RNA–Protein interactions for RNA: ENST00000463994.4

CDKL5-203, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5

Gene CDKL5, Length 2,632 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-203ENST00000463994 ARHGEF40Q8TER5 1519 aa8.55□□□□□ -1.04
CDKL5-203ENST00000463994 KIF14Q15058 1648 aa8.54□□□□□ -1.04
CDKL5-203ENST00000463994 SSFA2P28290 1259 aa8.54□□□□□ -1.04
CDKL5-203ENST00000463994 ARID4AP29374 1257 aaPredicted RBP8.54□□□□□ -1.04
CDKL5-203ENST00000463994 RPAINQ86UA6 219 aa8.54□□□□□ -1.04
CDKL5-203ENST00000463994 CCDC82Q8N4S0 544 aa8.54□□□□□ -1.04
CDKL5-203ENST00000463994 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.54□□□□□ -1.04
CDKL5-203ENST00000463994 ITFG2Q969R8 447 aa8.54□□□□□ -1.04
CDKL5-203ENST00000463994 ATG3Q9NT62 314 aa8.54□□□□□ -1.04
CDKL5-203ENST00000463994 MRVI1Q9Y6F6 885 aa8.54□□□□□ -1.04
CDKL5-203ENST00000463994 KLHL33A6NCF5 533 aa8.54□□□□□ -1.04
CDKL5-203ENST00000463994 SMTNL1A8MU46 457 aa8.54□□□□□ -1.04
CDKL5-203ENST00000463994 BIRC2Q13490 618 aa8.54□□□□□ -1.04
CDKL5-203ENST00000463994 CASC1Q6TDU7 716 aa8.54□□□□□ -1.04
CDKL5-203ENST00000463994 C17orf53Q8N3J3 647 aaPredicted RBP8.54□□□□□ -1.04
CDKL5-203ENST00000463994 NFATC2IPQ8NCF5 419 aa8.54□□□□□ -1.04
CDKL5-203ENST00000463994 LMBRD1Q9NUN5 540 aa8.54□□□□□ -1.04
CDKL5-203ENST00000463994 CCDC196A0A1B0GTZ2 297 aa8.53□□□□□ -1.04
CDKL5-203ENST00000463994 MPHOSPH10O00566 681 aaKnown RBP8.53□□□□□ -1.04
CDKL5-203ENST00000463994 LIG1P18858 919 aa8.53□□□□□ -1.04
CDKL5-203ENST00000463994 TSGA10IPQ3SY00 556 aa8.53□□□□□ -1.04
CDKL5-203ENST00000463994 MCTP1Q6DN14 999 aa8.53□□□□□ -1.04
CDKL5-203ENST00000463994 KRBA2Q6ZNG9 492 aa8.53□□□□□ -1.04
CDKL5-203ENST00000463994 SUGP1Q8IWZ8 645 aaKnown RBP8.53□□□□□ -1.04
CDKL5-203ENST00000463994 TTC12Q9H892 705 aaPredicted RBP8.53□□□□□ -1.04
CDKL5-203ENST00000463994 ADAMTSL3P82987 1691 aa8.53□□□□□ -1.04
CDKL5-203ENST00000463994 CGNL1Q0VF96 1302 aa8.53□□□□□ -1.04
CDKL5-203ENST00000463994 KDM4FA0A1W2PPD8 638 aa8.53□□□□□ -1.04
CDKL5-203ENST00000463994 CHGAP10645 457 aaKnown RBP8.53□□□□□ -1.04
CDKL5-203ENST00000463994 MAP2K2P36507 400 aa8.53□□□□□ -1.04
CDKL5-203ENST00000463994 C11orf91Q3C1V1 193 aa8.53□□□□□ -1.04
CDKL5-203ENST00000463994 POTEDQ86YR6 584 aa8.53□□□□□ -1.04
CDKL5-203ENST00000463994 ANKRD20A12PQ8NF67 263 aa8.53□□□□□ -1.04
CDKL5-203ENST00000463994 KIAA1524Q8TCG1 905 aa8.53□□□□□ -1.04
CDKL5-203ENST00000463994 NUP153P49790 1475 aaKnown RBP8.53□□□□□ -1.04
CDKL5-203ENST00000463994 COL17A1Q9UMD9 1497 aaPredicted RBP8.53□□□□□ -1.04
CDKL5-203ENST00000463994 MAFGO15525 162 aa8.52□□□□□ -1.04
CDKL5-203ENST00000463994 TPM3P06753 285 aa8.52□□□□□ -1.04
CDKL5-203ENST00000463994 SRLQ86TD4 932 aa8.52□□□□□ -1.04
CDKL5-203ENST00000463994 NLRP13Q86W25 1043 aa8.52□□□□□ -1.04
CDKL5-203ENST00000463994 CCDC191Q8NCU4 936 aa8.52□□□□□ -1.04
CDKL5-203ENST00000463994 FAM212AQ96EL1 285 aa8.52□□□□□ -1.04
CDKL5-203ENST00000463994 ABCC5O15440 1437 aa8.52□□□□□ -1.05
CDKL5-203ENST00000463994 KDM5CP41229 1560 aa8.52□□□□□ -1.05
CDKL5-203ENST00000463994 GPS2Q13227 327 aa8.52□□□□□ -1.05
CDKL5-203ENST00000463994 BMS1Q14692 1282 aaKnown RBP8.52□□□□□ -1.05
CDKL5-203ENST00000463994 PPP2R5AQ15172 486 aa8.52□□□□□ -1.05
CDKL5-203ENST00000463994 RABEP1Q15276 862 aa8.52□□□□□ -1.05
CDKL5-203ENST00000463994 UVSSAQ2YD98 709 aa8.52□□□□□ -1.05
CDKL5-203ENST00000463994 MCTP2Q6DN12 878 aa8.52□□□□□ -1.05
CDKL5-203ENST00000463994 RNF214Q8ND24 703 aa8.52□□□□□ -1.05
CDKL5-203ENST00000463994 BCORL1Q5H9F3 1711 aa8.52□□□□□ -1.05
CDKL5-203ENST00000463994 SYCE3A1L190 88 aa8.51□□□□□ -1.05
CDKL5-203ENST00000463994 PMFBP1Q8TBY8 1022 aa8.51□□□□□ -1.05
CDKL5-203ENST00000463994 CLUAP1Q96AJ1 413 aa8.51□□□□□ -1.05
CDKL5-203ENST00000463994 BORCS6Q96GS4 357 aa8.51□□□□□ -1.05
CDKL5-203ENST00000463994 FAM210AQ96ND0 272 aa8.51□□□□□ -1.05
CDKL5-203ENST00000463994 CEP89Q96ST8 783 aa8.51□□□□□ -1.05
CDKL5-203ENST00000463994 NBPF3Q9H094 633 aa8.51□□□□□ -1.05
CDKL5-203ENST00000463994 TSPY26PQ9H489 355 aa8.51□□□□□ -1.05
CDKL5-203ENST00000463994 LCMT1Q9UIC8 334 aa8.51□□□□□ -1.05
CDKL5-203ENST00000463994 FRMPD1Q5SYB0 1578 aa8.51□□□□□ -1.05
CDKL5-203ENST00000463994 USP47Q96K76 1375 aa8.51□□□□□ -1.05
CDKL5-203ENST00000463994 KDM4AO75164 1064 aa8.51□□□□□ -1.05
CDKL5-203ENST00000463994 MAGEA9P43362 315 aa8.51□□□□□ -1.05
CDKL5-203ENST00000463994 RBM6P78332 1123 aaKnown RBP8.51□□□□□ -1.05
CDKL5-203ENST00000463994 ZSCAN26Q16670 478 aa8.51□□□□□ -1.05
CDKL5-203ENST00000463994 FAM184AQ8NB25 1140 aa8.51□□□□□ -1.05
CDKL5-203ENST00000463994 RRP15Q9Y3B9 282 aaKnown RBP8.51□□□□□ -1.05
CDKL5-203ENST00000463994 UHRF1BP1Q6BDS2 1440 aa8.51□□□□□ -1.05
CDKL5-203ENST00000463994 PZPP20742 1482 aa8.51□□□□□ -1.05
CDKL5-203ENST00000463994 H0YHG0 523 aa8.5□□□□□ -1.05
CDKL5-203ENST00000463994 NUCB2P80303 420 aa8.5□□□□□ -1.05
CDKL5-203ENST00000463994 SARNPP82979 210 aaKnown RBP8.5□□□□□ -1.05
CDKL5-203ENST00000463994 SLFNL1Q499Z3 407 aa8.5□□□□□ -1.05
CDKL5-203ENST00000463994 KMT5BQ4FZB7 885 aa8.5□□□□□ -1.05
CDKL5-203ENST00000463994 RICTORQ6R327 1708 aa8.5□□□□□ -1.05
CDKL5-203ENST00000463994 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.5□□□□□ -1.053e-7■■■■□ 24.6
CDKL5-203ENST00000463994 ZNF513Q8N8E2 541 aaPredicted RBP8.5□□□□□ -1.05
CDKL5-203ENST00000463994 TBC1D22AQ8WUA7 517 aa8.5□□□□□ -1.05
CDKL5-203ENST00000463994 PAXBP1Q9Y5B6 917 aa8.5□□□□□ -1.05
CDKL5-203ENST00000463994 LRRFIP2Q9Y608 721 aaKnown RBP8.5□□□□□ -1.05
CDKL5-203ENST00000463994 PLEKHH1Q9ULM0 1364 aa8.5□□□□□ -1.05
CDKL5-203ENST00000463994 REREQ9P2R6 1566 aa8.5□□□□□ -1.05
CDKL5-203ENST00000463994 BLMP54132 1417 aaPredicted RBP8.5□□□□□ -1.05
CDKL5-203ENST00000463994 TPM4P67936 248 aa8.5□□□□□ -1.05
CDKL5-203ENST00000463994 E2F4Q16254 413 aa8.5□□□□□ -1.05
CDKL5-203ENST00000463994 PACS2Q86VP3 889 aa8.5□□□□□ -1.05
CDKL5-203ENST00000463994 NEK11Q8NG66 645 aa8.5□□□□□ -1.05
CDKL5-203ENST00000463994 ST7Q9NRC1 585 aa8.5□□□□□ -1.05
CDKL5-203ENST00000463994 ADGBQ8N7X0 1667 aa8.5□□□□□ -1.05
CDKL5-203ENST00000463994 CDK13Q14004 1512 aaKnown RBP8.5□□□□□ -1.05
CDKL5-203ENST00000463994 DUSP27Q5VZP5 1158 aa8.5□□□□□ -1.05
CDKL5-203ENST00000463994 CCDC112Q8NEF3 446 aa8.5□□□□□ -1.05
CDKL5-203ENST00000463994 RBM27Q9P2N5 1060 aaKnown RBP8.5□□□□□ -1.05
CDKL5-203ENST00000463994 PLEKHG2Q9H7P9 1386 aa8.49□□□□□ -1.05
CDKL5-203ENST00000463994 RALGAPBQ86X10 1494 aa8.49□□□□□ -1.05
CDKL5-203ENST00000463994 ARHGEF12Q9NZN5 1544 aa8.49□□□□□ -1.05
CDKL5-203ENST00000463994 K7ELQ4 463 aaPredicted RBP8.49□□□□□ -1.05
CDKL5-203ENST00000463994 MAP9Q49MG5 647 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms