RNA–Protein interactions for RNA: ENST00000463822.1

RGPD6-207, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

TSL 1 (best)

Gene RGPD6, Length 6,902 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-207ENST00000463822 RGS3P49796 1198 aa5.76□□□□□ -1.49
RGPD6-207ENST00000463822 TAF7Q15545 349 aaPredicted RBP5.76□□□□□ -1.49
RGPD6-207ENST00000463822 EIF2S2P20042 333 aaKnown RBP5.76□□□□□ -1.49
RGPD6-207ENST00000463822 ERBB3P21860 1342 aa5.75□□□□□ -1.49
RGPD6-207ENST00000463822 TNS3Q68CZ2 1445 aa5.75□□□□□ -1.49
RGPD6-207ENST00000463822 AKAP4Q5JQC9 854 aa5.75□□□□□ -1.49
RGPD6-207ENST00000463822 CENPQQ7L2Z9 268 aaPredicted RBP5.75□□□□□ -1.49
RGPD6-207ENST00000463822 MIS18AQ9NYP9 233 aa5.75□□□□□ -1.49
RGPD6-207ENST00000463822 MAP3K5Q99683 1374 aa5.75□□□□□ -1.49
RGPD6-207ENST00000463822 FKBP5Q13451 457 aaPredicted RBP5.75□□□□□ -1.49
RGPD6-207ENST00000463822 CCDC30Q5VVM6 783 aa5.75□□□□□ -1.49
RGPD6-207ENST00000463822 SLC4A10Q6U841 1118 aa5.75□□□□□ -1.49
RGPD6-207ENST00000463822 MPRIPQ6WCQ1 1025 aa5.75□□□□□ -1.49
RGPD6-207ENST00000463822 NOB1Q9ULX3 412 aaKnown RBP5.75□□□□□ -1.49
RGPD6-207ENST00000463822 USP19O94966 1318 aa5.75□□□□□ -1.49
RGPD6-207ENST00000463822 NUTM2BA6NNL0 878 aaPredicted RBP5.75□□□□□ -1.49
RGPD6-207ENST00000463822 NUTM2EB1AL46 878 aaPredicted RBP5.75□□□□□ -1.49
RGPD6-207ENST00000463822 NUTM2AQ8IVF1 878 aaPredicted RBP5.75□□□□□ -1.49
RGPD6-207ENST00000463822 IFNL2Q8IZJ0 200 aa5.75□□□□□ -1.49
RGPD6-207ENST00000463822 HDGFL1Q5TGJ6 251 aa5.75□□□□□ -1.49
RGPD6-207ENST00000463822 SLC4A2P04920 1241 aa5.75□□□□□ -1.49
RGPD6-207ENST00000463822 CHL1O00533 1208 aa5.74□□□□□ -1.49
RGPD6-207ENST00000463822 ERICH6Q7L0X2 663 aa5.74□□□□□ -1.49
RGPD6-207ENST00000463822 NECTIN2Q92692 538 aa5.74□□□□□ -1.49
RGPD6-207ENST00000463822 KIAA0232Q92628 1395 aa5.74□□□□□ -1.49
RGPD6-207ENST00000463822 MVPQ14764 893 aaKnown RBP5.74□□□□□ -1.49
RGPD6-207ENST00000463822 COL3A1P02461 1466 aaPredicted RBP5.74□□□□□ -1.49
RGPD6-207ENST00000463822 C8orf58Q8NAV2 365 aa5.74□□□□□ -1.49
RGPD6-207ENST00000463822 BTBD11A6QL63 1104 aa5.74□□□□□ -1.49
RGPD6-207ENST00000463822 VAMP4O75379 141 aa5.74□□□□□ -1.49
RGPD6-207ENST00000463822 KNDC1Q76NI1 1749 aa5.74□□□□□ -1.49
RGPD6-207ENST00000463822 ADAMTS2O95450 1211 aa5.74□□□□□ -1.49
RGPD6-207ENST00000463822 TSPYL6Q8N831 410 aa5.74□□□□□ -1.49
RGPD6-207ENST00000463822 DDX54Q8TDD1 881 aaKnown RBP5.73□□□□□ -1.49
RGPD6-207ENST00000463822 XRN1Q8IZH2 1706 aaKnown RBP5.73□□□□□ -1.49
RGPD6-207ENST00000463822 ZNF142P52746 1687 aaPredicted RBP5.73□□□□□ -1.49
RGPD6-207ENST00000463822 TRIM27P14373 513 aa5.73□□□□□ -1.49
RGPD6-207ENST00000463822 ARHGAP45Q92619 1136 aa5.73□□□□□ -1.49
RGPD6-207ENST00000463822 ZNF853P0CG23 659 aa5.73□□□□□ -1.49
RGPD6-207ENST00000463822 CABP4P57796 275 aa5.73□□□□□ -1.49
RGPD6-207ENST00000463822 BABAM1Q9NWV8 329 aa5.73□□□□□ -1.49
RGPD6-207ENST00000463822 DAXXQ9UER7 740 aaPredicted RBP5.73□□□□□ -1.49
RGPD6-207ENST00000463822 AXIN2Q9Y2T1 843 aa5.73□□□□□ -1.49
RGPD6-207ENST00000463822 KDRP35968 1356 aa5.73□□□□□ -1.49
RGPD6-207ENST00000463822 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.73□□□□□ -1.49
RGPD6-207ENST00000463822 LRRC7Q96NW7 1537 aa5.73□□□□□ -1.49
RGPD6-207ENST00000463822 HDAC5Q9UQL6 1122 aa5.73□□□□□ -1.49
RGPD6-207ENST00000463822 SOS2Q07890 1332 aaPredicted RBP5.72□□□□□ -1.49
RGPD6-207ENST00000463822 HMMRO75330 724 aa5.72□□□□□ -1.49
RGPD6-207ENST00000463822 ARXQ96QS3 562 aa5.72□□□□□ -1.49
RGPD6-207ENST00000463822 IL2RBP14784 551 aa5.72□□□□□ -1.49
RGPD6-207ENST00000463822 IQSEC2Q5JU85 1478 aa5.72□□□□□ -1.49
RGPD6-207ENST00000463822 ANP32AP39687 249 aaKnown RBP5.72□□□□□ -1.49
RGPD6-207ENST00000463822 KRT24Q2M2I5 525 aa5.72□□□□□ -1.49
RGPD6-207ENST00000463822 TMEM57Q8N5G2 664 aa5.72□□□□□ -1.49
RGPD6-207ENST00000463822 IL17REQ8NFR9 667 aa5.72□□□□□ -1.49
RGPD6-207ENST00000463822 ZCRB1Q8TBF4 217 aaKnown RBP5.72□□□□□ -1.49
RGPD6-207ENST00000463822 DCAF5Q96JK2 942 aa5.72□□□□□ -1.49
RGPD6-207ENST00000463822 BTG4Q9NY30 223 aa5.72□□□□□ -1.49
RGPD6-207ENST00000463822 WDR17Q8IZU2 1322 aa5.72□□□□□ -1.49
RGPD6-207ENST00000463822 RNMTO43148 476 aaKnown RBP5.71□□□□□ -1.49
RGPD6-207ENST00000463822 DDX58O95786 925 aaKnown RBP5.71□□□□□ -1.49
RGPD6-207ENST00000463822 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.71□□□□□ -1.49
RGPD6-207ENST00000463822 MRPL50Q8N5N7 158 aaKnown RBP5.71□□□□□ -1.49
RGPD6-207ENST00000463822 ZNF330Q9Y3S2 320 aaPredicted RBP5.71□□□□□ -1.49
RGPD6-207ENST00000463822 MEX3CQ5U5Q3 659 aaKnown RBP5.71□□□□□ -1.5
RGPD6-207ENST00000463822 SYTL4Q96C24 671 aaPredicted RBP5.71□□□□□ -1.5
RGPD6-207ENST00000463822 UPF2Q9HAU5 1272 aaKnown RBP5.71□□□□□ -1.5
RGPD6-207ENST00000463822 SETD1AO15047 1707 aaKnown RBP5.71□□□□□ -1.5
RGPD6-207ENST00000463822 SOS1Q07889 1333 aaPredicted RBP5.71□□□□□ -1.5
RGPD6-207ENST00000463822 LGR6Q9HBX8 967 aa5.71□□□□□ -1.5
RGPD6-207ENST00000463822 NEXNQ0ZGT2 675 aa5.71□□□□□ -1.5
RGPD6-207ENST00000463822 PCDH11XQ9BZA7 1347 aa5.7□□□□□ -1.5
RGPD6-207ENST00000463822 PCDH11YQ9BZA8 1340 aa5.7□□□□□ -1.5
RGPD6-207ENST00000463822 GNAI3P08754 354 aa5.7□□□□□ -1.5
RGPD6-207ENST00000463822 RLBP1P12271 317 aa5.7□□□□□ -1.5
RGPD6-207ENST00000463822 CCT4P50991 539 aaKnown RBP5.7□□□□□ -1.5
RGPD6-207ENST00000463822 TNNQ9UQP3 1299 aa5.7□□□□□ -1.5
RGPD6-207ENST00000463822 FLIIQ13045 1269 aa5.7□□□□□ -1.5
RGPD6-207ENST00000463822 NGLY1Q96IV0 654 aa5.7□□□□□ -1.5
RGPD6-207ENST00000463822 EXOC5O00471 708 aa5.7□□□□□ -1.5
RGPD6-207ENST00000463822 HOXB7P09629 217 aa5.7□□□□□ -1.5
RGPD6-207ENST00000463822 SRCIN1Q9C0H9 1055 aa5.7□□□□□ -1.5
RGPD6-207ENST00000463822 TSHZ2Q9NRE2 1034 aa5.7□□□□□ -1.5
RGPD6-207ENST00000463822 PTPRCP08575 1304 aa5.7□□□□□ -1.5
RGPD6-207ENST00000463822 DBF4Q9UBU7 674 aaPredicted RBP5.7□□□□□ -1.5
RGPD6-207ENST00000463822 NWD1Q149M9 1564 aa5.7□□□□□ -1.5
RGPD6-207ENST00000463822 FMNL2Q96PY5 1086 aa5.7□□□□□ -1.5
RGPD6-207ENST00000463822 LARP1Q6PKG0 1096 aaKnown RBP5.69□□□□□ -1.5
RGPD6-207ENST00000463822 TMOD3Q9NYL9 352 aa5.69□□□□□ -1.5
RGPD6-207ENST00000463822 APBB1O00213 710 aa5.69□□□□□ -1.5
RGPD6-207ENST00000463822 PHKG2P15735 406 aa5.69□□□□□ -1.5
RGPD6-207ENST00000463822 AIMP1Q12904 312 aaKnown RBP5.69□□□□□ -1.5
RGPD6-207ENST00000463822 CARD10Q9BWT7 1032 aa5.69□□□□□ -1.5
RGPD6-207ENST00000463822 OS9Q13438 667 aaPredicted RBP5.69□□□□□ -1.5
RGPD6-207ENST00000463822 CPDO75976 1380 aa5.69□□□□□ -1.5
RGPD6-207ENST00000463822 SLC39A6Q13433 755 aa5.69□□□□□ -1.5
RGPD6-207ENST00000463822 RBM42Q9BTD8 480 aaKnown RBP5.69□□□□□ -1.5
RGPD6-207ENST00000463822 UBTFL1P0CB47 393 aaPredicted RBP5.68□□□□□ -1.5
RGPD6-207ENST00000463822 NFATC2IPQ8NCF5 419 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms