RNA–Protein interactions for RNA: ENST00000463230.5

R3HDM1-213, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 2,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-213ENST00000463230 PKD1L3Q7Z443 1732 aa17.75■□□□□ 0.43
R3HDM1-213ENST00000463230 EIF4A2Q14240 407 aaKnown RBP17.74■□□□□ 0.43
R3HDM1-213ENST00000463230 ZCRB1Q8TBF4 217 aaKnown RBP17.74■□□□□ 0.43
R3HDM1-213ENST00000463230 DEFB132Q7Z7B7 95 aa17.73■□□□□ 0.43
R3HDM1-213ENST00000463230 IGSF1Q8N6C5 1336 aa17.73■□□□□ 0.43
R3HDM1-213ENST00000463230 CC2D1BQ5T0F9 858 aaKnown RBP17.72■□□□□ 0.43
R3HDM1-213ENST00000463230 EYA1Q99502 592 aa17.72■□□□□ 0.43
R3HDM1-213ENST00000463230 APBA3O96018 575 aa17.72■□□□□ 0.43
R3HDM1-213ENST00000463230 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.72■□□□□ 0.432e-6■■□□□ 14.5
R3HDM1-213ENST00000463230 RREB1Q92766 1687 aa17.72■□□□□ 0.43
R3HDM1-213ENST00000463230 NPM3O75607 178 aaKnown RBP17.71■□□□□ 0.43
R3HDM1-213ENST00000463230 USHBP1Q8N6Y0 703 aa17.71■□□□□ 0.43
R3HDM1-213ENST00000463230 CAMKK2Q96RR4 588 aa17.71■□□□□ 0.43
R3HDM1-213ENST00000463230 PCDH11XQ9BZA7 1347 aa17.71■□□□□ 0.42
R3HDM1-213ENST00000463230 PCDH11YQ9BZA8 1340 aa17.71■□□□□ 0.42
R3HDM1-213ENST00000463230 PLSCR1O15162 318 aa17.7■□□□□ 0.42
R3HDM1-213ENST00000463230 EN1Q05925 392 aaPredicted RBP17.69■□□□□ 0.42
R3HDM1-213ENST00000463230 MTHFSP49914 203 aa17.68■□□□□ 0.42
R3HDM1-213ENST00000463230 SPG7Q9UQ90 795 aa17.68■□□□□ 0.42
R3HDM1-213ENST00000463230 DDX54Q8TDD1 881 aaKnown RBP17.68■□□□□ 0.42
R3HDM1-213ENST00000463230 IL13P35225 146 aa17.67■□□□□ 0.42
R3HDM1-213ENST00000463230 KDRP35968 1356 aa17.66■□□□□ 0.42
R3HDM1-213ENST00000463230 NUP188Q5SRE5 1749 aa17.66■□□□□ 0.42
R3HDM1-213ENST00000463230 DOT1LQ8TEK3 1739 aa17.66■□□□□ 0.42
R3HDM1-213ENST00000463230 BTAF1O14981 1849 aa17.65■□□□□ 0.42
R3HDM1-213ENST00000463230 EZH2Q15910 746 aaKnown RBP17.65■□□□□ 0.42
R3HDM1-213ENST00000463230 COL3A1P02461 1466 aaPredicted RBP17.65■□□□□ 0.42
R3HDM1-213ENST00000463230 NKX1-1Q15270 411 aaPredicted RBP17.63■□□□□ 0.41
R3HDM1-213ENST00000463230 DIAPH1O60610 1272 aaKnown RBP17.63■□□□□ 0.41
R3HDM1-213ENST00000463230 AMOTQ4VCS5 1084 aa17.63■□□□□ 0.41
R3HDM1-213ENST00000463230 CFAP53Q96M91 514 aa17.63■□□□□ 0.41
R3HDM1-213ENST00000463230 CYP27B1O15528 508 aa17.62■□□□□ 0.41
R3HDM1-213ENST00000463230 PLEKHO1Q53GL0 409 aaPredicted RBP17.62■□□□□ 0.41
R3HDM1-213ENST00000463230 ACSBG1Q96GR2 724 aa17.62■□□□□ 0.41
R3HDM1-213ENST00000463230 KCNQ2O43526 872 aa17.61■□□□□ 0.41
R3HDM1-213ENST00000463230 PTF1AQ7RTS3 328 aa17.6■□□□□ 0.41
R3HDM1-213ENST00000463230 KAT6BQ8WYB5 2073 aa17.6■□□□□ 0.41
R3HDM1-213ENST00000463230 PPP2R1AP30153 589 aa17.6■□□□□ 0.41
R3HDM1-213ENST00000463230 NBPF14Q5TI25 921 aa17.6■□□□□ 0.41
R3HDM1-213ENST00000463230 IFNL2Q8IZJ0 200 aa17.6■□□□□ 0.41
R3HDM1-213ENST00000463230 HSP90AB1P08238 724 aaKnown RBP17.59■□□□□ 0.41
R3HDM1-213ENST00000463230 NCBP3Q53F19 620 aaKnown RBP17.59■□□□□ 0.41
R3HDM1-213ENST00000463230 SULT6B1Q6IMI4 303 aa17.59■□□□□ 0.41
R3HDM1-213ENST00000463230 TOGARAM1Q9Y4F4 1720 aa17.58■□□□□ 0.41
R3HDM1-213ENST00000463230 PHKG2P15735 406 aa17.58■□□□□ 0.4
R3HDM1-213ENST00000463230 HMGB2P26583 209 aaKnown RBP17.58■□□□□ 0.4
R3HDM1-213ENST00000463230 PRIM1P49642 420 aaKnown RBP17.58■□□□□ 0.4
R3HDM1-213ENST00000463230 PIAS4Q8N2W9 510 aaPredicted RBP17.57■□□□□ 0.4
R3HDM1-213ENST00000463230 ITGB4P16144 1822 aa17.57■□□□□ 0.4
R3HDM1-213ENST00000463230 RALBP1Q15311 655 aa17.57■□□□□ 0.4
R3HDM1-213ENST00000463230 AEBP1Q8IUX7 1158 aa17.57■□□□□ 0.4
R3HDM1-213ENST00000463230 LY75O60449 1722 aa17.57■□□□□ 0.4
R3HDM1-213ENST00000463230 TXNRD1Q16881 649 aa17.56■□□□□ 0.4
R3HDM1-213ENST00000463230 SLC27A3Q5K4L6 730 aa17.56■□□□□ 0.4
R3HDM1-213ENST00000463230 NUDCQ9Y266 331 aa17.56■□□□□ 0.4
R3HDM1-213ENST00000463230 DDX10Q13206 875 aaKnown RBP17.55■□□□□ 0.4
R3HDM1-213ENST00000463230 CNGB1Q14028 1251 aaPredicted RBP17.55■□□□□ 0.4
R3HDM1-213ENST00000463230 PROM2Q8N271 834 aa17.55■□□□□ 0.4
R3HDM1-213ENST00000463230 SYTL4Q96C24 671 aaPredicted RBP17.55■□□□□ 0.4
R3HDM1-213ENST00000463230 PAPPAQ13219 1627 aa17.54■□□□□ 0.4
R3HDM1-213ENST00000463230 ZNF530Q6P9A1 599 aaPredicted RBP17.54■□□□□ 0.4
R3HDM1-213ENST00000463230 DCAF5Q96JK2 942 aa17.54■□□□□ 0.4
R3HDM1-213ENST00000463230 C1orf141Q5JVX7 400 aa17.53■□□□□ 0.4
R3HDM1-213ENST00000463230 SMARCC1Q92922 1105 aaPredicted RBP17.53■□□□□ 0.4
R3HDM1-213ENST00000463230 ERVV-2B6SEH9 535 aa17.52■□□□□ 0.4
R3HDM1-213ENST00000463230 LRP5O75197 1615 aa17.52■□□□□ 0.39
R3HDM1-213ENST00000463230 U2SURPO15042 1029 aaKnown RBP17.5■□□□□ 0.39
R3HDM1-213ENST00000463230 HMOX1P09601 288 aa17.5■□□□□ 0.39
R3HDM1-213ENST00000463230 R3HDM1Q15032 1099 aaKnown RBP17.5■□□□□ 0.39
R3HDM1-213ENST00000463230 AKAP4Q5JQC9 854 aa17.5■□□□□ 0.39
R3HDM1-213ENST00000463230 STK32BQ9NY57 414 aa17.5■□□□□ 0.39
R3HDM1-213ENST00000463230 TMOD3Q9NYL9 352 aa17.5■□□□□ 0.39
R3HDM1-213ENST00000463230 SCN11AQ9UI33 1791 aa17.5■□□□□ 0.39
R3HDM1-213ENST00000463230 QSER1Q2KHR3 1735 aa17.49■□□□□ 0.39
R3HDM1-213ENST00000463230 KDM6AO15550 1401 aaPredicted RBP17.49■□□□□ 0.39
R3HDM1-213ENST00000463230 ADAMTS7Q9UKP4 1686 aa17.49■□□□□ 0.39
R3HDM1-213ENST00000463230 MPRIPQ6WCQ1 1025 aa17.48■□□□□ 0.39
R3HDM1-213ENST00000463230 PSDA5PKW4 1024 aaPredicted RBP17.48■□□□□ 0.39
R3HDM1-213ENST00000463230 ZNF316A6NFI3 1004 aaPredicted RBP17.48■□□□□ 0.39
R3HDM1-213ENST00000463230 PIGBQ92521 554 aa17.48■□□□□ 0.39
R3HDM1-213ENST00000463230 PALLDQ8WX93 1383 aa17.48■□□□□ 0.39
R3HDM1-213ENST00000463230 MYBBP1AQ9BQG0 1328 aaKnown RBP17.47■□□□□ 0.39
R3HDM1-213ENST00000463230 ZNF831Q5JPB2 1677 aa17.47■□□□□ 0.39
R3HDM1-213ENST00000463230 GAS2L2Q8NHY3 880 aa17.47■□□□□ 0.39
R3HDM1-213ENST00000463230 FCHSD2O94868 740 aa17.47■□□□□ 0.39
R3HDM1-213ENST00000463230 ANO8Q9HCE9 1232 aaPredicted RBP17.47■□□□□ 0.39
R3HDM1-213ENST00000463230 MRC1P22897 1456 aa17.47■□□□□ 0.39
R3HDM1-213ENST00000463230 CASZ1Q86V15 1759 aa17.46■□□□□ 0.39
R3HDM1-213ENST00000463230 SLC15A2Q16348 729 aa17.46■□□□□ 0.39
R3HDM1-213ENST00000463230 RSPH6AQ9H0K4 717 aa17.46■□□□□ 0.39
R3HDM1-213ENST00000463230 LRRC4BQ9NT99 713 aa17.45■□□□□ 0.38
R3HDM1-213ENST00000463230 CCNL1Q9UK58 526 aaPredicted RBP17.45■□□□□ 0.38
R3HDM1-213ENST00000463230 U2AF1L5P0DN76 240 aaPredicted RBP17.45■□□□□ 0.38
R3HDM1-213ENST00000463230 U2AF1Q01081 240 aaKnown RBP eCLIP17.45■□□□□ 0.38
R3HDM1-213ENST00000463230 C5P01031 1676 aa17.45■□□□□ 0.38
R3HDM1-213ENST00000463230 VIRMAQ69YN4 1812 aaKnown RBP17.45■□□□□ 0.38
R3HDM1-213ENST00000463230 MTHFSDQ2M296 383 aaKnown RBP17.44■□□□□ 0.38
R3HDM1-213ENST00000463230 TAF1LQ8IZX4 1826 aa17.44■□□□□ 0.38
R3HDM1-213ENST00000463230 CABP4P57796 275 aa17.44■□□□□ 0.38
R3HDM1-213ENST00000463230 AKT1S1Q96B36 256 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms