RNA–Protein interactions for RNA: ENST00000462400.1

TNRC6A-204, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 2

Gene TNRC6A, Length 2,550 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-204ENST00000462400 MTHFSDQ2M296 383 aaKnown RBP15.19■□□□□ 0.02
TNRC6A-204ENST00000462400 CADPS2Q86UW7 1296 aa15.19■□□□□ 0.02
TNRC6A-204ENST00000462400 CLUAP1Q96AJ1 413 aa15.19■□□□□ 0.02
TNRC6A-204ENST00000462400 IGSF1Q8N6C5 1336 aa15.19■□□□□ 0.02
TNRC6A-204ENST00000462400 ARHGEF10O15013 1369 aa15.19■□□□□ 0.02
TNRC6A-204ENST00000462400 ZC3H6P61129 1189 aaKnown RBP15.19■□□□□ 0.02
TNRC6A-204ENST00000462400 LRRC59Q96AG4 307 aaKnown RBP15.19■□□□□ 0.02
TNRC6A-204ENST00000462400 IL16Q14005 1332 aa15.18■□□□□ 0.02
TNRC6A-204ENST00000462400 TSPYL6Q8N831 410 aa15.18■□□□□ 0.02
TNRC6A-204ENST00000462400 MBIPQ9NS73 344 aa15.18■□□□□ 0.02
TNRC6A-204ENST00000462400 COG6Q9Y2V7 657 aa15.18■□□□□ 0.02
TNRC6A-204ENST00000462400 USP19O94966 1318 aa15.18■□□□□ 0.02
TNRC6A-204ENST00000462400 KIF1AQ12756 1690 aa15.17■□□□□ 0.02
TNRC6A-204ENST00000462400 L1TD1Q5T7N2 865 aaKnown RBP15.17■□□□□ 0.02
TNRC6A-204ENST00000462400 IP6K1Q92551 441 aa15.17■□□□□ 0.02
TNRC6A-204ENST00000462400 RLBP1P12271 317 aa15.17■□□□□ 0.02
TNRC6A-204ENST00000462400 SSH1Q8WYL5 1049 aa15.17■□□□□ 0.02
TNRC6A-204ENST00000462400 SMC4Q9NTJ3 1288 aa15.17■□□□□ 0.02
TNRC6A-204ENST00000462400 RGPD2P0DJD1 1756 aa15.17■□□□□ 0.02
TNRC6A-204ENST00000462400 NBPF6Q5VWK0 638 aa15.16■□□□□ 0.02
TNRC6A-204ENST00000462400 KCNH5Q8NCM2 988 aa15.16■□□□□ 0.02
TNRC6A-204ENST00000462400 NBPF4Q96M43 638 aa15.16■□□□□ 0.02
TNRC6A-204ENST00000462400 VIRMAQ69YN4 1812 aaKnown RBP15.16■□□□□ 0.02
TNRC6A-204ENST00000462400 MIS18AQ9NYP9 233 aa15.16■□□□□ 0.02
TNRC6A-204ENST00000462400 SEC24BO95487 1268 aa15.15■□□□□ 0.02
TNRC6A-204ENST00000462400 BECN1Q14457 450 aa15.15■□□□□ 0.02
TNRC6A-204ENST00000462400 AXIN2Q9Y2T1 843 aa15.15■□□□□ 0.02
TNRC6A-204ENST00000462400 DCCP43146 1447 aa15.15■□□□□ 0.02
TNRC6A-204ENST00000462400 KDRP35968 1356 aa15.15■□□□□ 0.02
TNRC6A-204ENST00000462400 KRT24Q2M2I5 525 aa15.15■□□□□ 0.02
TNRC6A-204ENST00000462400 BRINP3Q76B58 766 aa15.15■□□□□ 0.02
TNRC6A-204ENST00000462400 LMOD3Q0VAK6 560 aa15.14■□□□□ 0.01
TNRC6A-204ENST00000462400 ARHGEF25Q86VW2 580 aa15.14■□□□□ 0.01
TNRC6A-204ENST00000462400 GNAI1P63096 354 aa15.14■□□□□ 0.01
TNRC6A-204ENST00000462400 PKNOX2Q96KN3 472 aa15.14■□□□□ 0.01
TNRC6A-204ENST00000462400 IFT57Q9NWB7 429 aa15.14■□□□□ 0.01
TNRC6A-204ENST00000462400 ZNF853P0CG23 659 aa15.13■□□□□ 0.01
TNRC6A-204ENST00000462400 C8orf58Q8NAV2 365 aa15.13■□□□□ 0.01
TNRC6A-204ENST00000462400 MED1Q15648 1581 aaPredicted RBP15.13■□□□□ 0.01
TNRC6A-204ENST00000462400 NCOA3Q9Y6Q9 1424 aa15.13■□□□□ 0.01
TNRC6A-204ENST00000462400 ALS2Q96Q42 1657 aa15.13■□□□□ 0.01
TNRC6A-204ENST00000462400 IGHDP01880 384 aa15.13■□□□□ 0.01
TNRC6A-204ENST00000462400 CFAP44Q96MT7 982 aa15.13■□□□□ 0.01
TNRC6A-204ENST00000462400 SLIT3O75094 1523 aa15.13■□□□□ 0.01
TNRC6A-204ENST00000462400 RTL1A6NKG5 1358 aa15.12■□□□□ 0.01
TNRC6A-204ENST00000462400 KIF24Q5T7B8 1368 aa15.12■□□□□ 0.01
TNRC6A-204ENST00000462400 NPHP3Q7Z494 1330 aa15.12■□□□□ 0.01
TNRC6A-204ENST00000462400 GLIPR1L2Q4G1C9 344 aa15.12■□□□□ 0.01
TNRC6A-204ENST00000462400 RGPD5Q99666 1765 aa15.12■□□□□ 0.01
TNRC6A-204ENST00000462400 NAP1L5Q96NT1 182 aaPredicted RBP15.12■□□□□ 0.01
TNRC6A-204ENST00000462400 CALD1Q05682 793 aaKnown RBP15.11■□□□□ 0.01
TNRC6A-204ENST00000462400 CHRNA2Q15822 529 aa15.11■□□□□ 0.01
TNRC6A-204ENST00000462400 SLAIN2Q9P270 581 aa15.11■□□□□ 0.01
TNRC6A-204ENST00000462400 NOB1Q9ULX3 412 aaKnown RBP15.11■□□□□ 0.01
TNRC6A-204ENST00000462400 ANKRD24Q8TF21 1146 aa15.11■□□□□ 0.01
TNRC6A-204ENST00000462400 VAMP4O75379 141 aa15.1■□□□□ 0.01
TNRC6A-204ENST00000462400 PDE3AQ14432 1141 aa15.1■□□□□ 0.01
TNRC6A-204ENST00000462400 RTF1Q92541 710 aaKnown RBP15.1■□□□□ 0.01
TNRC6A-204ENST00000462400 TWISTNBQ3B726 338 aaPredicted RBP15.09■□□□□ 0.01
TNRC6A-204ENST00000462400 PXDNQ92626 1479 aa15.09■□□□□ 0.01
TNRC6A-204ENST00000462400 TRIM27P14373 513 aa15.09■□□□□ 0.01
TNRC6A-204ENST00000462400 ZKSCAN2Q63HK3 967 aa15.09■□□□□ 0.01
TNRC6A-204ENST00000462400 CT47B1P0C2W7 299 aaPredicted RBP15.08■□□□□ 0
TNRC6A-204ENST00000462400 XRCC6P12956 609 aaKnown RBP eCLIP15.08■□□□□ 0
TNRC6A-204ENST00000462400 GAS2L2Q8NHY3 880 aa15.08■□□□□ 0
TNRC6A-204ENST00000462400 ANTXR1Q9H6X2 564 aa15.08■□□□□ 0
TNRC6A-204ENST00000462400 TNS3Q68CZ2 1445 aa15.08■□□□□ 0
TNRC6A-204ENST00000462400 GOLGA6L3A6NEY3 463 aa15.08■□□□□ 0
TNRC6A-204ENST00000462400 FTSJ3Q8IY81 847 aaKnown RBP15.08■□□□□ 0
TNRC6A-204ENST00000462400 SPATA31A3Q5VYP0 1347 aa15.08■□□□□ 0
TNRC6A-204ENST00000462400 CRB1P82279 1406 aa15.07■□□□□ 0
TNRC6A-204ENST00000462400 GNAT3A8MTJ3 354 aa15.06■□□□□ 0
TNRC6A-204ENST00000462400 DZIP1LQ8IYY4 767 aaKnown RBP15.06■□□□□ 0
TNRC6A-204ENST00000462400 VSIG10Q8N0Z9 540 aa15.06■□□□□ 0
TNRC6A-204ENST00000462400 PANK2Q9BZ23 570 aa15.06■□□□□ 0
TNRC6A-204ENST00000462400 GZF1Q9H116 711 aaPredicted RBP15.06■□□□□ 0
TNRC6A-204ENST00000462400 CHL1O00533 1208 aa15.06■□□□□ 0
TNRC6A-204ENST00000462400 IL17REQ8NFR9 667 aa15.06■□□□□ 0
TNRC6A-204ENST00000462400 PHRF1Q9P1Y6 1649 aaKnown RBP15.05■□□□□ 0
TNRC6A-204ENST00000462400 TSPYL4Q9UJ04 414 aa15.05■□□□□ 0
TNRC6A-204ENST00000462400 ATF7IPQ6VMQ6 1270 aa15.05■□□□□ -0
TNRC6A-204ENST00000462400 SPRYD3Q8NCJ5 442 aa15.05■□□□□ -0
TNRC6A-204ENST00000462400 ITPRIPQ8IWB1 547 aa15.04■□□□□ -0
TNRC6A-204ENST00000462400 MRPL50Q8N5N7 158 aaKnown RBP15.04■□□□□ -0
TNRC6A-204ENST00000462400 KIAA0232Q92628 1395 aa15.04■□□□□ -0
TNRC6A-204ENST00000462400 HSP90AA2PQ14568 343 aaPredicted RBP15.04■□□□□ -0
TNRC6A-204ENST00000462400 TMEM57Q8N5G2 664 aa15.04■□□□□ -0
TNRC6A-204ENST00000462400 UPF2Q9HAU5 1272 aaKnown RBP15.04■□□□□ -0
TNRC6A-204ENST00000462400 LGR6Q9HBX8 967 aa15.04■□□□□ -0
TNRC6A-204ENST00000462400 NLRP2Q9NX02 1062 aa15.04■□□□□ -0
TNRC6A-204ENST00000462400 MAP3K5Q99683 1374 aa15.04■□□□□ -0
TNRC6A-204ENST00000462400 HSP90AA1P07900 732 aaKnown RBP15.03■□□□□ -0
TNRC6A-204ENST00000462400 CLCN1P35523 988 aa15.03■□□□□ -0
TNRC6A-204ENST00000462400 ALDH1L2Q3SY69 923 aa15.03■□□□□ -0
TNRC6A-204ENST00000462400 TBC1D2Q9BYX2 928 aa15.03■□□□□ -0
TNRC6A-204ENST00000462400 ERBB3P21860 1342 aa15.03■□□□□ -0
TNRC6A-204ENST00000462400 MVPQ14764 893 aaKnown RBP15.03■□□□□ -0
TNRC6A-204ENST00000462400 PCDHB15Q9Y5E8 787 aa15.03■□□□□ -0
TNRC6A-204ENST00000462400 FSD2A1L4K1 749 aa15.02■□□□□ -0
TNRC6A-204ENST00000462400 CSB-PGBD3P0DP91 1061 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms