RNA–Protein interactions for RNA: ENST00000464748.1

CDK11A-211, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 3

Gene CDK11A, Length 381 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-211ENST00000464748 CFAP53Q96M91 514 aa27.02■■□□□ 1.92
CDK11A-211ENST00000464748 DIAPH1O60610 1272 aaKnown RBP27.01■■□□□ 1.91
CDK11A-211ENST00000464748 COL3A1P02461 1466 aaPredicted RBP27■■□□□ 1.91
CDK11A-211ENST00000464748 PKD1L3Q7Z443 1732 aa27■■□□□ 1.91
CDK11A-211ENST00000464748 SHANK3Q9BYB0 1731 aa26.99■■□□□ 1.91
CDK11A-211ENST00000464748 SBF2Q86WG5 1849 aa26.99■■□□□ 1.91
CDK11A-211ENST00000464748 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.98■■□□□ 1.91
CDK11A-211ENST00000464748 KDRP35968 1356 aa26.97■■□□□ 1.91
CDK11A-211ENST00000464748 TNS1Q9HBL0 1735 aaKnown RBP26.97■■□□□ 1.91
CDK11A-211ENST00000464748 PCDH11XQ9BZA7 1347 aa26.96■■□□□ 1.91
CDK11A-211ENST00000464748 PCDH11YQ9BZA8 1340 aa26.96■■□□□ 1.91
CDK11A-211ENST00000464748 SPG7Q9UQ90 795 aa26.95■■□□□ 1.9
CDK11A-211ENST00000464748 TRIM37O94972 964 aa26.94■■□□□ 1.9
CDK11A-211ENST00000464748 DDX54Q8TDD1 881 aaKnown RBP26.94■■□□□ 1.9
CDK11A-211ENST00000464748 BAG6P46379 1132 aa26.93■■□□□ 1.9
CDK11A-211ENST00000464748 SULT6B1Q6IMI4 303 aa26.92■■□□□ 1.9
CDK11A-211ENST00000464748 BCL11BQ9C0K0 894 aaPredicted RBP26.91■■□□□ 1.9
CDK11A-211ENST00000464748 NUDCQ9Y266 331 aa26.91■■□□□ 1.9
CDK11A-211ENST00000464748 NHSQ6T4R5 1651 aa26.91■■□□□ 1.9
CDK11A-211ENST00000464748 AMOTQ4VCS5 1084 aa26.89■■□□□ 1.9
CDK11A-211ENST00000464748 AEBP1Q8IUX7 1158 aa26.89■■□□□ 1.9
CDK11A-211ENST00000464748 MYBBP1AQ9BQG0 1328 aaKnown RBP26.89■■□□□ 1.89
CDK11A-211ENST00000464748 PLEKHO1Q53GL0 409 aaPredicted RBP26.88■■□□□ 1.89
CDK11A-211ENST00000464748 U2SURPO15042 1029 aaKnown RBP26.86■■□□□ 1.89
CDK11A-211ENST00000464748 PRKRIP1Q9H875 184 aaPredicted RBP26.86■■□□□ 1.89
CDK11A-211ENST00000464748 KAT6BQ8WYB5 2073 aa26.86■■□□□ 1.89
CDK11A-211ENST00000464748 RGPD3A6NKT7 1758 aaPredicted RBP26.85■■□□□ 1.89
CDK11A-211ENST00000464748 RGPD4Q7Z3J3 1758 aa26.85■■□□□ 1.89
CDK11A-211ENST00000464748 CYP27B1O15528 508 aa26.85■■□□□ 1.89
CDK11A-211ENST00000464748 APBA3O96018 575 aa26.85■■□□□ 1.89
CDK11A-211ENST00000464748 DOT1LQ8TEK3 1739 aa26.85■■□□□ 1.89
CDK11A-211ENST00000464748 IFNL2Q8IZJ0 200 aa26.84■■□□□ 1.89
CDK11A-211ENST00000464748 HMOX1P09601 288 aa26.83■■□□□ 1.89
CDK11A-211ENST00000464748 NKX1-1Q15270 411 aaPredicted RBP26.83■■□□□ 1.89
CDK11A-211ENST00000464748 DEFB132Q7Z7B7 95 aa26.83■■□□□ 1.89
CDK11A-211ENST00000464748 HSP90AB1P08238 724 aaKnown RBP26.81■■□□□ 1.88
CDK11A-211ENST00000464748 PHKG2P15735 406 aa26.81■■□□□ 1.88
CDK11A-211ENST00000464748 ACSBG1Q96GR2 724 aa26.81■■□□□ 1.88
CDK11A-211ENST00000464748 PLSCR1O15162 318 aa26.8■■□□□ 1.88
CDK11A-211ENST00000464748 BTAF1O14981 1849 aa26.79■■□□□ 1.88
CDK11A-211ENST00000464748 KCNQ2O43526 872 aa26.79■■□□□ 1.88
CDK11A-211ENST00000464748 ZNF530Q6P9A1 599 aaPredicted RBP26.79■■□□□ 1.88
CDK11A-211ENST00000464748 U2AF1L5P0DN76 240 aaPredicted RBP26.78■■□□□ 1.88
CDK11A-211ENST00000464748 U2AF1Q01081 240 aaKnown RBP eCLIP26.78■■□□□ 1.88
CDK11A-211ENST00000464748 EN1Q05925 392 aaPredicted RBP26.78■■□□□ 1.88
CDK11A-211ENST00000464748 C1orf141Q5JVX7 400 aa26.78■■□□□ 1.88
CDK11A-211ENST00000464748 CAMKK2Q96RR4 588 aa26.77■■□□□ 1.88
CDK11A-211ENST00000464748 FCHSD2O94868 740 aa26.76■■□□□ 1.87
CDK11A-211ENST00000464748 PRIM1P49642 420 aaKnown RBP26.76■■□□□ 1.87
CDK11A-211ENST00000464748 TOGARAM1Q9Y4F4 1720 aa26.76■■□□□ 1.87
CDK11A-211ENST00000464748 PTF1AQ7RTS3 328 aa26.75■■□□□ 1.87
CDK11A-211ENST00000464748 SYTL4Q96C24 671 aaPredicted RBP26.75■■□□□ 1.87
CDK11A-211ENST00000464748 RSPH6AQ9H0K4 717 aa26.75■■□□□ 1.87
CDK11A-211ENST00000464748 RREB1Q92766 1687 aa26.75■■□□□ 1.87
CDK11A-211ENST00000464748 DCAF5Q96JK2 942 aa26.74■■□□□ 1.87
CDK11A-211ENST00000464748 ITGB4P16144 1822 aa26.74■■□□□ 1.87
CDK11A-211ENST00000464748 ANP32CO43423 234 aa26.73■■□□□ 1.87
CDK11A-211ENST00000464748 EZH2Q15910 746 aaKnown RBP26.73■■□□□ 1.87
CDK11A-211ENST00000464748 AKAP4Q5JQC9 854 aa26.73■■□□□ 1.87
CDK11A-211ENST00000464748 PRKAR2BP31323 418 aa26.71■■□□□ 1.87
CDK11A-211ENST00000464748 GAS2L2Q8NHY3 880 aa26.71■■□□□ 1.87
CDK11A-211ENST00000464748 PNNQ9H307 717 aaKnown RBP26.71■■□□□ 1.87
CDK11A-211ENST00000464748 ERVV-2B6SEH9 535 aa26.7■■□□□ 1.86
CDK11A-211ENST00000464748 MTHFSDQ2M296 383 aaKnown RBP26.69■■□□□ 1.86
CDK11A-211ENST00000464748 NUP188Q5SRE5 1749 aa26.68■■□□□ 1.86
CDK11A-211ENST00000464748 KDM6AO15550 1401 aaPredicted RBP26.68■■□□□ 1.86
CDK11A-211ENST00000464748 NEFMP07197 916 aa26.68■■□□□ 1.86
CDK11A-211ENST00000464748 SCN11AQ9UI33 1791 aa26.68■■□□□ 1.86
CDK11A-211ENST00000464748 TMOD3Q9NYL9 352 aa26.67■■□□□ 1.86
CDK11A-211ENST00000464748 MPRIPQ6WCQ1 1025 aa26.66■■□□□ 1.86
CDK11A-211ENST00000464748 TXNRD1Q16881 649 aa26.65■■□□□ 1.86
CDK11A-211ENST00000464748 LY75O60449 1722 aa26.65■■□□□ 1.86
CDK11A-211ENST00000464748 SMARCC1Q92922 1105 aaPredicted RBP26.64■■□□□ 1.86
CDK11A-211ENST00000464748 VIRMAQ69YN4 1812 aaKnown RBP26.64■■□□□ 1.85
CDK11A-211ENST00000464748 ADAMTS7Q9UKP4 1686 aa26.63■■□□□ 1.85
CDK11A-211ENST00000464748 MAP3K5Q99683 1374 aa26.63■■□□□ 1.85
CDK11A-211ENST00000464748 WDR43Q15061 677 aaKnown RBP eCLIP26.63■■□□□ 1.85
CDK11A-211ENST00000464748 HMGB2P26583 209 aaKnown RBP26.62■■□□□ 1.85
CDK11A-211ENST00000464748 SLC27A3Q5K4L6 730 aa26.62■■□□□ 1.85
CDK11A-211ENST00000464748 PIGBQ92521 554 aa26.62■■□□□ 1.85
CDK11A-211ENST00000464748 PHACTR3Q96KR7 559 aa26.62■■□□□ 1.85
CDK11A-211ENST00000464748 GNAT3A8MTJ3 354 aa26.61■■□□□ 1.85
CDK11A-211ENST00000464748 CABP4P57796 275 aa26.61■■□□□ 1.85
CDK11A-211ENST00000464748 PROM2Q8N271 834 aa26.61■■□□□ 1.85
CDK11A-211ENST00000464748 NBPF14Q5TI25 921 aa26.6■■□□□ 1.85
CDK11A-211ENST00000464748 MRC1P22897 1456 aa26.6■■□□□ 1.85
CDK11A-211ENST00000464748 RNMTO43148 476 aaKnown RBP26.59■■□□□ 1.85
CDK11A-211ENST00000464748 PLEKHF1Q96S99 279 aa26.59■■□□□ 1.85
CDK11A-211ENST00000464748 MAPK8IP3Q9UPT6 1336 aa26.59■■□□□ 1.85
CDK11A-211ENST00000464748 PALLDQ8WX93 1383 aa26.58■■□□□ 1.85
CDK11A-211ENST00000464748 SLC52A2Q9HAB3 445 aa26.56■■□□□ 1.84
CDK11A-211ENST00000464748 HTATSF1O43719 755 aaKnown RBP26.55■■□□□ 1.84
CDK11A-211ENST00000464748 LGR6Q9HBX8 967 aa26.55■■□□□ 1.84
CDK11A-211ENST00000464748 PAPPAQ13219 1627 aa26.54■■□□□ 1.84
CDK11A-211ENST00000464748 CCNL1Q9UK58 526 aaPredicted RBP26.54■■□□□ 1.84
CDK11A-211ENST00000464748 NFATC2IPQ8NCF5 419 aa26.53■■□□□ 1.84
CDK11A-211ENST00000464748 RTF1Q92541 710 aaKnown RBP26.53■■□□□ 1.84
CDK11A-211ENST00000464748 NFE2L2Q16236 605 aa26.52■■□□□ 1.84
CDK11A-211ENST00000464748 CEMIPQ8WUJ3 1361 aa26.52■■□□□ 1.84
CDK11A-211ENST00000464748 ATG3Q9NT62 314 aa26.52■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 160.4 ms