RNA–Protein interactions for RNA: ENST00000465408.1

UBE4B-205, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 355 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-205ENST00000465408 CHRNA2Q15822 529 aa10.98□□□□□ -0.65
UBE4B-205ENST00000465408 PHF8Q9UPP1 1060 aa10.98□□□□□ -0.65
UBE4B-205ENST00000465408 PARP4Q9UKK3 1724 aaKnown RBP10.98□□□□□ -0.65
UBE4B-205ENST00000465408 CRYBG1Q9Y4K1 1723 aa10.98□□□□□ -0.65
UBE4B-205ENST00000465408 SIRT1Q96EB6 747 aa10.97□□□□□ -0.65
UBE4B-205ENST00000465408 PAPPAQ13219 1627 aa10.97□□□□□ -0.65
UBE4B-205ENST00000465408 RGPD8O14715 1765 aaPredicted RBP10.96□□□□□ -0.65
UBE4B-205ENST00000465408 ATP7BP35670 1465 aa10.96□□□□□ -0.65
UBE4B-205ENST00000465408 SSH2Q76I76 1423 aa10.96□□□□□ -0.65
UBE4B-205ENST00000465408 MTHFSP49914 203 aa10.96□□□□□ -0.65
UBE4B-205ENST00000465408 TCP11L2Q8N4U5 519 aa10.96□□□□□ -0.65
UBE4B-205ENST00000465408 ALS2Q96Q42 1657 aa10.95□□□□□ -0.66
UBE4B-205ENST00000465408 PPIP5K1Q6PFW1 1433 aa10.95□□□□□ -0.66
UBE4B-205ENST00000465408 KIAA0232Q92628 1395 aa10.95□□□□□ -0.66
UBE4B-205ENST00000465408 ZNF827Q17R98 1081 aa10.95□□□□□ -0.66
UBE4B-205ENST00000465408 RBM46Q8TBY0 533 aaKnown RBP10.95□□□□□ -0.66
UBE4B-205ENST00000465408 NUDT16Q96DE0 195 aaKnown RBP10.95□□□□□ -0.66
UBE4B-205ENST00000465408 CFAP53Q96M91 514 aa10.95□□□□□ -0.66
UBE4B-205ENST00000465408 NMRK2Q9NPI5 230 aa10.95□□□□□ -0.66
UBE4B-205ENST00000465408 TRPM3Q9HCF6 1732 aaPredicted RBP10.95□□□□□ -0.66
UBE4B-205ENST00000465408 RNF123Q5XPI4 1314 aa10.94□□□□□ -0.66
UBE4B-205ENST00000465408 FYB1O15117 783 aa10.94□□□□□ -0.66
UBE4B-205ENST00000465408 LARP1Q6PKG0 1096 aaKnown RBP10.94□□□□□ -0.66
UBE4B-205ENST00000465408 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.94□□□□□ -0.66
UBE4B-205ENST00000465408 USP19O94966 1318 aa10.93□□□□□ -0.66
UBE4B-205ENST00000465408 PRR36Q9H6K5 1346 aa10.93□□□□□ -0.66
UBE4B-205ENST00000465408 APAF1O14727 1248 aa10.93□□□□□ -0.66
UBE4B-205ENST00000465408 PHRF1Q9P1Y6 1649 aaKnown RBP10.93□□□□□ -0.66
UBE4B-205ENST00000465408 TNRC18O15417 2968 aaPredicted RBP10.92□□□□□ -0.66
UBE4B-205ENST00000465408 ERICH6BQ5W0A0 696 aa10.92□□□□□ -0.66
UBE4B-205ENST00000465408 PMFBP1Q8TBY8 1022 aa10.92□□□□□ -0.66
UBE4B-205ENST00000465408 PPP4R2Q9NY27 417 aa10.92□□□□□ -0.66
UBE4B-205ENST00000465408 RCAN3Q9UKA8 241 aa10.92□□□□□ -0.66
UBE4B-205ENST00000465408 LRRC37A3O60309 1634 aa10.91□□□□□ -0.66
UBE4B-205ENST00000465408 ZNF521Q96K83 1311 aa10.91□□□□□ -0.66
UBE4B-205ENST00000465408 RGS19P49795 217 aa10.91□□□□□ -0.66
UBE4B-205ENST00000465408 RRP1P56182 461 aaKnown RBP10.91□□□□□ -0.66
UBE4B-205ENST00000465408 FSTL1Q12841 308 aa10.91□□□□□ -0.66
UBE4B-205ENST00000465408 SLC16A10Q8TF71 515 aa10.91□□□□□ -0.66
UBE4B-205ENST00000465408 ABHD8Q96I13 439 aa10.91□□□□□ -0.66
UBE4B-205ENST00000465408 CPSF1Q10570 1443 aaKnown RBP10.91□□□□□ -0.66
UBE4B-205ENST00000465408 EVA1CP58658 441 aa10.9□□□□□ -0.66
UBE4B-205ENST00000465408 NME9Q86XW9 330 aa10.9□□□□□ -0.66
UBE4B-205ENST00000465408 CCDC61Q9Y6R9 512 aa10.9□□□□□ -0.66
UBE4B-205ENST00000465408 KIF20BQ96Q89 1820 aa10.9□□□□□ -0.66
UBE4B-205ENST00000465408 EDC4Q6P2E9 1401 aaKnown RBP10.9□□□□□ -0.66
UBE4B-205ENST00000465408 ANKRD26Q9UPS8 1709 aa10.89□□□□□ -0.67
UBE4B-205ENST00000465408 COL3A1P02461 1466 aaPredicted RBP10.89□□□□□ -0.67
UBE4B-205ENST00000465408 FOXN1O15353 648 aa10.89□□□□□ -0.67
UBE4B-205ENST00000465408 GOLGA2Q08379 1002 aa10.89□□□□□ -0.67
UBE4B-205ENST00000465408 B4GALNT3Q6L9W6 998 aa10.89□□□□□ -0.67
UBE4B-205ENST00000465408 RUNDC1Q96C34 613 aa10.89□□□□□ -0.67
UBE4B-205ENST00000465408 THRAP3Q9Y2W1 955 aaKnown RBP10.89□□□□□ -0.67
UBE4B-205ENST00000465408 RRP7AQ9Y3A4 280 aaKnown RBP10.89□□□□□ -0.67
UBE4B-205ENST00000465408 U2SURPO15042 1029 aaKnown RBP10.88□□□□□ -0.67
UBE4B-205ENST00000465408 U2AF1L5P0DN76 240 aaPredicted RBP10.88□□□□□ -0.67
UBE4B-205ENST00000465408 FBLN1P23142 703 aa10.88□□□□□ -0.67
UBE4B-205ENST00000465408 U2AF1Q01081 240 aaKnown RBP eCLIP10.88□□□□□ -0.67
UBE4B-205ENST00000465408 SLFN5Q08AF3 891 aa10.88□□□□□ -0.67
UBE4B-205ENST00000465408 DUSP27Q5VZP5 1158 aa10.88□□□□□ -0.67
UBE4B-205ENST00000465408 MARCH10Q8NA82 808 aaPredicted RBP10.88□□□□□ -0.67
UBE4B-205ENST00000465408 PRDM10Q9NQV6 1147 aa10.88□□□□□ -0.67
UBE4B-205ENST00000465408 PNPLA7Q6ZV29 1317 aa10.87□□□□□ -0.67
UBE4B-205ENST00000465408 ZC3H6P61129 1189 aaKnown RBP10.87□□□□□ -0.67
UBE4B-205ENST00000465408 SPINK5Q9NQ38 1064 aaPredicted RBP10.87□□□□□ -0.67
UBE4B-205ENST00000465408 BCL9O00512 1426 aa10.86□□□□□ -0.67
UBE4B-205ENST00000465408 NEUROD2Q15784 382 aa10.86□□□□□ -0.67
UBE4B-205ENST00000465408 C16orf71Q8IYS4 520 aaPredicted RBP10.86□□□□□ -0.67
UBE4B-205ENST00000465408 PDE4DIPQ5VU43 2346 aa10.86□□□□□ -0.67
UBE4B-205ENST00000465408 QSER1Q2KHR3 1735 aa10.86□□□□□ -0.67
UBE4B-205ENST00000465408 MON2Q7Z3U7 1717 aa10.85□□□□□ -0.67
UBE4B-205ENST00000465408 PPM1GO15355 546 aaPredicted RBP10.85□□□□□ -0.67
UBE4B-205ENST00000465408 DDB1Q16531 1140 aa10.85□□□□□ -0.67
UBE4B-205ENST00000465408 AKT1S1Q96B36 256 aa10.85□□□□□ -0.67
UBE4B-205ENST00000465408 TSHZ2Q9NRE2 1034 aa10.85□□□□□ -0.67
UBE4B-205ENST00000465408 ACEP12821 1306 aa10.84□□□□□ -0.67
UBE4B-205ENST00000465408 PLEKHG3A1L390 1219 aa10.84□□□□□ -0.67
UBE4B-205ENST00000465408 PLIN1O60240 522 aa10.84□□□□□ -0.67
UBE4B-205ENST00000465408 DIAPH1O60610 1272 aaKnown RBP10.84□□□□□ -0.67
UBE4B-205ENST00000465408 WWC1Q8IX03 1113 aa10.84□□□□□ -0.67
UBE4B-205ENST00000465408 TRMT2AQ8IZ69 625 aaKnown RBP10.84□□□□□ -0.67
UBE4B-205ENST00000465408 NGEFQ8N5V2 710 aa10.84□□□□□ -0.67
UBE4B-205ENST00000465408 EXOC6Q8TAG9 804 aa10.84□□□□□ -0.67
UBE4B-205ENST00000465408 COG3Q96JB2 828 aa10.84□□□□□ -0.67
UBE4B-205ENST00000465408 LRRC4BQ9NT99 713 aa10.84□□□□□ -0.67
UBE4B-205ENST00000465408 POLKQ9UBT6 870 aa10.84□□□□□ -0.67
UBE4B-205ENST00000465408 EMILIN1Q9Y6C2 1016 aa10.84□□□□□ -0.67
UBE4B-205ENST00000465408 ITSN1Q15811 1721 aa10.84□□□□□ -0.67
UBE4B-205ENST00000465408 TTC21BQ7Z4L5 1316 aa10.84□□□□□ -0.67
UBE4B-205ENST00000465408 AKAP12Q02952 1782 aa10.83□□□□□ -0.68
UBE4B-205ENST00000465408 LMO7Q8WWI1 1683 aa10.83□□□□□ -0.68
UBE4B-205ENST00000465408 CCDC85CA6NKD9 419 aa10.83□□□□□ -0.68
UBE4B-205ENST00000465408 E9PSI1 815 aa10.83□□□□□ -0.68
UBE4B-205ENST00000465408 ZNF692Q9BU19 519 aaPredicted RBP10.83□□□□□ -0.68
UBE4B-205ENST00000465408 TUBGCP6Q96RT7 1819 aa10.83□□□□□ -0.68
UBE4B-205ENST00000465408 CICQ96RK0 1608 aaPredicted RBP10.83□□□□□ -0.68
UBE4B-205ENST00000465408 CD2APQ9Y5K6 639 aa10.82□□□□□ -0.68
UBE4B-205ENST00000465408 USP6P35125 1406 aa10.82□□□□□ -0.68
UBE4B-205ENST00000465408 RRS1Q15050 365 aaKnown RBP10.81□□□□□ -0.68
UBE4B-205ENST00000465408 PLEKHF1Q96S99 279 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms