RNA–Protein interactions for RNA: ENST00000463455.1

RTCB-202, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

TSL 2

Gene RTCB, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-202ENST00000463455 CARD14Q9BXL6 1004 aa16.48■□□□□ 0.23
RTCB-202ENST00000463455 INSRP06213 1382 aa16.48■□□□□ 0.23
RTCB-202ENST00000463455 FLT4P35916 1363 aa16.48■□□□□ 0.23
RTCB-202ENST00000463455 CGNL1Q0VF96 1302 aa16.47■□□□□ 0.23
RTCB-202ENST00000463455 HSPA5P11021 654 aaKnown RBP16.45■□□□□ 0.22
RTCB-202ENST00000463455 RRS1Q15050 365 aaKnown RBP16.45■□□□□ 0.22
RTCB-202ENST00000463455 ANKRD26Q9UPS8 1709 aa16.45■□□□□ 0.22
RTCB-202ENST00000463455 FBLN1P23142 703 aa16.44■□□□□ 0.22
RTCB-202ENST00000463455 POLA2Q14181 598 aa16.44■□□□□ 0.22
RTCB-202ENST00000463455 LTV1Q96GA3 475 aaPredicted RBP16.44■□□□□ 0.22
RTCB-202ENST00000463455 PTF1AQ7RTS3 328 aa16.42■□□□□ 0.22
RTCB-202ENST00000463455 NSD2O96028 1365 aa16.41■□□□□ 0.22
RTCB-202ENST00000463455 RGPD2P0DJD1 1756 aa16.41■□□□□ 0.22
RTCB-202ENST00000463455 MEGF6O75095 1541 aa16.4■□□□□ 0.22
RTCB-202ENST00000463455 ABCB7O75027 752 aa16.4■□□□□ 0.22
RTCB-202ENST00000463455 NBPF6Q5VWK0 638 aa16.4■□□□□ 0.22
RTCB-202ENST00000463455 PROM2Q8N271 834 aa16.4■□□□□ 0.22
RTCB-202ENST00000463455 ZCRB1Q8TBF4 217 aaKnown RBP16.4■□□□□ 0.22
RTCB-202ENST00000463455 NBPF4Q96M43 638 aa16.4■□□□□ 0.22
RTCB-202ENST00000463455 NCAPD2Q15021 1401 aa16.39■□□□□ 0.21
RTCB-202ENST00000463455 KCNQ2O43526 872 aa16.39■□□□□ 0.21
RTCB-202ENST00000463455 FKBP8Q14318 412 aa16.39■□□□□ 0.21
RTCB-202ENST00000463455 TXNRD1Q16881 649 aa16.39■□□□□ 0.21
RTCB-202ENST00000463455 HSP90AB2PQ58FF8 381 aa16.39■□□□□ 0.21
RTCB-202ENST00000463455 RAPGEF4Q8WZA2 1011 aa16.39■□□□□ 0.21
RTCB-202ENST00000463455 BTAF1O14981 1849 aa16.39■□□□□ 0.21
RTCB-202ENST00000463455 WASHC2AQ641Q2 1341 aa16.39■□□□□ 0.21
RTCB-202ENST00000463455 SHANK3Q9BYB0 1731 aa16.39■□□□□ 0.21
RTCB-202ENST00000463455 PLEKHG2Q9H7P9 1386 aa16.38■□□□□ 0.21
RTCB-202ENST00000463455 ACSBG1Q96GR2 724 aa16.38■□□□□ 0.21
RTCB-202ENST00000463455 TATP17735 454 aaPredicted RBP16.37■□□□□ 0.21
RTCB-202ENST00000463455 DDX54Q8TDD1 881 aaKnown RBP16.37■□□□□ 0.21
RTCB-202ENST00000463455 ANO8Q9HCE9 1232 aaPredicted RBP16.37■□□□□ 0.21
RTCB-202ENST00000463455 EMILIN1Q9Y6C2 1016 aa16.37■□□□□ 0.21
RTCB-202ENST00000463455 MAP2P11137 1827 aaKnown RBP16.37■□□□□ 0.21
RTCB-202ENST00000463455 KAT6BQ8WYB5 2073 aa16.36■□□□□ 0.21
RTCB-202ENST00000463455 POLR3GLQ9BT43 218 aa16.36■□□□□ 0.21
RTCB-202ENST00000463455 CASZ1Q86V15 1759 aa16.36■□□□□ 0.21
RTCB-202ENST00000463455 SLC27A3Q5K4L6 730 aa16.35■□□□□ 0.21
RTCB-202ENST00000463455 PANK3Q9H999 370 aa16.35■□□□□ 0.21
RTCB-202ENST00000463455 SPON1Q9HCB6 807 aa16.35■□□□□ 0.21
RTCB-202ENST00000463455 STK32BQ9NY57 414 aa16.35■□□□□ 0.21
RTCB-202ENST00000463455 PCDH11XQ9BZA7 1347 aa16.35■□□□□ 0.21
RTCB-202ENST00000463455 PCDH11YQ9BZA8 1340 aa16.35■□□□□ 0.21
RTCB-202ENST00000463455 PAPPAQ13219 1627 aa16.34■□□□□ 0.21
RTCB-202ENST00000463455 DOT1LQ8TEK3 1739 aa16.34■□□□□ 0.21
RTCB-202ENST00000463455 SLC15A2Q16348 729 aa16.34■□□□□ 0.21
RTCB-202ENST00000463455 POLKQ9UBT6 870 aa16.34■□□□□ 0.21
RTCB-202ENST00000463455 PKD1L3Q7Z443 1732 aa16.33■□□□□ 0.21
RTCB-202ENST00000463455 HMGB2P26583 209 aaKnown RBP16.33■□□□□ 0.2
RTCB-202ENST00000463455 MKRN4PQ13434 485 aaPredicted RBP16.32■□□□□ 0.2
RTCB-202ENST00000463455 USHBP1Q8N6Y0 703 aa16.32■□□□□ 0.2
RTCB-202ENST00000463455 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.32■□□□□ 0.22e-6■□□□□ 10.3
RTCB-202ENST00000463455 PPM1GO15355 546 aaPredicted RBP16.31■□□□□ 0.2
RTCB-202ENST00000463455 KNSTRNQ9Y448 316 aa16.31■□□□□ 0.2
RTCB-202ENST00000463455 PRIM1P49642 420 aaKnown RBP16.3■□□□□ 0.2
RTCB-202ENST00000463455 CACNB1Q02641 598 aaPredicted RBP16.3■□□□□ 0.2
RTCB-202ENST00000463455 LY75O60449 1722 aa16.3■□□□□ 0.2
RTCB-202ENST00000463455 KIF7Q2M1P5 1343 aa16.29■□□□□ 0.2
RTCB-202ENST00000463455 SYTL4Q96C24 671 aaPredicted RBP16.29■□□□□ 0.2
RTCB-202ENST00000463455 QSER1Q2KHR3 1735 aa16.28■□□□□ 0.2
RTCB-202ENST00000463455 EYA1Q99502 592 aa16.28■□□□□ 0.2
RTCB-202ENST00000463455 SPG7Q9UQ90 795 aa16.28■□□□□ 0.2
RTCB-202ENST00000463455 CYP27B1O15528 508 aa16.27■□□□□ 0.2
RTCB-202ENST00000463455 DSG3P32926 999 aa16.27■□□□□ 0.2
RTCB-202ENST00000463455 EIF4A2Q14240 407 aaKnown RBP16.27■□□□□ 0.2
RTCB-202ENST00000463455 NKX1-1Q15270 411 aaPredicted RBP16.27■□□□□ 0.2
RTCB-202ENST00000463455 MORC1Q86VD1 984 aa16.27■□□□□ 0.2
RTCB-202ENST00000463455 LRRC4BQ9NT99 713 aa16.27■□□□□ 0.2
RTCB-202ENST00000463455 IGSF1Q8N6C5 1336 aa16.26■□□□□ 0.19
RTCB-202ENST00000463455 MTFR1LQ9H019 292 aa16.26■□□□□ 0.19
RTCB-202ENST00000463455 PPP1R1BQ9UD71 204 aaPredicted RBP16.26■□□□□ 0.19
RTCB-202ENST00000463455 TNNT2P45379 298 aaPredicted RBP16.25■□□□□ 0.19
RTCB-202ENST00000463455 AMER1Q5JTC6 1135 aaPredicted RBP16.25■□□□□ 0.19
RTCB-202ENST00000463455 AKT1S1Q96B36 256 aa16.25■□□□□ 0.19
RTCB-202ENST00000463455 SLC16A10Q8TF71 515 aa16.24■□□□□ 0.19
RTCB-202ENST00000463455 ZNF827Q17R98 1081 aa16.23■□□□□ 0.19
RTCB-202ENST00000463455 SMARCC1Q92922 1105 aaPredicted RBP16.23■□□□□ 0.19
RTCB-202ENST00000463455 NPC1L1Q9UHC9 1359 aa16.23■□□□□ 0.19
RTCB-202ENST00000463455 TOGARAM1Q9Y4F4 1720 aa16.22■□□□□ 0.19
RTCB-202ENST00000463455 ZBTB7AO95365 584 aa16.22■□□□□ 0.19
RTCB-202ENST00000463455 PTGER2P43116 358 aa16.22■□□□□ 0.19
RTCB-202ENST00000463455 IFNL2Q8IZJ0 200 aa16.22■□□□□ 0.19
RTCB-202ENST00000463455 PDGFDQ9GZP0 370 aaPredicted RBP16.22■□□□□ 0.19
RTCB-202ENST00000463455 CCNL1Q9UK58 526 aaPredicted RBP16.22■□□□□ 0.19
RTCB-202ENST00000463455 ITGB4P16144 1822 aa16.22■□□□□ 0.19
RTCB-202ENST00000463455 PER1O15534 1290 aaPredicted RBP16.21■□□□□ 0.19
RTCB-202ENST00000463455 PALLDQ8WX93 1383 aa16.21■□□□□ 0.19
RTCB-202ENST00000463455 PHKG2P15735 406 aa16.2■□□□□ 0.18
RTCB-202ENST00000463455 SGIP1Q9BQI5 828 aa16.2■□□□□ 0.18
RTCB-202ENST00000463455 KDRP35968 1356 aa16.19■□□□□ 0.18
RTCB-202ENST00000463455 HSP90AB1P08238 724 aaKnown RBP16.19■□□□□ 0.18
RTCB-202ENST00000463455 AMOTQ4VCS5 1084 aa16.19■□□□□ 0.18
RTCB-202ENST00000463455 MPRIPQ6WCQ1 1025 aa16.19■□□□□ 0.18
RTCB-202ENST00000463455 COL24A1Q17RW2 1714 aa16.19■□□□□ 0.18
RTCB-202ENST00000463455 PNPLA7Q6ZV29 1317 aa16.19■□□□□ 0.18
RTCB-202ENST00000463455 C5P01031 1676 aa16.18■□□□□ 0.18
RTCB-202ENST00000463455 MAP3K5Q99683 1374 aa16.18■□□□□ 0.18
RTCB-202ENST00000463455 PLEKHO1Q53GL0 409 aaPredicted RBP16.18■□□□□ 0.18
RTCB-202ENST00000463455 TFCP2L1Q9NZI6 479 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms