RNA–Protein interactions for RNA: ENST00000462321.1

PTPN18-207, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 2

Gene PTPN18, Length 1,717 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-207ENST00000462321 PLCH1Q4KWH8 1693 aa25.95■■□□□ 1.75
PTPN18-207ENST00000462321 HTATSF1O43719 755 aaKnown RBP25.95■■□□□ 1.74
PTPN18-207ENST00000462321 LARP1Q6PKG0 1096 aaKnown RBP25.95■■□□□ 1.74
PTPN18-207ENST00000462321 MYH16Q9H6N6 1097 aa25.95■■□□□ 1.74
PTPN18-207ENST00000462321 MEGF6O75095 1541 aa25.95■■□□□ 1.74
PTPN18-207ENST00000462321 MAP3K5Q99683 1374 aa25.94■■□□□ 1.74
PTPN18-207ENST00000462321 TATP17735 454 aaPredicted RBP25.94■■□□□ 1.74
PTPN18-207ENST00000462321 GNAT3A8MTJ3 354 aa25.92■■□□□ 1.74
PTPN18-207ENST00000462321 RTF1Q92541 710 aaKnown RBP25.92■■□□□ 1.74
PTPN18-207ENST00000462321 THUMPD2Q9BTF0 503 aaKnown RBP25.92■■□□□ 1.74
PTPN18-207ENST00000462321 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.91■■□□□ 1.74
PTPN18-207ENST00000462321 SLIT2O94813 1529 aa25.91■■□□□ 1.74
PTPN18-207ENST00000462321 NRAPQ86VF7 1730 aa25.9■■□□□ 1.74
PTPN18-207ENST00000462321 DCTN1Q14203 1278 aa25.9■■□□□ 1.74
PTPN18-207ENST00000462321 ZNF530Q6P9A1 599 aaPredicted RBP25.9■■□□□ 1.74
PTPN18-207ENST00000462321 OVOS2A0A0G2JMS6 1433 aa25.9■■□□□ 1.74
PTPN18-207ENST00000462321 NWD2Q9ULI1 1742 aa25.9■■□□□ 1.74
PTPN18-207ENST00000462321 MCM10Q7L590 875 aa25.89■■□□□ 1.74
PTPN18-207ENST00000462321 IFT57Q9NWB7 429 aa25.89■■□□□ 1.74
PTPN18-207ENST00000462321 LRP6O75581 1613 aa25.89■■□□□ 1.73
PTPN18-207ENST00000462321 AKAP4Q5JQC9 854 aa25.88■■□□□ 1.73
PTPN18-207ENST00000462321 FANCIQ9NVI1 1328 aa25.88■■□□□ 1.73
PTPN18-207ENST00000462321 PARP4Q9UKK3 1724 aaKnown RBP25.88■■□□□ 1.73
PTPN18-207ENST00000462321 SPG7Q9UQ90 795 aa25.88■■□□□ 1.73
PTPN18-207ENST00000462321 GNAI1P63096 354 aa25.87■■□□□ 1.73
PTPN18-207ENST00000462321 PKD1L3Q7Z443 1732 aa25.87■■□□□ 1.73
PTPN18-207ENST00000462321 LRRC37A3O60309 1634 aa25.87■■□□□ 1.73
PTPN18-207ENST00000462321 ZNF853P0CG23 659 aa25.86■■□□□ 1.73
PTPN18-207ENST00000462321 C1orf141Q5JVX7 400 aa25.86■■□□□ 1.73
PTPN18-207ENST00000462321 IL2RBP14784 551 aa25.85■■□□□ 1.73
PTPN18-207ENST00000462321 CFAP44Q96MT7 982 aa25.85■■□□□ 1.73
PTPN18-207ENST00000462321 RCAN3Q9UKA8 241 aa25.85■■□□□ 1.73
PTPN18-207ENST00000462321 TSR2Q969E8 191 aaKnown RBP25.84■■□□□ 1.73
PTPN18-207ENST00000462321 SUPT16HQ9Y5B9 1047 aaKnown RBP25.84■■□□□ 1.73
PTPN18-207ENST00000462321 CEMIPQ8WUJ3 1361 aa25.83■■□□□ 1.73
PTPN18-207ENST00000462321 C8orf37Q96NL8 207 aa25.83■■□□□ 1.72
PTPN18-207ENST00000462321 IL17REQ8NFR9 667 aa25.82■■□□□ 1.72
PTPN18-207ENST00000462321 LAS1LQ9Y4W2 734 aaKnown RBP25.82■■□□□ 1.72
PTPN18-207ENST00000462321 NGLY1Q96IV0 654 aa25.81■■□□□ 1.72
PTPN18-207ENST00000462321 USP35Q9P2H5 1018 aa25.81■■□□□ 1.72
PTPN18-207ENST00000462321 DISP2A7MBM2 1401 aa25.81■■□□□ 1.72
PTPN18-207ENST00000462321 FNBP4Q8N3X1 1017 aaPredicted RBP25.8■■□□□ 1.72
PTPN18-207ENST00000462321 PHKG2P15735 406 aa25.8■■□□□ 1.72
PTPN18-207ENST00000462321 UNC5CLQ8IV45 518 aa25.8■■□□□ 1.72
PTPN18-207ENST00000462321 MBIPQ9NS73 344 aa25.8■■□□□ 1.72
PTPN18-207ENST00000462321 SPATA31A1Q5TZJ5 1347 aa25.79■■□□□ 1.72
PTPN18-207ENST00000462321 CHL1O00533 1208 aa25.79■■□□□ 1.72
PTPN18-207ENST00000462321 CT47B1P0C2W7 299 aaPredicted RBP25.79■■□□□ 1.72
PTPN18-207ENST00000462321 IFNL2Q8IZJ0 200 aa25.79■■□□□ 1.72
PTPN18-207ENST00000462321 ZCRB1Q8TBF4 217 aaKnown RBP25.79■■□□□ 1.72
PTPN18-207ENST00000462321 PCDH11XQ9BZA7 1347 aa25.78■■□□□ 1.72
PTPN18-207ENST00000462321 PCDH11YQ9BZA8 1340 aa25.78■■□□□ 1.72
PTPN18-207ENST00000462321 THRAP3Q9Y2W1 955 aaKnown RBP25.78■■□□□ 1.72
PTPN18-207ENST00000462321 BCL9LQ86UU0 1499 aa25.78■■□□□ 1.72
PTPN18-207ENST00000462321 ADAMTS7Q9UKP4 1686 aa25.78■■□□□ 1.72
PTPN18-207ENST00000462321 RNF123Q5XPI4 1314 aa25.78■■□□□ 1.72
PTPN18-207ENST00000462321 SPATA31A5Q5VU36 1347 aa25.77■■□□□ 1.72
PTPN18-207ENST00000462321 SPATA31A7Q8IWB4 1347 aa25.77■■□□□ 1.72
PTPN18-207ENST00000462321 RNMTO43148 476 aaKnown RBP25.77■■□□□ 1.72
PTPN18-207ENST00000462321 EXOSC9Q06265 439 aaKnown RBP25.77■■□□□ 1.72
PTPN18-207ENST00000462321 CYP27B1O15528 508 aa25.76■■□□□ 1.71
PTPN18-207ENST00000462321 MEX3CQ5U5Q3 659 aaKnown RBP25.76■■□□□ 1.71
PTPN18-207ENST00000462321 MPRIPQ6WCQ1 1025 aa25.76■■□□□ 1.71
PTPN18-207ENST00000462321 LGR6Q9HBX8 967 aa25.76■■□□□ 1.71
PTPN18-207ENST00000462321 BABAM1Q9NWV8 329 aa25.76■■□□□ 1.71
PTPN18-207ENST00000462321 HSP90AB1P08238 724 aaKnown RBP25.75■■□□□ 1.71
PTPN18-207ENST00000462321 CDCA7Q9BWT1 371 aaPredicted RBP25.74■■□□□ 1.71
PTPN18-207ENST00000462321 WNK3Q9BYP7 1800 aa25.74■■□□□ 1.71
PTPN18-207ENST00000462321 KDM6AO15550 1401 aaPredicted RBP25.73■■□□□ 1.71
PTPN18-207ENST00000462321 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.73■■□□□ 1.71
PTPN18-207ENST00000462321 TAF7Q15545 349 aaPredicted RBP25.73■■□□□ 1.71
PTPN18-207ENST00000462321 VPS72Q15906 364 aa25.73■■□□□ 1.71
PTPN18-207ENST00000462321 DCAF5Q96JK2 942 aa25.72■■□□□ 1.71
PTPN18-207ENST00000462321 TSPYL4Q9UJ04 414 aa25.72■■□□□ 1.71
PTPN18-207ENST00000462321 SHANK3Q9BYB0 1731 aa25.72■■□□□ 1.71
PTPN18-207ENST00000462321 NEFLP07196 543 aa25.71■■□□□ 1.71
PTPN18-207ENST00000462321 TEFQ10587 303 aa25.71■■□□□ 1.71
PTPN18-207ENST00000462321 USP21Q9UK80 565 aa25.71■■□□□ 1.71
PTPN18-207ENST00000462321 GTF3C3Q9Y5Q9 886 aa25.71■■□□□ 1.71
PTPN18-207ENST00000462321 RRP1P56182 461 aaKnown RBP25.7■■□□□ 1.7
PTPN18-207ENST00000462321 BARGINQ6ZT62 677 aa25.7■■□□□ 1.7
PTPN18-207ENST00000462321 CCDC9Q9Y3X0 531 aaKnown RBP25.7■■□□□ 1.7
PTPN18-207ENST00000462321 MRC1P22897 1456 aa25.69■■□□□ 1.7
PTPN18-207ENST00000462321 TNS2Q63HR2 1409 aa25.69■■□□□ 1.7
PTPN18-207ENST00000462321 NKX1-1Q15270 411 aaPredicted RBP25.68■■□□□ 1.7
PTPN18-207ENST00000462321 SCN11AQ9UI33 1791 aa25.68■■□□□ 1.7
PTPN18-207ENST00000462321 RARSP54136 660 aaKnown RBP25.68■■□□□ 1.7
PTPN18-207ENST00000462321 ZNF428Q96B54 188 aa25.68■■□□□ 1.7
PTPN18-207ENST00000462321 MIS18AQ9NYP9 233 aa25.68■■□□□ 1.7
PTPN18-207ENST00000462321 AFF2P51816 1311 aa25.66■■□□□ 1.7
PTPN18-207ENST00000462321 VIRMAQ69YN4 1812 aaKnown RBP25.66■■□□□ 1.7
PTPN18-207ENST00000462321 DDX54Q8TDD1 881 aaKnown RBP25.66■■□□□ 1.7
PTPN18-207ENST00000462321 SLC52A2Q9HAB3 445 aa25.66■■□□□ 1.7
PTPN18-207ENST00000462321 EXOC5O00471 708 aa25.65■■□□□ 1.7
PTPN18-207ENST00000462321 C8orf58Q8NAV2 365 aa25.65■■□□□ 1.7
PTPN18-207ENST00000462321 FBXO41Q8TF61 875 aa25.65■■□□□ 1.7
PTPN18-207ENST00000462321 SIPA1L3O60292 1781 aaPredicted RBP25.64■■□□□ 1.7
PTPN18-207ENST00000462321 TWISTNBQ3B726 338 aaPredicted RBP25.64■■□□□ 1.7
PTPN18-207ENST00000462321 TSPYL6Q8N831 410 aa25.64■■□□□ 1.7
PTPN18-207ENST00000462321 BTBD11A6QL63 1104 aa25.63■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms