RNA–Protein interactions for RNA: ENST00000462473.1

SLC6A1-204, Transcript of solute carrier family 6 member 1, humanhuman

TSL 3

Gene SLC6A1, Length 493 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-204ENST00000462473 PER1O15534 1290 aaPredicted RBP25.77■■□□□ 1.72
SLC6A1-204ENST00000462473 NBPF14Q5TI25 921 aa25.77■■□□□ 1.72
SLC6A1-204ENST00000462473 R3HDM1Q15032 1099 aaKnown RBP25.76■■□□□ 1.71
SLC6A1-204ENST00000462473 EYA1Q99502 592 aa25.76■■□□□ 1.71
SLC6A1-204ENST00000462473 EIF4A2Q14240 407 aaKnown RBP25.74■■□□□ 1.71
SLC6A1-204ENST00000462473 CC2D1BQ5T0F9 858 aaKnown RBP25.72■■□□□ 1.71
SLC6A1-204ENST00000462473 SYTL4Q96C24 671 aaPredicted RBP25.71■■□□□ 1.71
SLC6A1-204ENST00000462473 RREB1Q92766 1687 aa25.71■■□□□ 1.71
SLC6A1-204ENST00000462473 PCDH11XQ9BZA7 1347 aa25.7■■□□□ 1.71
SLC6A1-204ENST00000462473 PCDH11YQ9BZA8 1340 aa25.7■■□□□ 1.71
SLC6A1-204ENST00000462473 PROM2Q8N271 834 aa25.7■■□□□ 1.7
SLC6A1-204ENST00000462473 NHSQ6T4R5 1651 aa25.7■■□□□ 1.7
SLC6A1-204ENST00000462473 TXNRD1Q16881 649 aa25.69■■□□□ 1.7
SLC6A1-204ENST00000462473 NCAPD2Q15021 1401 aa25.69■■□□□ 1.7
SLC6A1-204ENST00000462473 PRIM1P49642 420 aaKnown RBP25.68■■□□□ 1.7
SLC6A1-204ENST00000462473 CNGB1Q14028 1251 aaPredicted RBP25.68■■□□□ 1.7
SLC6A1-204ENST00000462473 KAT6BQ8WYB5 2073 aa25.68■■□□□ 1.7
SLC6A1-204ENST00000462473 RGPD3A6NKT7 1758 aaPredicted RBP25.67■■□□□ 1.7
SLC6A1-204ENST00000462473 RGPD4Q7Z3J3 1758 aa25.67■■□□□ 1.7
SLC6A1-204ENST00000462473 NUP188Q5SRE5 1749 aa25.67■■□□□ 1.7
SLC6A1-204ENST00000462473 SPG7Q9UQ90 795 aa25.66■■□□□ 1.7
SLC6A1-204ENST00000462473 SHANK3Q9BYB0 1731 aa25.65■■□□□ 1.7
SLC6A1-204ENST00000462473 CYP27B1O15528 508 aa25.64■■□□□ 1.7
SLC6A1-204ENST00000462473 IGSF1Q8N6C5 1336 aa25.63■■□□□ 1.69
SLC6A1-204ENST00000462473 MTHFSP49914 203 aa25.63■■□□□ 1.69
SLC6A1-204ENST00000462473 NPC1L1Q9UHC9 1359 aa25.63■■□□□ 1.69
SLC6A1-204ENST00000462473 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.62■■□□□ 1.69
SLC6A1-204ENST00000462473 BTAF1O14981 1849 aa25.6■■□□□ 1.69
SLC6A1-204ENST00000462473 ANO8Q9HCE9 1232 aaPredicted RBP25.6■■□□□ 1.69
SLC6A1-204ENST00000462473 IL13P35225 146 aa25.59■■□□□ 1.69
SLC6A1-204ENST00000462473 STK32BQ9NY57 414 aa25.59■■□□□ 1.69
SLC6A1-204ENST00000462473 DOT1LQ8TEK3 1739 aa25.58■■□□□ 1.69
SLC6A1-204ENST00000462473 IFNL2Q8IZJ0 200 aa25.57■■□□□ 1.68
SLC6A1-204ENST00000462473 PKD1L3Q7Z443 1732 aa25.57■■□□□ 1.68
SLC6A1-204ENST00000462473 NKX1-1Q15270 411 aaPredicted RBP25.56■■□□□ 1.68
SLC6A1-204ENST00000462473 MPRIPQ6WCQ1 1025 aa25.56■■□□□ 1.68
SLC6A1-204ENST00000462473 PHKG2P15735 406 aa25.55■■□□□ 1.68
SLC6A1-204ENST00000462473 SLC15A2Q16348 729 aa25.55■■□□□ 1.68
SLC6A1-204ENST00000462473 PLEKHO1Q53GL0 409 aaPredicted RBP25.55■■□□□ 1.68
SLC6A1-204ENST00000462473 SLC27A3Q5K4L6 730 aa25.55■■□□□ 1.68
SLC6A1-204ENST00000462473 SULT6B1Q6IMI4 303 aa25.55■■□□□ 1.68
SLC6A1-204ENST00000462473 AEBP1Q8IUX7 1158 aa25.55■■□□□ 1.68
SLC6A1-204ENST00000462473 PLEKHG2Q9H7P9 1386 aa25.55■■□□□ 1.68
SLC6A1-204ENST00000462473 LRRC4BQ9NT99 713 aa25.54■■□□□ 1.68
SLC6A1-204ENST00000462473 DIAPH1O60610 1272 aaKnown RBP25.52■■□□□ 1.68
SLC6A1-204ENST00000462473 AMOTQ4VCS5 1084 aa25.52■■□□□ 1.68
SLC6A1-204ENST00000462473 LRP5O75197 1615 aa25.5■■□□□ 1.67
SLC6A1-204ENST00000462473 KCNQ4P56696 695 aa25.49■■□□□ 1.67
SLC6A1-204ENST00000462473 ZNF530Q6P9A1 599 aaPredicted RBP25.49■■□□□ 1.67
SLC6A1-204ENST00000462473 CCNL1Q9UK58 526 aaPredicted RBP25.49■■□□□ 1.67
SLC6A1-204ENST00000462473 KDRP35968 1356 aa25.48■■□□□ 1.67
SLC6A1-204ENST00000462473 PIGBQ92521 554 aa25.48■■□□□ 1.67
SLC6A1-204ENST00000462473 HSP90AB1P08238 724 aaKnown RBP25.47■■□□□ 1.67
SLC6A1-204ENST00000462473 SPON1Q9HCB6 807 aa25.47■■□□□ 1.67
SLC6A1-204ENST00000462473 TMOD3Q9NYL9 352 aa25.47■■□□□ 1.67
SLC6A1-204ENST00000462473 HMOX1P09601 288 aa25.46■■□□□ 1.67
SLC6A1-204ENST00000462473 SMARCC1Q92922 1105 aaPredicted RBP25.46■■□□□ 1.67
SLC6A1-204ENST00000462473 PDGFDQ9GZP0 370 aaPredicted RBP25.46■■□□□ 1.67
SLC6A1-204ENST00000462473 ZNF827Q17R98 1081 aa25.45■■□□□ 1.66
SLC6A1-204ENST00000462473 C1orf141Q5JVX7 400 aa25.45■■□□□ 1.66
SLC6A1-204ENST00000462473 PALLDQ8WX93 1383 aa25.44■■□□□ 1.66
SLC6A1-204ENST00000462473 TOGARAM1Q9Y4F4 1720 aa25.44■■□□□ 1.66
SLC6A1-204ENST00000462473 DCAF5Q96JK2 942 aa25.44■■□□□ 1.66
SLC6A1-204ENST00000462473 CFAP53Q96M91 514 aa25.44■■□□□ 1.66
SLC6A1-204ENST00000462473 U2SURPO15042 1029 aaKnown RBP25.43■■□□□ 1.66
SLC6A1-204ENST00000462473 AKT1S1Q96B36 256 aa25.43■■□□□ 1.66
SLC6A1-204ENST00000462473 PAPPAQ13219 1627 aa25.43■■□□□ 1.66
SLC6A1-204ENST00000462473 ZBTB7AO95365 584 aa25.42■■□□□ 1.66
SLC6A1-204ENST00000462473 LY75O60449 1722 aa25.41■■□□□ 1.66
SLC6A1-204ENST00000462473 ERVV-2B6SEH9 535 aa25.41■■□□□ 1.66
SLC6A1-204ENST00000462473 PPP2R1AP30153 589 aa25.41■■□□□ 1.66
SLC6A1-204ENST00000462473 TFCP2L1Q9NZI6 479 aa25.41■■□□□ 1.66
SLC6A1-204ENST00000462473 ITGB4P16144 1822 aa25.4■■□□□ 1.66
SLC6A1-204ENST00000462473 HMGB2P26583 209 aaKnown RBP25.4■■□□□ 1.66
SLC6A1-204ENST00000462473 COL3A1P02461 1466 aaPredicted RBP25.39■■□□□ 1.65
SLC6A1-204ENST00000462473 CABP4P57796 275 aa25.38■■□□□ 1.65
SLC6A1-204ENST00000462473 PPP1R1BQ9UD71 204 aaPredicted RBP25.38■■□□□ 1.65
SLC6A1-204ENST00000462473 ASAP1Q9ULH1 1129 aa25.38■■□□□ 1.65
SLC6A1-204ENST00000462473 ATF5Q9Y2D1 282 aaPredicted RBP25.38■■□□□ 1.65
SLC6A1-204ENST00000462473 CASZ1Q86V15 1759 aa25.37■■□□□ 1.65
SLC6A1-204ENST00000462473 ZEB1P37275 1124 aaPredicted RBP25.37■■□□□ 1.65
SLC6A1-204ENST00000462473 AKAP4Q5JQC9 854 aa25.36■■□□□ 1.65
SLC6A1-204ENST00000462473 MTFR1LQ9H019 292 aa25.36■■□□□ 1.65
SLC6A1-204ENST00000462473 NUDCQ9Y266 331 aa25.36■■□□□ 1.65
SLC6A1-204ENST00000462473 KDM6AO15550 1401 aaPredicted RBP25.36■■□□□ 1.65
SLC6A1-204ENST00000462473 DDX10Q13206 875 aaKnown RBP25.35■■□□□ 1.65
SLC6A1-204ENST00000462473 ATG3Q9NT62 314 aa25.35■■□□□ 1.65
SLC6A1-204ENST00000462473 PNPLA7Q6ZV29 1317 aa25.35■■□□□ 1.65
SLC6A1-204ENST00000462473 SRCAPQ6ZRS2 3230 aa25.34■■□□□ 1.65
SLC6A1-204ENST00000462473 LOC102724428A0A0B4J2F2 783 aa25.34■■□□□ 1.65
SLC6A1-204ENST00000462473 SIK1P57059 783 aa25.34■■□□□ 1.65
SLC6A1-204ENST00000462473 MTHFSDQ2M296 383 aaKnown RBP25.34■■□□□ 1.65
SLC6A1-204ENST00000462473 ATP6V1AP38606 617 aa25.31■■□□□ 1.64
SLC6A1-204ENST00000462473 NFATC2IPQ8NCF5 419 aa25.31■■□□□ 1.64
SLC6A1-204ENST00000462473 SLC16A10Q8TF71 515 aa25.31■■□□□ 1.64
SLC6A1-204ENST00000462473 PTGER2P43116 358 aa25.3■■□□□ 1.64
SLC6A1-204ENST00000462473 MSH5O43196 834 aa25.29■■□□□ 1.64
SLC6A1-204ENST00000462473 AK7Q96M32 723 aa25.29■■□□□ 1.64
SLC6A1-204ENST00000462473 RBM42Q9BTD8 480 aaKnown RBP25.29■■□□□ 1.64
SLC6A1-204ENST00000462473 U2AF1L5P0DN76 240 aaPredicted RBP25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms