENST00000465507 PRICKLE2Q7Z3G6 844 aa6.93□□□□□ -1.3
XRN1-205ENST00000465507 RHOQP17081 205 aa6.92□□□□□ -1.3
XRN1-205ENST00000465507 C1orf115Q9H7X2 142 aa6.92□□□□□ -1.3
XRN1-205ENST00000465507 MAFBQ9Y5Q3 323 aaPredicted RBP6.92□□□□□ -1.3
XRN1-205ENST00000465507 RASA1P20936 1047 aa6.91□□□□□ -1.3
XRN1-205ENST00000465507 GDF10P55107 478 aa6.91□□□□□ -1.3
XRN1-205ENST00000465507 KRT76Q01546 638 aa6.91□□□□□ -1.3
XRN1-205ENST00000465507 CCDC125Q86Z20 511 aa6.91□□□□□ -1.3
XRN1-205ENST00000465507 GPR161Q8N6U8 529 aaKnown RBP6.91□□□□□ -1.3
XRN1-205ENST00000465507 KDF1Q8NAX2 398 aaPredicted RBP6.91□□□□□ -1.3
XRN1-205ENST00000465507 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.91□□□□□ -1.3
XRN1-205ENST00000465507 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.9□□□□□ -1.3
XRN1-205ENST00000465507 PHKA2P46019 1235 aa6.9□□□□□ -1.3
XRN1-205ENST00000465507 OGFOD1Q8N543 542 aa6.9□□□□□ -1.3
XRN1-205ENST00000465507 TPCN2Q8NHX9 752 aa6.9□□□□□ -1.3
XRN1-205ENST00000465507 CNKSR1Q969H4 720 aa6.9□□□□□ -1.3
XRN1-205ENST00000465507 ETNK1Q9HBU6 452 aa6.9□□□□□ -1.3
XRN1-205ENST00000465507 RBM19Q9Y4C8 960 aaKnown RBP6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms