RNA–Protein interactions for RNA: ENST00000465023.1

IFT27-207, Transcript of intraflagellar transport 27, humanhuman

TSL 5

Gene IFT27, Length 406 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT27-207ENST00000465023 SLC27A3Q5K4L6 730 aa12.05□□□□□ -0.48
IFT27-207ENST00000465023 STAC3Q96MF2 364 aa12.05□□□□□ -0.48
IFT27-207ENST00000465023 KIF13BQ9NQT8 1826 aa12.04□□□□□ -0.48
IFT27-207ENST00000465023 BRCA1P38398 1863 aaKnown RBP12.04□□□□□ -0.48
IFT27-207ENST00000465023 MSH5O43196 834 aa12.04□□□□□ -0.48
IFT27-207ENST00000465023 SYTL4Q96C24 671 aaPredicted RBP12.04□□□□□ -0.48
IFT27-207ENST00000465023 TTC21AQ8NDW8 1320 aa12.04□□□□□ -0.48
IFT27-207ENST00000465023 PCNTO95613 3336 aa12.03□□□□□ -0.48
IFT27-207ENST00000465023 KTN1Q86UP2 1357 aaKnown RBP12.03□□□□□ -0.48
IFT27-207ENST00000465023 ANKRD36BQ8N2N9 1353 aa12.03□□□□□ -0.48
IFT27-207ENST00000465023 MEGF6O75095 1541 aa12.02□□□□□ -0.48
IFT27-207ENST00000465023 CAPN15O75808 1086 aa12.02□□□□□ -0.49
IFT27-207ENST00000465023 ANKRD24Q8TF21 1146 aa12.01□□□□□ -0.49
IFT27-207ENST00000465023 KIF3CO14782 793 aa12□□□□□ -0.49
IFT27-207ENST00000465023 COL23A1Q86Y22 540 aaPredicted RBP12□□□□□ -0.49
IFT27-207ENST00000465023 DDX54Q8TDD1 881 aaKnown RBP12□□□□□ -0.49
IFT27-207ENST00000465023 CCNL1Q9UK58 526 aaPredicted RBP12□□□□□ -0.49
IFT27-207ENST00000465023 EVC2Q86UK5 1308 aa12□□□□□ -0.49
IFT27-207ENST00000465023 CD163L1Q9NR16 1453 aa12□□□□□ -0.49
IFT27-207ENST00000465023 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.99□□□□□ -0.49
IFT27-207ENST00000465023 IGSF1Q8N6C5 1336 aa11.99□□□□□ -0.49
IFT27-207ENST00000465023 ARFGEF1Q9Y6D6 1849 aa11.99□□□□□ -0.49
IFT27-207ENST00000465023 MAP2P11137 1827 aaKnown RBP11.98□□□□□ -0.49
IFT27-207ENST00000465023 TNRC6CQ9HCJ0 1690 aaKnown RBP11.98□□□□□ -0.49
IFT27-207ENST00000465023 USP31Q70CQ4 1352 aa11.98□□□□□ -0.49
IFT27-207ENST00000465023 PRIM1P49642 420 aaKnown RBP11.98□□□□□ -0.49
IFT27-207ENST00000465023 APLP1P51693 650 aa11.98□□□□□ -0.49
IFT27-207ENST00000465023 TRIM26Q12899 539 aaPredicted RBP11.98□□□□□ -0.49
IFT27-207ENST00000465023 NME9Q86XW9 330 aa11.98□□□□□ -0.49
IFT27-207ENST00000465023 USP47Q96K76 1375 aa11.97□□□□□ -0.49
IFT27-207ENST00000465023 SBNO2Q9Y2G9 1366 aa11.97□□□□□ -0.49
IFT27-207ENST00000465023 CD2APQ9Y5K6 639 aa11.96□□□□□ -0.49
IFT27-207ENST00000465023 C4AP0C0L4 1744 aa11.95□□□□□ -0.5
IFT27-207ENST00000465023 COL13A1Q5TAT6 717 aaPredicted RBP11.95□□□□□ -0.5
IFT27-207ENST00000465023 LTV1Q96GA3 475 aaPredicted RBP11.95□□□□□ -0.5
IFT27-207ENST00000465023 HTRA3P83110 453 aa11.94□□□□□ -0.5
IFT27-207ENST00000465023 ZNF692Q9BU19 519 aaPredicted RBP11.94□□□□□ -0.5
IFT27-207ENST00000465023 KIF20BQ96Q89 1820 aa11.94□□□□□ -0.5
IFT27-207ENST00000465023 PXDNLA1KZ92 1463 aa11.94□□□□□ -0.5
IFT27-207ENST00000465023 EDC4Q6P2E9 1401 aaKnown RBP11.94□□□□□ -0.5
IFT27-207ENST00000465023 PALLDQ8WX93 1383 aa11.93□□□□□ -0.5
IFT27-207ENST00000465023 DNAJC5GQ8N7S2 189 aa11.93□□□□□ -0.5
IFT27-207ENST00000465023 SBF1O95248 1867 aa11.93□□□□□ -0.5
IFT27-207ENST00000465023 TIAM2Q8IVF5 1701 aa11.92□□□□□ -0.5
IFT27-207ENST00000465023 PHF14O94880 888 aa11.92□□□□□ -0.5
IFT27-207ENST00000465023 AMIGO3Q86WK7 504 aa11.92□□□□□ -0.5
IFT27-207ENST00000465023 ROCK2O75116 1388 aaKnown RBP11.92□□□□□ -0.5
IFT27-207ENST00000465023 SMIM5Q71RC9 77 aa11.91□□□□□ -0.5
IFT27-207ENST00000465023 NMRK2Q9NPI5 230 aa11.91□□□□□ -0.5
IFT27-207ENST00000465023 COL5A3P25940 1745 aaPredicted RBP11.91□□□□□ -0.5
IFT27-207ENST00000465023 A0A1W2PP64 1363 aa11.91□□□□□ -0.5
IFT27-207ENST00000465023 TNS4Q8IZW8 715 aa11.9□□□□□ -0.5
IFT27-207ENST00000465023 KCPQ6ZWJ8 1503 aa11.9□□□□□ -0.5
IFT27-207ENST00000465023 NSD3Q9BZ95 1437 aa11.89□□□□□ -0.51
IFT27-207ENST00000465023 TOMM70O94826 608 aa11.89□□□□□ -0.51
IFT27-207ENST00000465023 AK7Q96M32 723 aa11.89□□□□□ -0.51
IFT27-207ENST00000465023 SIN3AQ96ST3 1273 aa11.89□□□□□ -0.51
IFT27-207ENST00000465023 CCDC88AQ3V6T2 1871 aa11.89□□□□□ -0.51
IFT27-207ENST00000465023 C10orf71Q711Q0 1435 aa11.88□□□□□ -0.51
IFT27-207ENST00000465023 ZCRB1Q8TBF4 217 aaKnown RBP11.88□□□□□ -0.51
IFT27-207ENST00000465023 KLRG1Q96E93 195 aa11.88□□□□□ -0.51
IFT27-207ENST00000465023 MAP3K19Q56UN5 1328 aa11.87□□□□□ -0.51
IFT27-207ENST00000465023 USHBP1Q8N6Y0 703 aa11.87□□□□□ -0.51
IFT27-207ENST00000465023 FLAD1Q8NFF5 587 aa11.87□□□□□ -0.51
IFT27-207ENST00000465023 IP6K1Q92551 441 aa11.87□□□□□ -0.51
IFT27-207ENST00000465023 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.86□□□□□ -0.51
IFT27-207ENST00000465023 PRELPP51888 382 aa11.86□□□□□ -0.51
IFT27-207ENST00000465023 TMC1Q8TDI8 760 aa11.86□□□□□ -0.51
IFT27-207ENST00000465023 RTL1A6NKG5 1358 aa11.86□□□□□ -0.51
IFT27-207ENST00000465023 PLEKHG2Q9H7P9 1386 aa11.86□□□□□ -0.51
IFT27-207ENST00000465023 ANKRD26Q9UPS8 1709 aa11.86□□□□□ -0.51
IFT27-207ENST00000465023 HOXC9P31274 260 aa11.85□□□□□ -0.51
IFT27-207ENST00000465023 NEUROD1Q13562 356 aa11.85□□□□□ -0.51
IFT27-207ENST00000465023 JMYQ8N9B5 988 aa11.85□□□□□ -0.51
IFT27-207ENST00000465023 SMG6Q86US8 1419 aaKnown RBP11.85□□□□□ -0.51
IFT27-207ENST00000465023 PCDH11XQ9BZA7 1347 aa11.85□□□□□ -0.51
IFT27-207ENST00000465023 PCDH11YQ9BZA8 1340 aa11.85□□□□□ -0.51
IFT27-207ENST00000465023 MPRIPQ6WCQ1 1025 aa11.84□□□□□ -0.51
IFT27-207ENST00000465023 HDGFL2Q7Z4V5 671 aaPredicted RBP11.84□□□□□ -0.51
IFT27-207ENST00000465023 RBM46Q8TBY0 533 aaKnown RBP11.84□□□□□ -0.51
IFT27-207ENST00000465023 L3MBTL2Q969R5 705 aa11.84□□□□□ -0.51
IFT27-207ENST00000465023 BCS1LQ9Y276 419 aa11.84□□□□□ -0.51
IFT27-207ENST00000465023 MYH14Q7Z406 1995 aaKnown RBP11.84□□□□□ -0.51
IFT27-207ENST00000465023 DLEC1Q9Y238 1755 aa11.84□□□□□ -0.51
IFT27-207ENST00000465023 FBLN1P23142 703 aa11.83□□□□□ -0.52
IFT27-207ENST00000465023 C16orf71Q8IYS4 520 aaPredicted RBP11.83□□□□□ -0.52
IFT27-207ENST00000465023 ZNF831Q5JPB2 1677 aa11.82□□□□□ -0.52
IFT27-207ENST00000465023 MMP10P09238 476 aa11.82□□□□□ -0.52
IFT27-207ENST00000465023 AMPHP49418 695 aa11.82□□□□□ -0.52
IFT27-207ENST00000465023 SLC12A5Q9H2X9 1139 aa11.82□□□□□ -0.52
IFT27-207ENST00000465023 GNPATO15228 680 aa11.81□□□□□ -0.52
IFT27-207ENST00000465023 SSFA2P28290 1259 aa11.81□□□□□ -0.52
IFT27-207ENST00000465023 LINC00116Q8NCU8 138 aa11.81□□□□□ -0.52
IFT27-207ENST00000465023 RAPGEF4Q8WZA2 1011 aa11.81□□□□□ -0.52
IFT27-207ENST00000465023 HSPA1AP0DMV8 641 aaKnown RBP11.8□□□□□ -0.52
IFT27-207ENST00000465023 HSPA1BP0DMV9 641 aaKnown RBP11.8□□□□□ -0.52
IFT27-207ENST00000465023 NBPF6Q5VWK0 638 aa11.8□□□□□ -0.52
IFT27-207ENST00000465023 ARHGAP27Q6ZUM4 889 aa11.8□□□□□ -0.52
IFT27-207ENST00000465023 NBPF4Q96M43 638 aa11.8□□□□□ -0.52
IFT27-207ENST00000465023 AFDNP55196 1824 aaKnown RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms