RNA–Protein interactions for RNA: ENST00000462309.1

COL4A2-203, Transcript of collagen type IV alpha 2 chain, humanhuman

TSL 3

Gene COL4A2, Length 725 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-203ENST00000462309 CCDC102BQ68D86 513 aa13.14□□□□□ -0.31
COL4A2-203ENST00000462309 CCER1Q8TC90 406 aaPredicted RBP13.14□□□□□ -0.31
COL4A2-203ENST00000462309 MTMR7Q9Y216 660 aa13.14□□□□□ -0.31
COL4A2-203ENST00000462309 ARID4AP29374 1257 aaPredicted RBP13.13□□□□□ -0.31
COL4A2-203ENST00000462309 IRX2Q9BZI1 471 aaPredicted RBP13.13□□□□□ -0.31
COL4A2-203ENST00000462309 SEC13P55735 322 aa13.12□□□□□ -0.31
COL4A2-203ENST00000462309 ATP2B4P23634 1241 aa13.11□□□□□ -0.31
COL4A2-203ENST00000462309 PPP1R18Q6NYC8 613 aa13.11□□□□□ -0.31
COL4A2-203ENST00000462309 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.11□□□□□ -0.31
COL4A2-203ENST00000462309 INTS6LQ5JSJ4 861 aaKnown RBP13.1□□□□□ -0.31
COL4A2-203ENST00000462309 TPCN2Q8NHX9 752 aa13.1□□□□□ -0.31
COL4A2-203ENST00000462309 C1orf216Q8TAB5 229 aa13.1□□□□□ -0.31
COL4A2-203ENST00000462309 SFI1A8K8P3 1242 aa13.09□□□□□ -0.31
COL4A2-203ENST00000462309 VASH1Q7L8A9 365 aaPredicted RBP13.09□□□□□ -0.31
COL4A2-203ENST00000462309 CDK15Q96Q40 435 aa13.09□□□□□ -0.31
COL4A2-203ENST00000462309 RANGAP1P46060 587 aaPredicted RBP13.08□□□□□ -0.32
COL4A2-203ENST00000462309 RBM19Q9Y4C8 960 aaKnown RBP13.08□□□□□ -0.32
COL4A2-203ENST00000462309 ERVH48-1M5A8F1 160 aa13.07□□□□□ -0.32
COL4A2-203ENST00000462309 CCDC27Q2M243 656 aa13.07□□□□□ -0.32
COL4A2-203ENST00000462309 RGS20O76081 388 aa13.06□□□□□ -0.32
COL4A2-203ENST00000462309 CD2BP2O95400 341 aaKnown RBP13.06□□□□□ -0.32
COL4A2-203ENST00000462309 OCLNQ16625 522 aa13.06□□□□□ -0.32
COL4A2-203ENST00000462309 RC3H1Q5TC82 1133 aaKnown RBP13.06□□□□□ -0.32
COL4A2-203ENST00000462309 MPNDQ8N594 471 aa13.06□□□□□ -0.32
COL4A2-203ENST00000462309 M0R2N6 131 aa13.05□□□□□ -0.32
COL4A2-203ENST00000462309 SCTRP47872 440 aa13.05□□□□□ -0.32
COL4A2-203ENST00000462309 RAB15P59190 212 aa13.05□□□□□ -0.32
COL4A2-203ENST00000462309 PSME1Q06323 249 aa13.05□□□□□ -0.32
COL4A2-203ENST00000462309 TAS1R3Q7RTX0 852 aa13.05□□□□□ -0.32
COL4A2-203ENST00000462309 EHBP1Q8NDI1 1231 aa13.05□□□□□ -0.32
COL4A2-203ENST00000462309 MYCP01106 439 aaPredicted RBP13.04□□□□□ -0.32
COL4A2-203ENST00000462309 GRM5P41594 1212 aa13.04□□□□□ -0.32
COL4A2-203ENST00000462309 ERVK-9P63128 1117 aa13.04□□□□□ -0.32
COL4A2-203ENST00000462309 SIAH2O43255 324 aa13.03□□□□□ -0.32
COL4A2-203ENST00000462309 PRMT3O60678 531 aa13.03□□□□□ -0.32
COL4A2-203ENST00000462309 LIAT1Q6ZQX7 453 aa13.03□□□□□ -0.32
COL4A2-203ENST00000462309 CXXC1Q9P0U4 656 aaPredicted RBP13.03□□□□□ -0.32
COL4A2-203ENST00000462309 EMID1Q96A84 441 aaPredicted RBP13.02□□□□□ -0.33
COL4A2-203ENST00000462309 PRIMPOLQ96LW4 560 aa13.02□□□□□ -0.33
COL4A2-203ENST00000462309 SCNN1AP37088 669 aa13.01□□□□□ -0.33
COL4A2-203ENST00000462309 ARID5BQ14865 1188 aa13□□□□□ -0.33
COL4A2-203ENST00000462309 FOXD4L5Q5VV16 416 aaPredicted RBP13□□□□□ -0.33
COL4A2-203ENST00000462309 CC2D2BQ6DHV5 1058 aa13□□□□□ -0.33
COL4A2-203ENST00000462309 FOXD4L4Q8WXT5 416 aaPredicted RBP13□□□□□ -0.33
COL4A2-203ENST00000462309 SOWAHDA6NJG2 315 aa12.99□□□□□ -0.33
COL4A2-203ENST00000462309 WEE1P30291 646 aa12.99□□□□□ -0.33
COL4A2-203ENST00000462309 SERPINB4P48594 390 aa12.99□□□□□ -0.33
COL4A2-203ENST00000462309 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.99□□□□□ -0.33
COL4A2-203ENST00000462309 HINFPQ9BQA5 517 aa12.99□□□□□ -0.33
COL4A2-203ENST00000462309 OSBPL3Q9H4L5 887 aa12.99□□□□□ -0.33
COL4A2-203ENST00000462309 TMEM229AB2RXF0 380 aa12.98□□□□□ -0.33
COL4A2-203ENST00000462309 DHX9Q08211 1270 aaKnown RBP12.98□□□□□ -0.33
COL4A2-203ENST00000462309 TSEN2Q8NCE0 465 aaKnown RBP12.98□□□□□ -0.33
COL4A2-203ENST00000462309 TMPRSS4Q9NRS4 437 aa12.98□□□□□ -0.33
COL4A2-203ENST00000462309 ZNF358Q9NW07 568 aa12.98□□□□□ -0.33
COL4A2-203ENST00000462309 FSHRP23945 695 aa12.97□□□□□ -0.33
COL4A2-203ENST00000462309 TRIM52Q96A61 297 aa12.97□□□□□ -0.33
COL4A2-203ENST00000462309 WASLO00401 505 aaPredicted RBP12.95□□□□□ -0.34
COL4A2-203ENST00000462309 LGR5O75473 907 aa12.95□□□□□ -0.34
COL4A2-203ENST00000462309 SCNN1DP51172 638 aa12.95□□□□□ -0.34
COL4A2-203ENST00000462309 ESF1Q9H501 851 aaKnown RBP12.95□□□□□ -0.34
COL4A2-203ENST00000462309 TLL2Q9Y6L7 1015 aa12.95□□□□□ -0.34
COL4A2-203ENST00000462309 WNT7AO00755 349 aa12.94□□□□□ -0.34
COL4A2-203ENST00000462309 LILRA1O75019 489 aa12.94□□□□□ -0.34
COL4A2-203ENST00000462309 ADH1CP00326 375 aa12.94□□□□□ -0.34
COL4A2-203ENST00000462309 NR5A1Q13285 461 aa12.94□□□□□ -0.34
COL4A2-203ENST00000462309 IFFO2Q5TF58 517 aa12.94□□□□□ -0.34
COL4A2-203ENST00000462309 CYLDQ9NQC7 956 aa12.94□□□□□ -0.34
COL4A2-203ENST00000462309 AMOTL2Q9Y2J4 779 aa12.94□□□□□ -0.34
COL4A2-203ENST00000462309 CCDC116Q8IYX3 515 aa12.93□□□□□ -0.34
COL4A2-203ENST00000462309 ZNF784Q8NCA9 323 aaPredicted RBP12.93□□□□□ -0.34
COL4A2-203ENST00000462309 EGFL7Q9UHF1 273 aa12.93□□□□□ -0.34
COL4A2-203ENST00000462309 GDF10P55107 478 aa12.92□□□□□ -0.34
COL4A2-203ENST00000462309 PPP1R26Q5T8A7 1209 aaPredicted RBP12.92□□□□□ -0.34
COL4A2-203ENST00000462309 SLC19A1P41440 591 aa12.91□□□□□ -0.34
COL4A2-203ENST00000462309 MYT1Q01538 1121 aa12.91□□□□□ -0.34
COL4A2-203ENST00000462309 BACH1O14867 736 aa12.9□□□□□ -0.34
COL4A2-203ENST00000462309 STAU1O95793 577 aaKnown RBP12.9□□□□□ -0.34
COL4A2-203ENST00000462309 INHAP05111 366 aa12.9□□□□□ -0.34
COL4A2-203ENST00000462309 IGFBP4P22692 258 aa12.9□□□□□ -0.34
COL4A2-203ENST00000462309 ADD1P35611 737 aaKnown RBP12.9□□□□□ -0.34
COL4A2-203ENST00000462309 FKBP5Q13451 457 aaPredicted RBP12.9□□□□□ -0.34
COL4A2-203ENST00000462309 MRGPRX2Q96LB1 330 aa12.9□□□□□ -0.34
COL4A2-203ENST00000462309 SLC4A9Q96Q91 983 aa12.9□□□□□ -0.34
COL4A2-203ENST00000462309 EPHA4P54764 986 aa12.89□□□□□ -0.35
COL4A2-203ENST00000462309 ETNK1Q9HBU6 452 aa12.89□□□□□ -0.35
COL4A2-203ENST00000462309 GNRH1P01148 92 aa12.88□□□□□ -0.35
COL4A2-203ENST00000462309 NR3C2P08235 984 aa12.88□□□□□ -0.35
COL4A2-203ENST00000462309 DNAJC14Q6Y2X3 702 aaPredicted RBP12.88□□□□□ -0.35
COL4A2-203ENST00000462309 COL26A1Q96A83 441 aa12.88□□□□□ -0.35
COL4A2-203ENST00000462309 ZNF428Q96B54 188 aa12.88□□□□□ -0.35
COL4A2-203ENST00000462309 PURBQ96QR8 312 aaKnown RBP12.88□□□□□ -0.35
COL4A2-203ENST00000462309 SEPT3Q9UH03 358 aa12.88□□□□□ -0.35
COL4A2-203ENST00000462309 ICMTO60725 284 aa12.87□□□□□ -0.35
COL4A2-203ENST00000462309 SPRYD7Q5W111 196 aa12.87□□□□□ -0.35
COL4A2-203ENST00000462309 CAPN12Q6ZSI9 719 aa12.87□□□□□ -0.35
COL4A2-203ENST00000462309 CYP2U1Q7Z449 544 aa12.87□□□□□ -0.35
COL4A2-203ENST00000462309 TNS4Q8IZW8 715 aa12.87□□□□□ -0.35
COL4A2-203ENST00000462309 PTCD1O75127 700 aaKnown RBP12.86□□□□□ -0.35
COL4A2-203ENST00000462309 GTF3C2Q8WUA4 911 aaPredicted RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms