RNA–Protein interactions for RNA: ENST00000462539.1

SREBF2-204, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 2

Gene SREBF2, Length 796 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-204ENST00000462539 FBXO41Q8TF61 875 aa9.21□□□□□ -0.94
SREBF2-204ENST00000462539 GBP4Q96PP9 640 aa9.21□□□□□ -0.94
SREBF2-204ENST00000462539 PANK2Q9BZ23 570 aa9.21□□□□□ -0.94
SREBF2-204ENST00000462539 GZF1Q9H116 711 aaPredicted RBP9.21□□□□□ -0.94
SREBF2-204ENST00000462539 MSH6P52701 1360 aa9.21□□□□□ -0.94
SREBF2-204ENST00000462539 KIAA0232Q92628 1395 aa9.21□□□□□ -0.94
SREBF2-204ENST00000462539 PIK3C2AO00443 1686 aa9.2□□□□□ -0.94
SREBF2-204ENST00000462539 RGPD8O14715 1765 aaPredicted RBP9.2□□□□□ -0.94
SREBF2-204ENST00000462539 EIF5BO60841 1220 aaKnown RBP9.2□□□□□ -0.94
SREBF2-204ENST00000462539 GSPT1P15170 499 aaKnown RBP9.2□□□□□ -0.94
SREBF2-204ENST00000462539 TTC22Q5TAA0 569 aa9.2□□□□□ -0.94
SREBF2-204ENST00000462539 INTS3Q68E01 1043 aaKnown RBP9.2□□□□□ -0.94
SREBF2-204ENST00000462539 SIRT1Q96EB6 747 aa9.2□□□□□ -0.94
SREBF2-204ENST00000462539 COG3Q96JB2 828 aa9.2□□□□□ -0.94
SREBF2-204ENST00000462539 PRR36Q9H6K5 1346 aa9.2□□□□□ -0.94
SREBF2-204ENST00000462539 PLEKHM2Q8IWE5 1019 aa9.19□□□□□ -0.94
SREBF2-204ENST00000462539 ANKRD44Q8N8A2 993 aa9.19□□□□□ -0.94
SREBF2-204ENST00000462539 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.19□□□□□ -0.94
SREBF2-204ENST00000462539 NUDT16Q96DE0 195 aaKnown RBP9.19□□□□□ -0.94
SREBF2-204ENST00000462539 ARXQ96QS3 562 aa9.19□□□□□ -0.94
SREBF2-204ENST00000462539 GRPEL1Q9HAV7 217 aa9.19□□□□□ -0.94
SREBF2-204ENST00000462539 CRB1P82279 1406 aa9.19□□□□□ -0.94
SREBF2-204ENST00000462539 ADAMTS13Q76LX8 1427 aa9.19□□□□□ -0.94
SREBF2-204ENST00000462539 FAM83GA6ND36 823 aa9.18□□□□□ -0.94
SREBF2-204ENST00000462539 RTL1A6NKG5 1358 aa9.18□□□□□ -0.94
SREBF2-204ENST00000462539 ELL2O00472 640 aaPredicted RBP9.18□□□□□ -0.94
SREBF2-204ENST00000462539 ARHGEF10O15013 1369 aa9.18□□□□□ -0.94
SREBF2-204ENST00000462539 USP6P35125 1406 aa9.18□□□□□ -0.94
SREBF2-204ENST00000462539 RRS1Q15050 365 aaKnown RBP9.18□□□□□ -0.94
SREBF2-204ENST00000462539 SKOR2Q2VWA4 1001 aaPredicted RBP9.18□□□□□ -0.94
SREBF2-204ENST00000462539 CLEC17AQ6ZS10 378 aa9.18□□□□□ -0.94
SREBF2-204ENST00000462539 USP31Q70CQ4 1352 aa9.18□□□□□ -0.94
SREBF2-204ENST00000462539 GAS2L2Q8NHY3 880 aa9.18□□□□□ -0.94
SREBF2-204ENST00000462539 DCTPP1Q9H773 170 aa9.18□□□□□ -0.94
SREBF2-204ENST00000462539 LMTK3Q96Q04 1460 aa9.17□□□□□ -0.94
SREBF2-204ENST00000462539 ROBO2Q9HCK4 1378 aa9.17□□□□□ -0.94
SREBF2-204ENST00000462539 IBTKQ9P2D0 1353 aaPredicted RBP9.17□□□□□ -0.94
SREBF2-204ENST00000462539 NCKAP5LQ9HCH0 1330 aa9.17□□□□□ -0.94
SREBF2-204ENST00000462539 SSFA2P28290 1259 aa9.17□□□□□ -0.94
SREBF2-204ENST00000462539 DCTN1Q14203 1278 aa9.17□□□□□ -0.94
SREBF2-204ENST00000462539 EIF4A2Q14240 407 aaKnown RBP9.17□□□□□ -0.94
SREBF2-204ENST00000462539 RABEP1Q15276 862 aa9.17□□□□□ -0.94
SREBF2-204ENST00000462539 RBM42Q9BTD8 480 aaKnown RBP9.17□□□□□ -0.94
SREBF2-204ENST00000462539 DIP2AQ14689 1571 aa9.16□□□□□ -0.94
SREBF2-204ENST00000462539 SSH2Q76I76 1423 aa9.16□□□□□ -0.94
SREBF2-204ENST00000462539 TNRQ92752 1358 aa9.16□□□□□ -0.94
SREBF2-204ENST00000462539 PTPRCP08575 1304 aa9.16□□□□□ -0.94
SREBF2-204ENST00000462539 CHL1O00533 1208 aa9.16□□□□□ -0.94
SREBF2-204ENST00000462539 CLCN1P35523 988 aa9.16□□□□□ -0.94
SREBF2-204ENST00000462539 CEP85Q6P2H3 762 aa9.16□□□□□ -0.94
SREBF2-204ENST00000462539 AEBP1Q8IUX7 1158 aa9.16□□□□□ -0.94
SREBF2-204ENST00000462539 CCDC61Q9Y6R9 512 aa9.16□□□□□ -0.94
SREBF2-204ENST00000462539 CRYBG1Q9Y4K1 1723 aa9.16□□□□□ -0.94
SREBF2-204ENST00000462539 CEP170BQ9Y4F5 1589 aaPredicted RBP9.16□□□□□ -0.94
SREBF2-204ENST00000462539 TTC21BQ7Z4L5 1316 aa9.15□□□□□ -0.94
SREBF2-204ENST00000462539 PRKCSHP14314 528 aaPredicted RBP9.15□□□□□ -0.94
SREBF2-204ENST00000462539 HAP1P54257 671 aaPredicted RBP9.15□□□□□ -0.94
SREBF2-204ENST00000462539 TXNDC2Q86VQ3 553 aa9.15□□□□□ -0.94
SREBF2-204ENST00000462539 GAS2L3Q86XJ1 694 aa9.15□□□□□ -0.94
SREBF2-204ENST00000462539 RPAP2Q8IXW5 612 aaPredicted RBP9.15□□□□□ -0.94
SREBF2-204ENST00000462539 PXDNLA1KZ92 1463 aa9.15□□□□□ -0.95
SREBF2-204ENST00000462539 KDM3BQ7LBC6 1761 aa9.14□□□□□ -0.95
SREBF2-204ENST00000462539 TMEM2Q9UHN6 1383 aa9.14□□□□□ -0.95
SREBF2-204ENST00000462539 CYP2E1P05181 493 aaPredicted RBP9.14□□□□□ -0.95
SREBF2-204ENST00000462539 HSP90AA1P07900 732 aaKnown RBP9.14□□□□□ -0.95
SREBF2-204ENST00000462539 FAM69CQ0P6D2 419 aa9.14□□□□□ -0.95
SREBF2-204ENST00000462539 KRT24Q2M2I5 525 aa9.14□□□□□ -0.95
SREBF2-204ENST00000462539 OTUD7AQ8TE49 926 aaPredicted RBP9.14□□□□□ -0.95
SREBF2-204ENST00000462539 USP26Q9BXU7 913 aa9.14□□□□□ -0.95
SREBF2-204ENST00000462539 NWD1Q149M9 1564 aa9.14□□□□□ -0.95
SREBF2-204ENST00000462539 LTN1O94822 1766 aa9.14□□□□□ -0.95
SREBF2-204ENST00000462539 PLEKHG1Q9ULL1 1385 aa9.13□□□□□ -0.95
SREBF2-204ENST00000462539 ERBB4Q15303 1308 aa9.13□□□□□ -0.95
SREBF2-204ENST00000462539 BAG4O95429 457 aaKnown RBP9.13□□□□□ -0.95
SREBF2-204ENST00000462539 ATXN8OSP0DMR3 200 aa9.13□□□□□ -0.95
SREBF2-204ENST00000462539 SULT6B1Q6IMI4 303 aa9.13□□□□□ -0.95
SREBF2-204ENST00000462539 PTPRUQ92729 1446 aa9.13□□□□□ -0.95
SREBF2-204ENST00000462539 KDRP35968 1356 aa9.12□□□□□ -0.95
SREBF2-204ENST00000462539 MED1Q15648 1581 aaPredicted RBP9.12□□□□□ -0.95
SREBF2-204ENST00000462539 PLEKHG3A1L390 1219 aa9.12□□□□□ -0.95
SREBF2-204ENST00000462539 GOLGA6L22H0YM25 854 aa9.12□□□□□ -0.95
SREBF2-204ENST00000462539 SMARCA5O60264 1052 aaPredicted RBP9.12□□□□□ -0.95
SREBF2-204ENST00000462539 SLC4A2P04920 1241 aa9.12□□□□□ -0.95
SREBF2-204ENST00000462539 SDSP20132 328 aa9.12□□□□□ -0.95
SREBF2-204ENST00000462539 KLHL40Q2TBA0 621 aa9.12□□□□□ -0.95
SREBF2-204ENST00000462539 MCM10Q7L590 875 aa9.12□□□□□ -0.95
SREBF2-204ENST00000462539 C16orf71Q8IYS4 520 aaPredicted RBP9.12□□□□□ -0.95
SREBF2-204ENST00000462539 MEIS3Q99687 375 aa9.12□□□□□ -0.95
SREBF2-204ENST00000462539 SBNO1A3KN83 1393 aa9.12□□□□□ -0.95
SREBF2-204ENST00000462539 SLIT1O75093 1534 aa9.11□□□□□ -0.95
SREBF2-204ENST00000462539 ACEP12821 1306 aa9.11□□□□□ -0.95
SREBF2-204ENST00000462539 LMO7Q8WWI1 1683 aa9.11□□□□□ -0.95
SREBF2-204ENST00000462539 ESPNB1AK53 854 aa9.11□□□□□ -0.95
SREBF2-204ENST00000462539 SOCS7O14512 581 aa9.11□□□□□ -0.95
SREBF2-204ENST00000462539 NUCB2P80303 420 aa9.11□□□□□ -0.95
SREBF2-204ENST00000462539 MLECQ14165 292 aa9.11□□□□□ -0.95
SREBF2-204ENST00000462539 CASC1Q6TDU7 716 aa9.11□□□□□ -0.95
SREBF2-204ENST00000462539 FLT4P35916 1363 aa9.11□□□□□ -0.95
SREBF2-204ENST00000462539 MAP3K19Q56UN5 1328 aa9.1□□□□□ -0.95
SREBF2-204ENST00000462539 TTC21AQ8NDW8 1320 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms