RNA–Protein interactions for RNA: ENST00000461577.5

TRAPPC12-213, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-213ENST00000461577 DDX10Q13206 875 aaKnown RBP14.31□□□□□ -0.12
TRAPPC12-213ENST00000461577 BCL11BQ9C0K0 894 aaPredicted RBP14.31□□□□□ -0.12
TRAPPC12-213ENST00000461577 NCAPD2Q15021 1401 aa14.31□□□□□ -0.12
TRAPPC12-213ENST00000461577 SHANK3Q9BYB0 1731 aa14.3□□□□□ -0.12
TRAPPC12-213ENST00000461577 ACSBG1Q96GR2 724 aa14.3□□□□□ -0.12
TRAPPC12-213ENST00000461577 IGSF1Q8N6C5 1336 aa14.3□□□□□ -0.12
TRAPPC12-213ENST00000461577 IL13P35225 146 aa14.29□□□□□ -0.12
TRAPPC12-213ENST00000461577 SPG7Q9UQ90 795 aa14.29□□□□□ -0.12
TRAPPC12-213ENST00000461577 PCDH11XQ9BZA7 1347 aa14.29□□□□□ -0.12
TRAPPC12-213ENST00000461577 PCDH11YQ9BZA8 1340 aa14.29□□□□□ -0.12
TRAPPC12-213ENST00000461577 DIAPH1O60610 1272 aaKnown RBP14.28□□□□□ -0.12
TRAPPC12-213ENST00000461577 EZH2Q15910 746 aaKnown RBP14.28□□□□□ -0.12
TRAPPC12-213ENST00000461577 NHSQ6T4R5 1651 aa14.28□□□□□ -0.12
TRAPPC12-213ENST00000461577 PKD1L3Q7Z443 1732 aa14.27□□□□□ -0.12
TRAPPC12-213ENST00000461577 PARD3Q8TEW0 1356 aa14.27□□□□□ -0.12
TRAPPC12-213ENST00000461577 KCNQ2O43526 872 aa14.27□□□□□ -0.13
TRAPPC12-213ENST00000461577 SULT6B1Q6IMI4 303 aa14.27□□□□□ -0.13
TRAPPC12-213ENST00000461577 CFAP53Q96M91 514 aa14.27□□□□□ -0.13
TRAPPC12-213ENST00000461577 CAMKK2Q96RR4 588 aa14.27□□□□□ -0.13
TRAPPC12-213ENST00000461577 PPP2R1AP30153 589 aa14.26□□□□□ -0.13
TRAPPC12-213ENST00000461577 PTF1AQ7RTS3 328 aa14.26□□□□□ -0.13
TRAPPC12-213ENST00000461577 DOT1LQ8TEK3 1739 aa14.26□□□□□ -0.13
TRAPPC12-213ENST00000461577 PLSCR1O15162 318 aa14.25□□□□□ -0.13
TRAPPC12-213ENST00000461577 SYTL4Q96C24 671 aaPredicted RBP14.25□□□□□ -0.13
TRAPPC12-213ENST00000461577 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.25□□□□□ -0.13
TRAPPC12-213ENST00000461577 BTAF1O14981 1849 aa14.25□□□□□ -0.13
TRAPPC12-213ENST00000461577 CYP27B1O15528 508 aa14.24□□□□□ -0.13
TRAPPC12-213ENST00000461577 PLEKHO1Q53GL0 409 aaPredicted RBP14.24□□□□□ -0.13
TRAPPC12-213ENST00000461577 AEBP1Q8IUX7 1158 aa14.24□□□□□ -0.13
TRAPPC12-213ENST00000461577 RGPD3A6NKT7 1758 aaPredicted RBP14.24□□□□□ -0.13
TRAPPC12-213ENST00000461577 RGPD4Q7Z3J3 1758 aa14.24□□□□□ -0.13
TRAPPC12-213ENST00000461577 RREB1Q92766 1687 aa14.23□□□□□ -0.13
TRAPPC12-213ENST00000461577 PLEKHG2Q9H7P9 1386 aa14.23□□□□□ -0.13
TRAPPC12-213ENST00000461577 U2SURPO15042 1029 aaKnown RBP14.23□□□□□ -0.13
TRAPPC12-213ENST00000461577 PRIM1P49642 420 aaKnown RBP14.23□□□□□ -0.13
TRAPPC12-213ENST00000461577 IFNL2Q8IZJ0 200 aa14.23□□□□□ -0.13
TRAPPC12-213ENST00000461577 HMOX1P09601 288 aa14.22□□□□□ -0.13
TRAPPC12-213ENST00000461577 AMOTQ4VCS5 1084 aa14.22□□□□□ -0.13
TRAPPC12-213ENST00000461577 COL3A1P02461 1466 aaPredicted RBP14.22□□□□□ -0.13
TRAPPC12-213ENST00000461577 KDRP35968 1356 aa14.22□□□□□ -0.13
TRAPPC12-213ENST00000461577 NUP188Q5SRE5 1749 aa14.21□□□□□ -0.13
TRAPPC12-213ENST00000461577 ZNF316A6NFI3 1004 aaPredicted RBP14.21□□□□□ -0.13
TRAPPC12-213ENST00000461577 PHKG2P15735 406 aa14.21□□□□□ -0.13
TRAPPC12-213ENST00000461577 NUDCQ9Y266 331 aa14.21□□□□□ -0.13
TRAPPC12-213ENST00000461577 RALBP1Q15311 655 aa14.2□□□□□ -0.14
TRAPPC12-213ENST00000461577 C1orf141Q5JVX7 400 aa14.2□□□□□ -0.14
TRAPPC12-213ENST00000461577 NBPF14Q5TI25 921 aa14.2□□□□□ -0.14
TRAPPC12-213ENST00000461577 ZNF530Q6P9A1 599 aaPredicted RBP14.2□□□□□ -0.14
TRAPPC12-213ENST00000461577 HSP90AB1P08238 724 aaKnown RBP14.19□□□□□ -0.14
TRAPPC12-213ENST00000461577 NKX1-1Q15270 411 aaPredicted RBP14.19□□□□□ -0.14
TRAPPC12-213ENST00000461577 TXNRD1Q16881 649 aa14.19□□□□□ -0.14
TRAPPC12-213ENST00000461577 ITGB4P16144 1822 aa14.19□□□□□ -0.14
TRAPPC12-213ENST00000461577 TOGARAM1Q9Y4F4 1720 aa14.18□□□□□ -0.14
TRAPPC12-213ENST00000461577 MPRIPQ6WCQ1 1025 aa14.18□□□□□ -0.14
TRAPPC12-213ENST00000461577 PSDA5PKW4 1024 aaPredicted RBP14.17□□□□□ -0.14
TRAPPC12-213ENST00000461577 U2AF1L5P0DN76 240 aaPredicted RBP14.16□□□□□ -0.14
TRAPPC12-213ENST00000461577 U2AF1Q01081 240 aaKnown RBP eCLIP14.16□□□□□ -0.14
TRAPPC12-213ENST00000461577 R3HDM1Q15032 1099 aaKnown RBP14.16□□□□□ -0.14
TRAPPC12-213ENST00000461577 PROM2Q8N271 834 aa14.16□□□□□ -0.14
TRAPPC12-213ENST00000461577 TMOD3Q9NYL9 352 aa14.16□□□□□ -0.14
TRAPPC12-213ENST00000461577 AKAP4Q5JQC9 854 aa14.15□□□□□ -0.14
TRAPPC12-213ENST00000461577 DCAF5Q96JK2 942 aa14.15□□□□□ -0.14
TRAPPC12-213ENST00000461577 MYBBP1AQ9BQG0 1328 aaKnown RBP14.15□□□□□ -0.15
TRAPPC12-213ENST00000461577 ERVV-2B6SEH9 535 aa14.14□□□□□ -0.15
TRAPPC12-213ENST00000461577 SLC27A3Q5K4L6 730 aa14.14□□□□□ -0.15
TRAPPC12-213ENST00000461577 PIGBQ92521 554 aa14.14□□□□□ -0.15
TRAPPC12-213ENST00000461577 SMARCC1Q92922 1105 aaPredicted RBP14.14□□□□□ -0.15
TRAPPC12-213ENST00000461577 STK32BQ9NY57 414 aa14.14□□□□□ -0.15
TRAPPC12-213ENST00000461577 LY75O60449 1722 aa14.14□□□□□ -0.15
TRAPPC12-213ENST00000461577 MTHFSDQ2M296 383 aaKnown RBP14.13□□□□□ -0.15
TRAPPC12-213ENST00000461577 PRKAR2BP31323 418 aa14.12□□□□□ -0.15
TRAPPC12-213ENST00000461577 CABP4P57796 275 aa14.12□□□□□ -0.15
TRAPPC12-213ENST00000461577 GAS2L2Q8NHY3 880 aa14.12□□□□□ -0.15
TRAPPC12-213ENST00000461577 RSPH6AQ9H0K4 717 aa14.12□□□□□ -0.15
TRAPPC12-213ENST00000461577 CCNL1Q9UK58 526 aaPredicted RBP14.12□□□□□ -0.15
TRAPPC12-213ENST00000461577 VIRMAQ69YN4 1812 aaKnown RBP14.12□□□□□ -0.15
TRAPPC12-213ENST00000461577 KDM6AO15550 1401 aaPredicted RBP14.12□□□□□ -0.15
TRAPPC12-213ENST00000461577 SCN11AQ9UI33 1791 aa14.11□□□□□ -0.15
TRAPPC12-213ENST00000461577 PALLDQ8WX93 1383 aa14.11□□□□□ -0.15
TRAPPC12-213ENST00000461577 FCHSD2O94868 740 aa14.11□□□□□ -0.15
TRAPPC12-213ENST00000461577 NEFMP07197 916 aa14.11□□□□□ -0.15
TRAPPC12-213ENST00000461577 PRKRIP1Q9H875 184 aaPredicted RBP14.11□□□□□ -0.15
TRAPPC12-213ENST00000461577 ANO8Q9HCE9 1232 aaPredicted RBP14.11□□□□□ -0.15
TRAPPC12-213ENST00000461577 LRRC4BQ9NT99 713 aa14.11□□□□□ -0.15
TRAPPC12-213ENST00000461577 HMGB2P26583 209 aaKnown RBP14.1□□□□□ -0.15
TRAPPC12-213ENST00000461577 KCNQ4P56696 695 aa14.1□□□□□ -0.15
TRAPPC12-213ENST00000461577 SLC15A2Q16348 729 aa14.1□□□□□ -0.15
TRAPPC12-213ENST00000461577 PNNQ9H307 717 aaKnown RBP14.09□□□□□ -0.15
TRAPPC12-213ENST00000461577 ASAP1Q9ULH1 1129 aa14.09□□□□□ -0.15
TRAPPC12-213ENST00000461577 PAPPAQ13219 1627 aa14.08□□□□□ -0.15
TRAPPC12-213ENST00000461577 RNMTO43148 476 aaKnown RBP14.08□□□□□ -0.16
TRAPPC12-213ENST00000461577 PHACTR3Q96KR7 559 aa14.08□□□□□ -0.16
TRAPPC12-213ENST00000461577 LGR6Q9HBX8 967 aa14.08□□□□□ -0.16
TRAPPC12-213ENST00000461577 ATG3Q9NT62 314 aa14.08□□□□□ -0.16
TRAPPC12-213ENST00000461577 MAP3K5Q99683 1374 aa14.08□□□□□ -0.16
TRAPPC12-213ENST00000461577 GNAT3A8MTJ3 354 aa14.07□□□□□ -0.16
TRAPPC12-213ENST00000461577 NFATC2IPQ8NCF5 419 aa14.07□□□□□ -0.16
TRAPPC12-213ENST00000461577 LOC102724428A0A0B4J2F2 783 aa14.06□□□□□ -0.16
TRAPPC12-213ENST00000461577 SIK1P57059 783 aa14.06□□□□□ -0.16
TRAPPC12-213ENST00000461577 RBM42Q9BTD8 480 aaKnown RBP14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms