RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 CEP152O94986 1710 aa8.79□□□□□ -1
VPS36-202ENST00000462289 CAMSAP1Q5T5Y3 1602 aa8.79□□□□□ -1
VPS36-202ENST00000462289 NPATQ14207 1427 aa8.79□□□□□ -1
VPS36-202ENST00000462289 ARHGAP31Q2M1Z3 1444 aa8.79□□□□□ -1
VPS36-202ENST00000462289 ZNF142P52746 1687 aaPredicted RBP8.78□□□□□ -1
VPS36-202ENST00000462289 ZBTB24O43167 697 aaPredicted RBP8.78□□□□□ -1
VPS36-202ENST00000462289 FOXC1Q12948 553 aa8.78□□□□□ -1
VPS36-202ENST00000462289 TET3O43151 1660 aa8.78□□□□□ -1
VPS36-202ENST00000462289 SPATA31D1Q6ZQQ2 1576 aa8.78□□□□□ -1
VPS36-202ENST00000462289 PZPP20742 1482 aa8.77□□□□□ -1
VPS36-202ENST00000462289 AMHR2Q16671 573 aa8.77□□□□□ -1.01
VPS36-202ENST00000462289 CRIPAKQ8N1N5 446 aa8.77□□□□□ -1.01
VPS36-202ENST00000462289 PREX1Q8TCU6 1659 aa8.77□□□□□ -1.01
VPS36-202ENST00000462289 EFCAB6Q5THR3 1501 aa8.76□□□□□ -1.01
VPS36-202ENST00000462289 AVPP01185 164 aa8.76□□□□□ -1.01
VPS36-202ENST00000462289 GUCA2AQ02747 115 aa8.76□□□□□ -1.01
VPS36-202ENST00000462289 TRIM32Q13049 653 aa8.76□□□□□ -1.01
VPS36-202ENST00000462289 PPARGC1BQ86YN6 1023 aaKnown RBP8.76□□□□□ -1.01
VPS36-202ENST00000462289 ZC3H15Q8WU90 426 aaKnown RBP8.76□□□□□ -1.01
VPS36-202ENST00000462289 KDM5AP29375 1690 aaKnown RBP8.75□□□□□ -1.01
VPS36-202ENST00000462289 WNT7AO00755 349 aa8.75□□□□□ -1.01
VPS36-202ENST00000462289 FAM50AQ14320 339 aaKnown RBP8.75□□□□□ -1.01
VPS36-202ENST00000462289 KRI1Q8N9T8 703 aaKnown RBP8.75□□□□□ -1.01
VPS36-202ENST00000462289 AAASQ9NRG9 546 aa8.75□□□□□ -1.01
VPS36-202ENST00000462289 RPRD2Q5VT52 1461 aaKnown RBP8.75□□□□□ -1.01
VPS36-202ENST00000462289 LMTK3Q96Q04 1460 aa8.75□□□□□ -1.01
VPS36-202ENST00000462289 ZMYM3Q14202 1370 aa8.74□□□□□ -1.01
VPS36-202ENST00000462289 KIF3BO15066 747 aa8.74□□□□□ -1.01
VPS36-202ENST00000462289 SSTR3P32745 418 aaPredicted RBP8.74□□□□□ -1.01
VPS36-202ENST00000462289 NUTM1Q86Y26 1132 aa8.74□□□□□ -1.01
VPS36-202ENST00000462289 E9PCH4 1651 aa8.74□□□□□ -1.01
VPS36-202ENST00000462289 PIK3C2BO00750 1634 aa8.73□□□□□ -1.01
VPS36-202ENST00000462289 MYO3AQ8NEV4 1616 aa8.73□□□□□ -1.01
VPS36-202ENST00000462289 JUNDP17535 347 aa8.73□□□□□ -1.01
VPS36-202ENST00000462289 RETREG3Q86VR2 466 aa8.73□□□□□ -1.01
VPS36-202ENST00000462289 CYP4X1Q8N118 509 aa8.73□□□□□ -1.01
VPS36-202ENST00000462289 RRP7BPQ9NSQ0 103 aa8.73□□□□□ -1.01
VPS36-202ENST00000462289 ARID4BQ4LE39 1312 aaPredicted RBP8.73□□□□□ -1.01
VPS36-202ENST00000462289 NOS1P29475 1434 aa8.72□□□□□ -1.01
VPS36-202ENST00000462289 ERVK-7P63135 1459 aa8.72□□□□□ -1.01
VPS36-202ENST00000462289 SYMPKQ92797 1274 aaKnown RBP8.72□□□□□ -1.01
VPS36-202ENST00000462289 CHIC2Q9UKJ5 165 aa8.72□□□□□ -1.01
VPS36-202ENST00000462289 PCDHGC3Q9UN70 934 aa8.72□□□□□ -1.01
VPS36-202ENST00000462289 SYNMO15061 1565 aa8.71□□□□□ -1.02
VPS36-202ENST00000462289 POTECB2RU33 542 aa8.71□□□□□ -1.02
VPS36-202ENST00000462289 ST8SIA5O15466 376 aa8.71□□□□□ -1.02
VPS36-202ENST00000462289 SMCPP49901 116 aaPredicted RBP8.71□□□□□ -1.02
VPS36-202ENST00000462289 SPIRE2Q8WWL2 714 aa8.71□□□□□ -1.02
VPS36-202ENST00000462289 CFAP65Q6ZU64 1925 aaKnown RBP8.7□□□□□ -1.02
VPS36-202ENST00000462289 FDX1P10109 184 aa8.7□□□□□ -1.02
VPS36-202ENST00000462289 CTC1Q2NKJ3 1217 aa8.7□□□□□ -1.02
VPS36-202ENST00000462289 GIGYF2Q6Y7W6 1299 aaKnown RBP8.7□□□□□ -1.02
VPS36-202ENST00000462289 SNIP1Q8TAD8 396 aaKnown RBP8.7□□□□□ -1.02
VPS36-202ENST00000462289 ZNF775Q96BV0 537 aaPredicted RBP8.7□□□□□ -1.02
VPS36-202ENST00000462289 PTPRTO14522 1441 aa8.7□□□□□ -1.02
VPS36-202ENST00000462289 CEP170BQ9Y4F5 1589 aaPredicted RBP8.69□□□□□ -1.02
VPS36-202ENST00000462289 STRCQ7RTU9 1775 aa8.69□□□□□ -1.02
VPS36-202ENST00000462289 HRCP23327 699 aa8.69□□□□□ -1.02
VPS36-202ENST00000462289 WNT7BP56706 349 aa8.69□□□□□ -1.02
VPS36-202ENST00000462289 TTLL12Q14166 644 aaPredicted RBP8.69□□□□□ -1.02
VPS36-202ENST00000462289 GGT6Q6P531 493 aa8.69□□□□□ -1.02
VPS36-202ENST00000462289 MRGPRX2Q96LB1 330 aa8.69□□□□□ -1.02
VPS36-202ENST00000462289 NLRP1Q9C000 1473 aa8.69□□□□□ -1.02
VPS36-202ENST00000462289 SPHKAPQ2M3C7 1700 aa8.68□□□□□ -1.02
VPS36-202ENST00000462289 UBR1Q8IWV7 1749 aa8.68□□□□□ -1.02
VPS36-202ENST00000462289 SKOR1P84550 965 aa8.68□□□□□ -1.02
VPS36-202ENST00000462289 MLECQ14165 292 aa8.68□□□□□ -1.02
VPS36-202ENST00000462289 CCDC24Q8N4L8 307 aa8.68□□□□□ -1.02
VPS36-202ENST00000462289 ACIN1Q9UKV3 1341 aaKnown RBP8.68□□□□□ -1.02
VPS36-202ENST00000462289 A2ML1A8K2U0 1454 aa8.68□□□□□ -1.02
VPS36-202ENST00000462289 TTC24A2A3L6 582 aaPredicted RBP8.67□□□□□ -1.02
VPS36-202ENST00000462289 SMPD1P17405 629 aa8.67□□□□□ -1.02
VPS36-202ENST00000462289 PLA2R1Q13018 1463 aa8.67□□□□□ -1.02
VPS36-202ENST00000462289 NUDT12Q9BQG2 462 aa8.67□□□□□ -1.02
VPS36-202ENST00000462289 SETD5Q9C0A6 1442 aa8.67□□□□□ -1.02
VPS36-202ENST00000462289 WASHC2CQ9Y4E1 1318 aa8.67□□□□□ -1.02
VPS36-202ENST00000462289 NEURL4Q96JN8 1562 aa8.66□□□□□ -1.02
VPS36-202ENST00000462289 TRPM2O94759 1503 aa8.66□□□□□ -1.02
VPS36-202ENST00000462289 KANK1Q14678 1352 aa8.66□□□□□ -1.02
VPS36-202ENST00000462289 MOXD2PA6NHM9 499 aa8.66□□□□□ -1.02
VPS36-202ENST00000462289 AXIN1O15169 862 aa8.66□□□□□ -1.02
VPS36-202ENST00000462289 GJA5P36382 358 aa8.66□□□□□ -1.02
VPS36-202ENST00000462289 CEBPAP49715 358 aaPredicted RBP8.66□□□□□ -1.02
VPS36-202ENST00000462289 SLIT1O75093 1534 aa8.65□□□□□ -1.02
VPS36-202ENST00000462289 ARHGAP23Q9P227 1491 aa8.65□□□□□ -1.02
VPS36-202ENST00000462289 UHRF1BP1Q6BDS2 1440 aa8.65□□□□□ -1.02
VPS36-202ENST00000462289 TNRQ92752 1358 aa8.65□□□□□ -1.02
VPS36-202ENST00000462289 C6orf229H3BNL8 230 aa8.65□□□□□ -1.02
VPS36-202ENST00000462289 NDUFV2P19404 249 aa8.65□□□□□ -1.02
VPS36-202ENST00000462289 PARP9Q8IXQ6 854 aa8.65□□□□□ -1.02
VPS36-202ENST00000462289 BEGAINQ9BUH8 593 aa8.65□□□□□ -1.02
VPS36-202ENST00000462289 DACH1Q9UI36 760 aa8.65□□□□□ -1.02
VPS36-202ENST00000462289 MYO5BQ9ULV0 1848 aa8.65□□□□□ -1.02
VPS36-202ENST00000462289 TMEM131LA2VDJ0 1609 aa8.65□□□□□ -1.03
VPS36-202ENST00000462289 NUP155O75694 1391 aa8.64□□□□□ -1.03
VPS36-202ENST00000462289 POLR1AO95602 1720 aaPredicted RBP8.64□□□□□ -1.03
VPS36-202ENST00000462289 TRIM66O15016 1216 aa8.64□□□□□ -1.03
VPS36-202ENST00000462289 PTPRNQ16849 979 aa8.64□□□□□ -1.03
VPS36-202ENST00000462289 RC3H1Q5TC82 1133 aaKnown RBP8.64□□□□□ -1.03
VPS36-202ENST00000462289 DESI1Q6ICB0 168 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms