RNA–Protein interactions for RNA: ENST00000462421.1

DDX39B-216, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-216ENST00000462421 NBPF4Q96M43 638 aa12.1□□□□□ -0.47
DDX39B-216ENST00000462421 CAMKK2Q96RR4 588 aa12.1□□□□□ -0.47
DDX39B-216ENST00000462421 EP400Q96L91 3159 aa12.1□□□□□ -0.47
DDX39B-216ENST00000462421 RGPD5Q99666 1765 aa12.1□□□□□ -0.47
DDX39B-216ENST00000462421 WNK3Q9BYP7 1800 aa12.09□□□□□ -0.47
DDX39B-216ENST00000462421 DCAF8L1A6NGE4 600 aa12.09□□□□□ -0.47
DDX39B-216ENST00000462421 CC2D1BQ5T0F9 858 aaKnown RBP12.09□□□□□ -0.47
DDX39B-216ENST00000462421 CFAP53Q96M91 514 aa12.09□□□□□ -0.47
DDX39B-216ENST00000462421 POLKQ9UBT6 870 aa12.09□□□□□ -0.47
DDX39B-216ENST00000462421 HSP90AB1P08238 724 aaKnown RBP12.08□□□□□ -0.48
DDX39B-216ENST00000462421 TXNRD1Q16881 649 aa12.07□□□□□ -0.48
DDX39B-216ENST00000462421 C1orf141Q5JVX7 400 aa12.07□□□□□ -0.48
DDX39B-216ENST00000462421 TNS1Q9HBL0 1735 aaKnown RBP12.06□□□□□ -0.48
DDX39B-216ENST00000462421 ZEB1P37275 1124 aaPredicted RBP12.06□□□□□ -0.48
DDX39B-216ENST00000462421 PLEKHO1Q53GL0 409 aaPredicted RBP12.06□□□□□ -0.48
DDX39B-216ENST00000462421 SLC27A3Q5K4L6 730 aa12.06□□□□□ -0.48
DDX39B-216ENST00000462421 PRIM1P49642 420 aaKnown RBP12.05□□□□□ -0.48
DDX39B-216ENST00000462421 EIF4A2Q14240 407 aaKnown RBP12.05□□□□□ -0.48
DDX39B-216ENST00000462421 AMOTQ4VCS5 1084 aa12.05□□□□□ -0.48
DDX39B-216ENST00000462421 IFNL2Q8IZJ0 200 aa12.05□□□□□ -0.48
DDX39B-216ENST00000462421 SMARCC1Q92922 1105 aaPredicted RBP12.05□□□□□ -0.48
DDX39B-216ENST00000462421 MEGF6O75095 1541 aa12.05□□□□□ -0.48
DDX39B-216ENST00000462421 ANKRD26Q9UPS8 1709 aa12.04□□□□□ -0.48
DDX39B-216ENST00000462421 KCNQ2O43526 872 aa12.04□□□□□ -0.48
DDX39B-216ENST00000462421 NEFMP07197 916 aa12.04□□□□□ -0.48
DDX39B-216ENST00000462421 EYA1Q99502 592 aa12.04□□□□□ -0.48
DDX39B-216ENST00000462421 SPON1Q9HCB6 807 aa12.04□□□□□ -0.48
DDX39B-216ENST00000462421 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.04□□□□□ -0.487e-20■□□□□ 8.6
DDX39B-216ENST00000462421 TMOD3Q9NYL9 352 aa12.04□□□□□ -0.48
DDX39B-216ENST00000462421 NUDCQ9Y266 331 aa12.04□□□□□ -0.48
DDX39B-216ENST00000462421 PLEKHG2Q9H7P9 1386 aa12.04□□□□□ -0.48
DDX39B-216ENST00000462421 DIAPH1O60610 1272 aaKnown RBP12.03□□□□□ -0.48
DDX39B-216ENST00000462421 MPRIPQ6WCQ1 1025 aa12.03□□□□□ -0.48
DDX39B-216ENST00000462421 CCNL1Q9UK58 526 aaPredicted RBP12.03□□□□□ -0.48
DDX39B-216ENST00000462421 AMER1Q5JTC6 1135 aaPredicted RBP12.02□□□□□ -0.49
DDX39B-216ENST00000462421 PEAK1Q9H792 1746 aa12.02□□□□□ -0.49
DDX39B-216ENST00000462421 NHSQ6T4R5 1651 aa12.01□□□□□ -0.49
DDX39B-216ENST00000462421 RGPD3A6NKT7 1758 aaPredicted RBP12.01□□□□□ -0.49
DDX39B-216ENST00000462421 RGPD4Q7Z3J3 1758 aa12.01□□□□□ -0.49
DDX39B-216ENST00000462421 U2SURPO15042 1029 aaKnown RBP12.01□□□□□ -0.49
DDX39B-216ENST00000462421 MTHFSP49914 203 aa12.01□□□□□ -0.49
DDX39B-216ENST00000462421 SULT6B1Q6IMI4 303 aa12.01□□□□□ -0.49
DDX39B-216ENST00000462421 ZNF530Q6P9A1 599 aaPredicted RBP12.01□□□□□ -0.49
DDX39B-216ENST00000462421 TFCP2L1Q9NZI6 479 aa12.01□□□□□ -0.49
DDX39B-216ENST00000462421 NPC1L1Q9UHC9 1359 aa12.01□□□□□ -0.49
DDX39B-216ENST00000462421 SLC15A2Q16348 729 aa12□□□□□ -0.49
DDX39B-216ENST00000462421 RNF39Q9H2S5 420 aa12□□□□□ -0.49
DDX39B-216ENST00000462421 IGSF1Q8N6C5 1336 aa12□□□□□ -0.49
DDX39B-216ENST00000462421 POLD1P28340 1107 aa11.99□□□□□ -0.49
DDX39B-216ENST00000462421 CABP4P57796 275 aa11.99□□□□□ -0.49
DDX39B-216ENST00000462421 PALLDQ8WX93 1383 aa11.98□□□□□ -0.49
DDX39B-216ENST00000462421 PHKG2P15735 406 aa11.98□□□□□ -0.49
DDX39B-216ENST00000462421 PTF1AQ7RTS3 328 aa11.98□□□□□ -0.49
DDX39B-216ENST00000462421 DCAF5Q96JK2 942 aa11.98□□□□□ -0.49
DDX39B-216ENST00000462421 AK7Q96M32 723 aa11.98□□□□□ -0.49
DDX39B-216ENST00000462421 MAP2P11137 1827 aaKnown RBP11.97□□□□□ -0.49
DDX39B-216ENST00000462421 RREB1Q92766 1687 aa11.97□□□□□ -0.49
DDX39B-216ENST00000462421 CYP27B1O15528 508 aa11.97□□□□□ -0.49
DDX39B-216ENST00000462421 FLAD1Q8NFF5 587 aa11.97□□□□□ -0.49
DDX39B-216ENST00000462421 ERVV-2B6SEH9 535 aa11.96□□□□□ -0.49
DDX39B-216ENST00000462421 MTFR1LQ9H019 292 aa11.96□□□□□ -0.49
DDX39B-216ENST00000462421 NUP188Q5SRE5 1749 aa11.96□□□□□ -0.49
DDX39B-216ENST00000462421 DOT1LQ8TEK3 1739 aa11.95□□□□□ -0.5
DDX39B-216ENST00000462421 ZBTB7AO95365 584 aa11.95□□□□□ -0.5
DDX39B-216ENST00000462421 HMOX1P09601 288 aa11.95□□□□□ -0.5
DDX39B-216ENST00000462421 IL13P35225 146 aa11.95□□□□□ -0.5
DDX39B-216ENST00000462421 NKX1-1Q15270 411 aaPredicted RBP11.95□□□□□ -0.5
DDX39B-216ENST00000462421 PNNQ9H307 717 aaKnown RBP11.95□□□□□ -0.5
DDX39B-216ENST00000462421 ANO8Q9HCE9 1232 aaPredicted RBP11.95□□□□□ -0.5
DDX39B-216ENST00000462421 SBF2Q86WG5 1849 aa11.95□□□□□ -0.5
DDX39B-216ENST00000462421 KAT6BQ8WYB5 2073 aa11.95□□□□□ -0.5
DDX39B-216ENST00000462421 NCAPD2Q15021 1401 aa11.94□□□□□ -0.5
DDX39B-216ENST00000462421 LRP5O75197 1615 aa11.94□□□□□ -0.5
DDX39B-216ENST00000462421 PER1O15534 1290 aaPredicted RBP11.94□□□□□ -0.5
DDX39B-216ENST00000462421 AKAP4Q5JQC9 854 aa11.94□□□□□ -0.5
DDX39B-216ENST00000462421 KLHL34Q8N239 644 aa11.94□□□□□ -0.5
DDX39B-216ENST00000462421 GAS2L2Q8NHY3 880 aa11.94□□□□□ -0.5
DDX39B-216ENST00000462421 SLC16A10Q8TF71 515 aa11.94□□□□□ -0.5
DDX39B-216ENST00000462421 RBM42Q9BTD8 480 aaKnown RBP11.94□□□□□ -0.5
DDX39B-216ENST00000462421 RGPD2P0DJD1 1756 aa11.94□□□□□ -0.5
DDX39B-216ENST00000462421 BTAF1O14981 1849 aa11.93□□□□□ -0.5
DDX39B-216ENST00000462421 U2AF1L5P0DN76 240 aaPredicted RBP11.93□□□□□ -0.5
DDX39B-216ENST00000462421 ATP6V1AP38606 617 aa11.93□□□□□ -0.5
DDX39B-216ENST00000462421 U2AF1Q01081 240 aaKnown RBP eCLIP11.93□□□□□ -0.5
DDX39B-216ENST00000462421 NPM2Q86SE8 214 aaKnown RBP11.93□□□□□ -0.5
DDX39B-216ENST00000462421 AEBP1Q8IUX7 1158 aa11.93□□□□□ -0.5
DDX39B-216ENST00000462421 TTC5Q8N0Z6 440 aa11.93□□□□□ -0.5
DDX39B-216ENST00000462421 PROM2Q8N271 834 aa11.93□□□□□ -0.5
DDX39B-216ENST00000462421 RTF1Q92541 710 aaKnown RBP11.93□□□□□ -0.5
DDX39B-216ENST00000462421 ATF5Q9Y2D1 282 aaPredicted RBP11.93□□□□□ -0.5
DDX39B-216ENST00000462421 PIGBQ92521 554 aa11.92□□□□□ -0.5
DDX39B-216ENST00000462421 PKD1L3Q7Z443 1732 aa11.91□□□□□ -0.5
DDX39B-216ENST00000462421 LOC102724428A0A0B4J2F2 783 aa11.91□□□□□ -0.5
DDX39B-216ENST00000462421 SIK1P57059 783 aa11.91□□□□□ -0.5
DDX39B-216ENST00000462421 TEFQ10587 303 aa11.91□□□□□ -0.5
DDX39B-216ENST00000462421 KDRP35968 1356 aa11.91□□□□□ -0.5
DDX39B-216ENST00000462421 MAPK8IP3Q9UPT6 1336 aa11.9□□□□□ -0.5
DDX39B-216ENST00000462421 PHF14O94880 888 aa11.9□□□□□ -0.5
DDX39B-216ENST00000462421 PPP2R1AP30153 589 aa11.9□□□□□ -0.5
DDX39B-216ENST00000462421 RALBP1Q15311 655 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms