RNA–Protein interactions for RNA: ENST00000462181.1

CALD1-213, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 188 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-213ENST00000462181 SCARF1Q14162 830 aa10.98□□□□□ -0.65
CALD1-213ENST00000462181 MRPL14Q6P1L8 145 aaKnown RBP10.98□□□□□ -0.65
CALD1-213ENST00000462181 TSEN34Q9BSV6 310 aaKnown RBP10.98□□□□□ -0.65
CALD1-213ENST00000462181 USP17L3A6NCW0 530 aa10.97□□□□□ -0.65
CALD1-213ENST00000462181 USP17L4A6NCW7 530 aa10.97□□□□□ -0.65
CALD1-213ENST00000462181 BMP1P13497 986 aa10.97□□□□□ -0.65
CALD1-213ENST00000462181 LMOD1P29536 600 aaPredicted RBP10.97□□□□□ -0.65
CALD1-213ENST00000462181 USP17L2Q6R6M4 530 aa10.97□□□□□ -0.65
CALD1-213ENST00000462181 USP17L1Q7RTZ2 530 aa10.97□□□□□ -0.65
CALD1-213ENST00000462181 PLEKHM2Q8IWE5 1019 aa10.97□□□□□ -0.65
CALD1-213ENST00000462181 AGBL1Q96MI9 1066 aa10.97□□□□□ -0.65
CALD1-213ENST00000462181 OSBPL3Q9H4L5 887 aa10.97□□□□□ -0.65
CALD1-213ENST00000462181 ATP13A2Q9NQ11 1180 aa10.97□□□□□ -0.65
CALD1-213ENST00000462181 DACH1Q9UI36 760 aa10.97□□□□□ -0.65
CALD1-213ENST00000462181 NOD1Q9Y239 953 aa10.97□□□□□ -0.65
CALD1-213ENST00000462181 ATP5J2-PTCD1G3V325 749 aa10.96□□□□□ -0.65
CALD1-213ENST00000462181 LCE2BO14633 110 aa10.96□□□□□ -0.65
CALD1-213ENST00000462181 RELBQ01201 579 aa10.96□□□□□ -0.65
CALD1-213ENST00000462181 CYP2U1Q7Z449 544 aa10.96□□□□□ -0.65
CALD1-213ENST00000462181 LINC00528Q8N1L1 170 aa10.96□□□□□ -0.65
CALD1-213ENST00000462181 MAFBQ9Y5Q3 323 aaPredicted RBP10.96□□□□□ -0.65
CALD1-213ENST00000462181 BMP2P12643 396 aa10.95□□□□□ -0.66
CALD1-213ENST00000462181 C6orf118Q5T5N4 469 aa10.95□□□□□ -0.66
CALD1-213ENST00000462181 TRIM46Q7Z4K8 759 aa10.95□□□□□ -0.66
CALD1-213ENST00000462181 C1orf115Q9H7X2 142 aa10.95□□□□□ -0.66
CALD1-213ENST00000462181 PTGIRP43119 386 aa10.94□□□□□ -0.66
CALD1-213ENST00000462181 CCDC82Q8N4S0 544 aa10.94□□□□□ -0.66
CALD1-213ENST00000462181 PURBQ96QR8 312 aaKnown RBP10.94□□□□□ -0.66
CALD1-213ENST00000462181 RFX1P22670 979 aa10.93□□□□□ -0.66
CALD1-213ENST00000462181 ZNF395Q9H8N7 513 aaPredicted RBP10.93□□□□□ -0.66
CALD1-213ENST00000462181 MKRN1Q9UHC7 482 aaKnown RBP10.93□□□□□ -0.66
CALD1-213ENST00000462181 CFAP70Q5T0N1 1121 aa10.92□□□□□ -0.66
CALD1-213ENST00000462181 TRIM50Q86XT4 487 aa10.92□□□□□ -0.66
CALD1-213ENST00000462181 ZFP42Q96MM3 310 aa10.92□□□□□ -0.66
CALD1-213ENST00000462181 GNRH1P01148 92 aa10.91□□□□□ -0.66
CALD1-213ENST00000462181 GTF2IP78347 998 aa10.91□□□□□ -0.66
CALD1-213ENST00000462181 KDF1Q8NAX2 398 aaPredicted RBP10.91□□□□□ -0.66
CALD1-213ENST00000462181 SENP2Q9HC62 589 aa10.91□□□□□ -0.66
CALD1-213ENST00000462181 VRTNQ9H8Y1 702 aa10.9□□□□□ -0.66
CALD1-213ENST00000462181 A0A1W2PRU2 124 aa10.89□□□□□ -0.67
CALD1-213ENST00000462181 SPINT1O43278 529 aa10.89□□□□□ -0.67
CALD1-213ENST00000462181 ATP1A2P50993 1020 aa10.89□□□□□ -0.67
CALD1-213ENST00000462181 PSME1Q06323 249 aa10.89□□□□□ -0.67
CALD1-213ENST00000462181 ARHGEF10LQ9HCE6 1279 aa10.89□□□□□ -0.67
CALD1-213ENST00000462181 GMPR2Q9P2T1 348 aaKnown RBP10.89□□□□□ -0.67
CALD1-213ENST00000462181 PCDHGA11Q9Y5H2 935 aa10.89□□□□□ -0.67
CALD1-213ENST00000462181 MEN1O00255 615 aa10.88□□□□□ -0.67
CALD1-213ENST00000462181 ESCO1Q5FWF5 840 aa10.88□□□□□ -0.67
CALD1-213ENST00000462181 KIFC2Q96AC6 838 aa10.88□□□□□ -0.67
CALD1-213ENST00000462181 RAB6BQ9NRW1 208 aa10.88□□□□□ -0.67
CALD1-213ENST00000462181 RASA1P20936 1047 aa10.87□□□□□ -0.67
CALD1-213ENST00000462181 OGFOD1Q8N543 542 aa10.87□□□□□ -0.67
CALD1-213ENST00000462181 NLRP3Q96P20 1036 aa10.87□□□□□ -0.67
CALD1-213ENST00000462181 INSM2Q96T92 566 aaPredicted RBP10.87□□□□□ -0.67
CALD1-213ENST00000462181 POLMQ9NP87 494 aaPredicted RBP10.87□□□□□ -0.67
CALD1-213ENST00000462181 KANK4Q5T7N3 995 aaPredicted RBP10.86□□□□□ -0.67
CALD1-213ENST00000462181 LARP1Q6PKG0 1096 aaKnown RBP10.86□□□□□ -0.67
CALD1-213ENST00000462181 ARID3AQ99856 593 aa10.86□□□□□ -0.67
CALD1-213ENST00000462181 DNAAF2Q9NVR5 837 aaKnown RBP10.86□□□□□ -0.67
CALD1-213ENST00000462181 C11orf95C9JLR9 678 aaPredicted RBP10.85□□□□□ -0.67
CALD1-213ENST00000462181 CLDN10P78369 228 aa10.85□□□□□ -0.67
CALD1-213ENST00000462181 CLN3Q13286 438 aa10.85□□□□□ -0.67
CALD1-213ENST00000462181 CDCA8Q53HL2 280 aa10.85□□□□□ -0.67
CALD1-213ENST00000462181 TTLL8A6PVC2 850 aa10.84□□□□□ -0.67
CALD1-213ENST00000462181 STAU1O95793 577 aaKnown RBP10.84□□□□□ -0.67
CALD1-213ENST00000462181 CTSOP43234 321 aaPredicted RBP10.84□□□□□ -0.67
CALD1-213ENST00000462181 GDF10P55107 478 aa10.84□□□□□ -0.67
CALD1-213ENST00000462181 LARGE2Q8N3Y3 721 aa10.84□□□□□ -0.67
CALD1-213ENST00000462181 CNKSR1Q969H4 720 aa10.84□□□□□ -0.67
CALD1-213ENST00000462181 TRIM47Q96LD4 638 aa10.84□□□□□ -0.67
CALD1-213ENST00000462181 ETNK1Q9HBU6 452 aa10.84□□□□□ -0.67
CALD1-213ENST00000462181 RBM19Q9Y4C8 960 aaKnown RBP10.84□□□□□ -0.67
CALD1-213ENST00000462181 ZBTB7BO15156 539 aaPredicted RBP10.83□□□□□ -0.68
CALD1-213ENST00000462181 CCDC102BQ68D86 513 aa10.83□□□□□ -0.68
CALD1-213ENST00000462181 XAGE2Q96GT9 111 aa10.83□□□□□ -0.68
CALD1-213ENST00000462181 ESYT1Q9BSJ8 1104 aa10.83□□□□□ -0.68
CALD1-213ENST00000462181 SOS2Q07890 1332 aaPredicted RBP10.83□□□□□ -0.68
CALD1-213ENST00000462181 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.82□□□□□ -0.68
CALD1-213ENST00000462181 POTECB2RU33 542 aa10.82□□□□□ -0.68
CALD1-213ENST00000462181 IL2RAP01589 272 aa10.82□□□□□ -0.68
CALD1-213ENST00000462181 INHAP05111 366 aa10.82□□□□□ -0.68
CALD1-213ENST00000462181 TPCN2Q8NHX9 752 aa10.82□□□□□ -0.68
CALD1-213ENST00000462181 ZNF594Q96JF6 807 aaPredicted RBP10.82□□□□□ -0.68
CALD1-213ENST00000462181 FIGNL2A6NMB9 653 aa10.81□□□□□ -0.68
CALD1-213ENST00000462181 MAN1A2O60476 641 aa10.81□□□□□ -0.68
CALD1-213ENST00000462181 GPC1P35052 558 aa10.81□□□□□ -0.68
CALD1-213ENST00000462181 RNF144AP50876 292 aaPredicted RBP10.81□□□□□ -0.68
CALD1-213ENST00000462181 SCNN1DP51172 638 aa10.81□□□□□ -0.68
CALD1-213ENST00000462181 ZNF787Q6DD87 383 aa10.81□□□□□ -0.68
CALD1-213ENST00000462181 KIAA1024Q9UPX6 916 aa10.81□□□□□ -0.68
CALD1-213ENST00000462181 FAM196BA6NMK8 535 aa10.8□□□□□ -0.68
CALD1-213ENST00000462181 TMEM229AB2RXF0 380 aa10.8□□□□□ -0.68
CALD1-213ENST00000462181 CENPCQ03188 943 aa10.8□□□□□ -0.68
CALD1-213ENST00000462181 CRTC2Q53ET0 693 aaPredicted RBP10.8□□□□□ -0.68
CALD1-213ENST00000462181 SLC27A3Q5K4L6 730 aa10.8□□□□□ -0.68
CALD1-213ENST00000462181 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.8□□□□□ -0.68
CALD1-213ENST00000462181 PBXIP1Q96AQ6 731 aa10.8□□□□□ -0.68
CALD1-213ENST00000462181 SERTAD1Q9UHV2 236 aa10.8□□□□□ -0.68
CALD1-213ENST00000462181 USP17L15C9J2P7 530 aa10.79□□□□□ -0.68
CALD1-213ENST00000462181 USP17L10C9JJH3 530 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms