RNA–Protein interactions for RNA: ENST00000463197.1

CCR9-205, Transcript of C-C motif chemokine receptor 9, humanhuman

TSL 4

Gene CCR9, Length 349 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-205ENST00000463197 RGPD4Q7Z3J3 1758 aa7.97□□□□□ -1.13
CCR9-205ENST00000463197 CYP27B1O15528 508 aa7.97□□□□□ -1.13
CCR9-205ENST00000463197 YY1P25490 414 aa7.97□□□□□ -1.13
CCR9-205ENST00000463197 MTFR1LQ9H019 292 aa7.97□□□□□ -1.13
CCR9-205ENST00000463197 NHSQ6T4R5 1651 aa7.97□□□□□ -1.13
CCR9-205ENST00000463197 NINLQ9Y2I6 1382 aa7.97□□□□□ -1.13
CCR9-205ENST00000463197 COL23A1Q86Y22 540 aaPredicted RBP7.96□□□□□ -1.14
CCR9-205ENST00000463197 SYTL4Q96C24 671 aaPredicted RBP7.96□□□□□ -1.14
CCR9-205ENST00000463197 MYOM1P52179 1685 aa7.95□□□□□ -1.14
CCR9-205ENST00000463197 ARXQ96QS3 562 aa7.95□□□□□ -1.14
CCR9-205ENST00000463197 PCGF6Q9BYE7 350 aa7.95□□□□□ -1.14
CCR9-205ENST00000463197 POLKQ9UBT6 870 aa7.95□□□□□ -1.14
CCR9-205ENST00000463197 INSRP06213 1382 aa7.95□□□□□ -1.14
CCR9-205ENST00000463197 SHANK3Q9BYB0 1731 aa7.95□□□□□ -1.14
CCR9-205ENST00000463197 RGPD2P0DJD1 1756 aa7.94□□□□□ -1.14
CCR9-205ENST00000463197 SLC27A3Q5K4L6 730 aa7.94□□□□□ -1.14
CCR9-205ENST00000463197 NLGN2Q8NFZ4 835 aa7.94□□□□□ -1.14
CCR9-205ENST00000463197 EYA1Q99502 592 aa7.94□□□□□ -1.14
CCR9-205ENST00000463197 BTAF1O14981 1849 aa7.94□□□□□ -1.14
CCR9-205ENST00000463197 NSD3Q9BZ95 1437 aa7.94□□□□□ -1.14
CCR9-205ENST00000463197 SLC24A1O60721 1099 aa7.93□□□□□ -1.14
CCR9-205ENST00000463197 PIGBQ92521 554 aa7.93□□□□□ -1.14
CCR9-205ENST00000463197 WASHC2AQ641Q2 1341 aa7.93□□□□□ -1.14
CCR9-205ENST00000463197 RTL1A6NKG5 1358 aa7.93□□□□□ -1.14
CCR9-205ENST00000463197 PPM1GO15355 546 aaPredicted RBP7.92□□□□□ -1.14
CCR9-205ENST00000463197 HSPA5P11021 654 aaKnown RBP7.92□□□□□ -1.14
CCR9-205ENST00000463197 TATP17735 454 aaPredicted RBP7.92□□□□□ -1.14
CCR9-205ENST00000463197 NKX1-1Q15270 411 aaPredicted RBP7.92□□□□□ -1.14
CCR9-205ENST00000463197 MPRIPQ6WCQ1 1025 aa7.92□□□□□ -1.14
CCR9-205ENST00000463197 ZNF784Q8NCA9 323 aaPredicted RBP7.92□□□□□ -1.14
CCR9-205ENST00000463197 TFCP2L1Q9NZI6 479 aa7.92□□□□□ -1.14
CCR9-205ENST00000463197 CCNL1Q9UK58 526 aaPredicted RBP7.92□□□□□ -1.14
CCR9-205ENST00000463197 TIMELESSQ9UNS1 1208 aa7.92□□□□□ -1.14
CCR9-205ENST00000463197 NCAPD2Q15021 1401 aa7.92□□□□□ -1.14
CCR9-205ENST00000463197 TNNT2P45379 298 aaPredicted RBP7.91□□□□□ -1.14
CCR9-205ENST00000463197 EIF4A2Q14240 407 aaKnown RBP7.91□□□□□ -1.14
CCR9-205ENST00000463197 SLC16A10Q8TF71 515 aa7.91□□□□□ -1.14
CCR9-205ENST00000463197 RAPGEF4Q8WZA2 1011 aa7.91□□□□□ -1.14
CCR9-205ENST00000463197 SLC4A9Q96Q91 983 aa7.91□□□□□ -1.14
CCR9-205ENST00000463197 PANK3Q9H999 370 aa7.91□□□□□ -1.14
CCR9-205ENST00000463197 FLT4P35916 1363 aa7.91□□□□□ -1.14
CCR9-205ENST00000463197 MAP3K5Q99683 1374 aa7.9□□□□□ -1.14
CCR9-205ENST00000463197 CGNL1Q0VF96 1302 aa7.9□□□□□ -1.14
CCR9-205ENST00000463197 YBX3P16989 372 aaKnown RBP eCLIP7.9□□□□□ -1.14
CCR9-205ENST00000463197 ITPK1Q13572 414 aa7.9□□□□□ -1.14
CCR9-205ENST00000463197 MSL1Q68DK7 614 aa7.9□□□□□ -1.14
CCR9-205ENST00000463197 LINC00116Q8NCU8 138 aa7.9□□□□□ -1.14
CCR9-205ENST00000463197 ASAP1Q9ULH1 1129 aa7.9□□□□□ -1.14
CCR9-205ENST00000463197 KIF24Q5T7B8 1368 aa7.89□□□□□ -1.15
CCR9-205ENST00000463197 PHKG2P15735 406 aa7.89□□□□□ -1.15
CCR9-205ENST00000463197 CDCA8Q53HL2 280 aa7.89□□□□□ -1.15
CCR9-205ENST00000463197 POLR3GLQ9BT43 218 aa7.89□□□□□ -1.15
CCR9-205ENST00000463197 ATG3Q9NT62 314 aa7.89□□□□□ -1.15
CCR9-205ENST00000463197 LY75O60449 1722 aa7.89□□□□□ -1.15
CCR9-205ENST00000463197 DOT1LQ8TEK3 1739 aa7.89□□□□□ -1.15
CCR9-205ENST00000463197 PALLDQ8WX93 1383 aa7.88□□□□□ -1.15
CCR9-205ENST00000463197 PCDH11XQ9BZA7 1347 aa7.88□□□□□ -1.15
CCR9-205ENST00000463197 PCDH11YQ9BZA8 1340 aa7.88□□□□□ -1.15
CCR9-205ENST00000463197 COL24A1Q17RW2 1714 aa7.88□□□□□ -1.15
CCR9-205ENST00000463197 TOGARAM1Q9Y4F4 1720 aa7.87□□□□□ -1.15
CCR9-205ENST00000463197 AEBP1Q8IUX7 1158 aa7.87□□□□□ -1.15
CCR9-205ENST00000463197 KLHL34Q8N239 644 aa7.87□□□□□ -1.15
CCR9-205ENST00000463197 CLSPNQ9HAW4 1339 aa7.86□□□□□ -1.15
CCR9-205ENST00000463197 LOC102724428A0A0B4J2F2 783 aa7.86□□□□□ -1.15
CCR9-205ENST00000463197 MSH5O43196 834 aa7.86□□□□□ -1.15
CCR9-205ENST00000463197 POLD1P28340 1107 aa7.86□□□□□ -1.15
CCR9-205ENST00000463197 SIK1P57059 783 aa7.86□□□□□ -1.15
CCR9-205ENST00000463197 EIF4G2P78344 907 aaKnown RBP eCLIP7.86□□□□□ -1.15
CCR9-205ENST00000463197 GPR162Q16538 588 aa7.86□□□□□ -1.15
CCR9-205ENST00000463197 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.86□□□□□ -1.15
CCR9-205ENST00000463197 SPG7Q9UQ90 795 aa7.86□□□□□ -1.15
CCR9-205ENST00000463197 TUBGCP6Q96RT7 1819 aa7.86□□□□□ -1.15
CCR9-205ENST00000463197 SMG6Q86US8 1419 aaKnown RBP7.86□□□□□ -1.15
CCR9-205ENST00000463197 IGSF1Q8N6C5 1336 aa7.85□□□□□ -1.15
CCR9-205ENST00000463197 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.85□□□□□ -1.15
CCR9-205ENST00000463197 DCAF8L1A6NGE4 600 aa7.85□□□□□ -1.15
CCR9-205ENST00000463197 PER1O15534 1290 aaPredicted RBP7.85□□□□□ -1.15
CCR9-205ENST00000463197 PHF14O94880 888 aa7.85□□□□□ -1.15
CCR9-205ENST00000463197 IL13P35225 146 aa7.85□□□□□ -1.15
CCR9-205ENST00000463197 AMER1Q5JTC6 1135 aaPredicted RBP7.85□□□□□ -1.15
CCR9-205ENST00000463197 IFNL2Q8IZJ0 200 aa7.85□□□□□ -1.15
CCR9-205ENST00000463197 WWC3Q9ULE0 1092 aa7.85□□□□□ -1.15
CCR9-205ENST00000463197 CEP350Q5VT06 3117 aa7.84□□□□□ -1.15
CCR9-205ENST00000463197 ATP6V1AP38606 617 aa7.84□□□□□ -1.15
CCR9-205ENST00000463197 PELP1Q8IZL8 1130 aaKnown RBP7.84□□□□□ -1.15
CCR9-205ENST00000463197 KIF20BQ96Q89 1820 aa7.84□□□□□ -1.15
CCR9-205ENST00000463197 KDM6AO15550 1401 aaPredicted RBP7.84□□□□□ -1.15
CCR9-205ENST00000463197 QSER1Q2KHR3 1735 aa7.83□□□□□ -1.16
CCR9-205ENST00000463197 ANKRD26Q9UPS8 1709 aa7.83□□□□□ -1.16
CCR9-205ENST00000463197 MAP2P11137 1827 aaKnown RBP7.83□□□□□ -1.16
CCR9-205ENST00000463197 SMARCC1Q92922 1105 aaPredicted RBP7.83□□□□□ -1.16
CCR9-205ENST00000463197 LGR6Q9HBX8 967 aa7.83□□□□□ -1.16
CCR9-205ENST00000463197 TMOD3Q9NYL9 352 aa7.83□□□□□ -1.16
CCR9-205ENST00000463197 CD2APQ9Y5K6 639 aa7.83□□□□□ -1.16
CCR9-205ENST00000463197 PKD1L3Q7Z443 1732 aa7.83□□□□□ -1.16
CCR9-205ENST00000463197 KDRP35968 1356 aa7.83□□□□□ -1.16
CCR9-205ENST00000463197 KIF7Q2M1P5 1343 aa7.82□□□□□ -1.16
CCR9-205ENST00000463197 ERVV-2B6SEH9 535 aa7.82□□□□□ -1.16
CCR9-205ENST00000463197 C4BP0C0L5 1744 aa7.82□□□□□ -1.16
CCR9-205ENST00000463197 C1QTNF8P60827 252 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms