RNA–Protein interactions for RNA: ENST00000465057.5

CMTM1-207, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 797 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-207ENST00000465057 KIF15Q9NS87 1388 aa8.48□□□□□ -1.05
CMTM1-207ENST00000465057 NPHP4O75161 1426 aaPredicted RBP8.48□□□□□ -1.05
CMTM1-207ENST00000465057 FGD6Q6ZV73 1430 aa8.48□□□□□ -1.05
CMTM1-207ENST00000465057 ERBINQ96RT1 1412 aa8.48□□□□□ -1.05
CMTM1-207ENST00000465057 XIRP1Q702N8 1843 aaKnown RBP8.48□□□□□ -1.05
CMTM1-207ENST00000465057 PPEF1O14829 653 aaPredicted RBP8.48□□□□□ -1.05
CMTM1-207ENST00000465057 GIGYF2Q6Y7W6 1299 aaKnown RBP8.48□□□□□ -1.05
CMTM1-207ENST00000465057 ILDR2Q71H61 639 aa8.48□□□□□ -1.05
CMTM1-207ENST00000465057 IRX2Q9BZI1 471 aaPredicted RBP8.48□□□□□ -1.05
CMTM1-207ENST00000465057 SLC24A3Q9HC58 644 aa8.48□□□□□ -1.05
CMTM1-207ENST00000465057 MED14O60244 1454 aa8.48□□□□□ -1.05
CMTM1-207ENST00000465057 MYO5BQ9ULV0 1848 aa8.47□□□□□ -1.05
CMTM1-207ENST00000465057 ALKQ9UM73 1620 aa8.47□□□□□ -1.05
CMTM1-207ENST00000465057 HOXA2O43364 376 aa8.47□□□□□ -1.05
CMTM1-207ENST00000465057 NUTM1Q86Y26 1132 aa8.47□□□□□ -1.05
CMTM1-207ENST00000465057 FAM160A2Q8N612 972 aaPredicted RBP8.47□□□□□ -1.05
CMTM1-207ENST00000465057 SYNMO15061 1565 aa8.47□□□□□ -1.05
CMTM1-207ENST00000465057 Q3C1V9 767 aa8.46□□□□□ -1.06
CMTM1-207ENST00000465057 RNF19BQ6ZMZ0 732 aa8.46□□□□□ -1.06
CMTM1-207ENST00000465057 ANKLE2Q86XL3 938 aa8.46□□□□□ -1.06
CMTM1-207ENST00000465057 PARP9Q8IXQ6 854 aa8.46□□□□□ -1.06
CMTM1-207ENST00000465057 THEMISQ8N1K5 641 aaPredicted RBP8.46□□□□□ -1.06
CMTM1-207ENST00000465057 RRP7BPQ9NSQ0 103 aa8.46□□□□□ -1.06
CMTM1-207ENST00000465057 HLA-CQ95604 372 aa8.45□□□□□ -1.06
CMTM1-207ENST00000465057 CHIC2Q9UKJ5 165 aa8.45□□□□□ -1.06
CMTM1-207ENST00000465057 EFCAB6Q5THR3 1501 aa8.44□□□□□ -1.06
CMTM1-207ENST00000465057 KDM5AP29375 1690 aaKnown RBP8.44□□□□□ -1.06
CMTM1-207ENST00000465057 GCC2Q8IWJ2 1684 aa8.44□□□□□ -1.06
CMTM1-207ENST00000465057 SLC19A1P41440 591 aa8.44□□□□□ -1.06
CMTM1-207ENST00000465057 PIP4K2BP78356 416 aa8.44□□□□□ -1.06
CMTM1-207ENST00000465057 PDE4DQ08499 809 aa8.44□□□□□ -1.06
CMTM1-207ENST00000465057 TRIM26Q12899 539 aaPredicted RBP8.44□□□□□ -1.06
CMTM1-207ENST00000465057 MSS51Q4VC12 460 aa8.44□□□□□ -1.06
CMTM1-207ENST00000465057 PPARGC1BQ86YN6 1023 aaKnown RBP8.44□□□□□ -1.06
CMTM1-207ENST00000465057 EMID1Q96A84 441 aaPredicted RBP8.44□□□□□ -1.06
CMTM1-207ENST00000465057 ARHGAP31Q2M1Z3 1444 aa8.44□□□□□ -1.06
CMTM1-207ENST00000465057 SCAF11Q99590 1463 aaKnown RBP8.44□□□□□ -1.06
CMTM1-207ENST00000465057 SLIT1O75093 1534 aa8.44□□□□□ -1.06
CMTM1-207ENST00000465057 MED1Q15648 1581 aaPredicted RBP8.44□□□□□ -1.06
CMTM1-207ENST00000465057 SPIRE2Q8WWL2 714 aa8.43□□□□□ -1.06
CMTM1-207ENST00000465057 ARHGAP23Q9P227 1491 aa8.43□□□□□ -1.06
CMTM1-207ENST00000465057 LMTK2Q8IWU2 1503 aa8.43□□□□□ -1.06
CMTM1-207ENST00000465057 LRRC7Q96NW7 1537 aa8.43□□□□□ -1.06
CMTM1-207ENST00000465057 MS4A1P11836 297 aa8.42□□□□□ -1.06
CMTM1-207ENST00000465057 GUCA2AQ02747 115 aa8.42□□□□□ -1.06
CMTM1-207ENST00000465057 BEGAINQ9BUH8 593 aa8.42□□□□□ -1.06
CMTM1-207ENST00000465057 ANKRD30AQ9BXX3 1397 aa8.42□□□□□ -1.06
CMTM1-207ENST00000465057 ADGRL2O95490 1459 aa8.42□□□□□ -1.06
CMTM1-207ENST00000465057 TET3O43151 1660 aa8.41□□□□□ -1.06
CMTM1-207ENST00000465057 ADGRB3O60242 1522 aa8.41□□□□□ -1.06
CMTM1-207ENST00000465057 KANK1Q14678 1352 aa8.41□□□□□ -1.06
CMTM1-207ENST00000465057 HSPA1LP34931 641 aa8.41□□□□□ -1.06
CMTM1-207ENST00000465057 PLA2G2CQ5R387 149 aa8.41□□□□□ -1.06
CMTM1-207ENST00000465057 LIAT1Q6ZQX7 453 aa8.41□□□□□ -1.06
CMTM1-207ENST00000465057 USB1Q9BQ65 265 aaKnown RBP8.41□□□□□ -1.06
CMTM1-207ENST00000465057 PRDM9Q9NQV7 894 aa8.41□□□□□ -1.06
CMTM1-207ENST00000465057 UNC13BO14795 1591 aa8.4□□□□□ -1.06
CMTM1-207ENST00000465057 TOM1O60784 492 aa8.4□□□□□ -1.06
CMTM1-207ENST00000465057 CENPBP07199 599 aaPredicted RBP8.4□□□□□ -1.06
CMTM1-207ENST00000465057 LTKP29376 864 aa8.4□□□□□ -1.06
CMTM1-207ENST00000465057 FAM50AQ14320 339 aaKnown RBP8.4□□□□□ -1.06
CMTM1-207ENST00000465057 SPRYD7Q5W111 196 aa8.4□□□□□ -1.06
CMTM1-207ENST00000465057 E9PCH4 1651 aa8.4□□□□□ -1.07
CMTM1-207ENST00000465057 FDX1P10109 184 aa8.39□□□□□ -1.07
CMTM1-207ENST00000465057 MMP16P51512 607 aa8.39□□□□□ -1.07
CMTM1-207ENST00000465057 LAPTM4AQ15012 233 aa8.39□□□□□ -1.07
CMTM1-207ENST00000465057 FCF1Q9Y324 198 aaKnown RBP8.39□□□□□ -1.07
CMTM1-207ENST00000465057 NOS1P29475 1434 aa8.38□□□□□ -1.07
CMTM1-207ENST00000465057 MOXD2PA6NHM9 499 aa8.38□□□□□ -1.07
CMTM1-207ENST00000465057 SOCS7O14512 581 aa8.38□□□□□ -1.07
CMTM1-207ENST00000465057 GFRA3O60609 400 aa8.38□□□□□ -1.07
CMTM1-207ENST00000465057 NDUFV2P19404 249 aa8.38□□□□□ -1.07
CMTM1-207ENST00000465057 DIXDC1Q155Q3 683 aa8.38□□□□□ -1.07
CMTM1-207ENST00000465057 ZNF598Q86UK7 904 aaKnown RBP8.38□□□□□ -1.07
CMTM1-207ENST00000465057 TXNDC2Q86VQ3 553 aa8.38□□□□□ -1.07
CMTM1-207ENST00000465057 SYMPKQ92797 1274 aaKnown RBP8.38□□□□□ -1.07
CMTM1-207ENST00000465057 PCDHGC3Q9UN70 934 aa8.38□□□□□ -1.07
CMTM1-207ENST00000465057 ANKRD50Q9ULJ7 1429 aa8.37□□□□□ -1.07
CMTM1-207ENST00000465057 TMEM2Q9UHN6 1383 aa8.37□□□□□ -1.07
CMTM1-207ENST00000465057 IQGAP3Q86VI3 1631 aa8.37□□□□□ -1.07
CMTM1-207ENST00000465057 TBC1D2Q9BYX2 928 aa8.37□□□□□ -1.07
CMTM1-207ENST00000465057 TMEM131LA2VDJ0 1609 aa8.36□□□□□ -1.07
CMTM1-207ENST00000465057 CHD2O14647 1828 aaKnown RBP8.36□□□□□ -1.07
CMTM1-207ENST00000465057 NWD1Q149M9 1564 aa8.36□□□□□ -1.07
CMTM1-207ENST00000465057 DXOO77932 396 aaKnown RBP8.36□□□□□ -1.07
CMTM1-207ENST00000465057 GJA5P36382 358 aa8.36□□□□□ -1.07
CMTM1-207ENST00000465057 RPIAP49247 311 aa8.36□□□□□ -1.07
CMTM1-207ENST00000465057 IDI1Q13907 227 aa8.36□□□□□ -1.07
CMTM1-207ENST00000465057 RETREG3Q86VR2 466 aa8.36□□□□□ -1.07
CMTM1-207ENST00000465057 ROBO1Q9Y6N7 1651 aa8.36□□□□□ -1.07
CMTM1-207ENST00000465057 RPRD2Q5VT52 1461 aaKnown RBP8.35□□□□□ -1.07
CMTM1-207ENST00000465057 EID1Q9Y6B2 187 aa8.35□□□□□ -1.07
CMTM1-207ENST00000465057 SPHKAPQ2M3C7 1700 aa8.34□□□□□ -1.07
CMTM1-207ENST00000465057 C6orf229H3BNL8 230 aa8.34□□□□□ -1.07
CMTM1-207ENST00000465057 NRG2O14511 850 aaPredicted RBP8.34□□□□□ -1.07
CMTM1-207ENST00000465057 ZNF697Q5TEC3 545 aa8.34□□□□□ -1.07
CMTM1-207ENST00000465057 PDZRN3Q9UPQ7 1066 aa8.34□□□□□ -1.07
CMTM1-207ENST00000465057 ACIN1Q9UKV3 1341 aaKnown RBP8.33□□□□□ -1.08
CMTM1-207ENST00000465057 ZFYVE9O95405 1425 aa8.33□□□□□ -1.08
CMTM1-207ENST00000465057 JUNDP17535 347 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms