RNA–Protein interactions for RNA: ENST00000461574.1

BRCA1-206, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-206ENST00000461574 PRDM15P57071 1507 aaPredicted RBP7.98□□□□□ -1.13
BRCA1-206ENST00000461574 EFCAB6Q5THR3 1501 aa7.98□□□□□ -1.13
BRCA1-206ENST00000461574 TMEM94Q12767 1356 aa7.97□□□□□ -1.13
BRCA1-206ENST00000461574 LTKP29376 864 aa7.97□□□□□ -1.13
BRCA1-206ENST00000461574 THAP11Q96EK4 314 aa7.97□□□□□ -1.13
BRCA1-206ENST00000461574 BCANQ96GW7 911 aa7.97□□□□□ -1.13
BRCA1-206ENST00000461574 PHOX2BQ99453 314 aa7.97□□□□□ -1.13
BRCA1-206ENST00000461574 PKD2L1Q9P0L9 805 aa7.97□□□□□ -1.13
BRCA1-206ENST00000461574 CROCC2H7BZ55 1655 aa7.97□□□□□ -1.13
BRCA1-206ENST00000461574 FOXC1Q12948 553 aa7.96□□□□□ -1.14
BRCA1-206ENST00000461574 PROSER2Q86WR7 435 aaPredicted RBP7.96□□□□□ -1.14
BRCA1-206ENST00000461574 MAP3K1Q13233 1512 aa7.96□□□□□ -1.14
BRCA1-206ENST00000461574 MSH6P52701 1360 aa7.96□□□□□ -1.14
BRCA1-206ENST00000461574 KANK1Q14678 1352 aa7.96□□□□□ -1.14
BRCA1-206ENST00000461574 TMEM2Q9UHN6 1383 aa7.96□□□□□ -1.14
BRCA1-206ENST00000461574 NKTRP30414 1462 aaKnown RBP7.95□□□□□ -1.14
BRCA1-206ENST00000461574 ST8SIA5O15466 376 aa7.95□□□□□ -1.14
BRCA1-206ENST00000461574 MEX3CQ5U5Q3 659 aaKnown RBP7.95□□□□□ -1.14
BRCA1-206ENST00000461574 FAM160A2Q8N612 972 aaPredicted RBP7.95□□□□□ -1.14
BRCA1-206ENST00000461574 SLC27A5Q9Y2P5 690 aa7.95□□□□□ -1.14
BRCA1-206ENST00000461574 FCF1Q9Y324 198 aaKnown RBP7.95□□□□□ -1.14
BRCA1-206ENST00000461574 ARHGAP31Q2M1Z3 1444 aa7.95□□□□□ -1.14
BRCA1-206ENST00000461574 NWD1Q149M9 1564 aa7.94□□□□□ -1.14
BRCA1-206ENST00000461574 ATP6V1AP38606 617 aa7.94□□□□□ -1.14
BRCA1-206ENST00000461574 GCGRP47871 477 aa7.94□□□□□ -1.14
BRCA1-206ENST00000461574 SLC26A8Q96RN1 970 aa7.94□□□□□ -1.14
BRCA1-206ENST00000461574 KIF15Q9NS87 1388 aa7.94□□□□□ -1.14
BRCA1-206ENST00000461574 JCADQ9P266 1359 aa7.94□□□□□ -1.14
BRCA1-206ENST00000461574 ERBINQ96RT1 1412 aa7.94□□□□□ -1.14
BRCA1-206ENST00000461574 ADGRB3O60242 1522 aa7.93□□□□□ -1.14
BRCA1-206ENST00000461574 COL16A1Q07092 1604 aaPredicted RBP7.93□□□□□ -1.14
BRCA1-206ENST00000461574 FMNL1O95466 1100 aaPredicted RBP7.93□□□□□ -1.14
BRCA1-206ENST00000461574 KCNA6P17658 529 aa7.93□□□□□ -1.14
BRCA1-206ENST00000461574 RPIAP49247 311 aa7.93□□□□□ -1.14
BRCA1-206ENST00000461574 PLCB2Q00722 1185 aa7.93□□□□□ -1.14
BRCA1-206ENST00000461574 TRIM52Q96A61 297 aa7.93□□□□□ -1.14
BRCA1-206ENST00000461574 PRDM9Q9NQV7 894 aa7.93□□□□□ -1.14
BRCA1-206ENST00000461574 AAASQ9NRG9 546 aa7.93□□□□□ -1.14
BRCA1-206ENST00000461574 MYOM3Q5VTT5 1437 aa7.93□□□□□ -1.14
BRCA1-206ENST00000461574 MYO5BQ9ULV0 1848 aa7.92□□□□□ -1.14
BRCA1-206ENST00000461574 C14orf37Q86TY3 774 aa7.92□□□□□ -1.14
BRCA1-206ENST00000461574 TET3O43151 1660 aa7.92□□□□□ -1.14
BRCA1-206ENST00000461574 SHPRHQ149N8 1683 aa7.92□□□□□ -1.14
BRCA1-206ENST00000461574 CHD2O14647 1828 aaKnown RBP7.92□□□□□ -1.14
BRCA1-206ENST00000461574 PPP1R15AO75807 674 aaPredicted RBP7.91□□□□□ -1.14
BRCA1-206ENST00000461574 ZNF772Q68DY9 489 aaPredicted RBP7.91□□□□□ -1.14
BRCA1-206ENST00000461574 LMOD2Q6P5Q4 547 aa7.91□□□□□ -1.14
BRCA1-206ENST00000461574 BRICD5Q6PL45 260 aa7.91□□□□□ -1.14
BRCA1-206ENST00000461574 SULF1Q8IWU6 871 aa7.91□□□□□ -1.14
BRCA1-206ENST00000461574 RRP7BPQ9NSQ0 103 aa7.91□□□□□ -1.14
BRCA1-206ENST00000461574 SLAIN2Q9P270 581 aa7.91□□□□□ -1.14
BRCA1-206ENST00000461574 GCC2Q8IWJ2 1684 aa7.91□□□□□ -1.14
BRCA1-206ENST00000461574 SRCAPQ6ZRS2 3230 aa7.9□□□□□ -1.14
BRCA1-206ENST00000461574 PTPN23Q9H3S7 1636 aa7.9□□□□□ -1.14
BRCA1-206ENST00000461574 SPATA31A6Q5VVP1 1343 aa7.9□□□□□ -1.14
BRCA1-206ENST00000461574 CD2BP2O95400 341 aaKnown RBP7.9□□□□□ -1.14
BRCA1-206ENST00000461574 RNF19BQ6ZMZ0 732 aa7.9□□□□□ -1.14
BRCA1-206ENST00000461574 LRP6O75581 1613 aa7.89□□□□□ -1.15
BRCA1-206ENST00000461574 IDI1Q13907 227 aa7.89□□□□□ -1.15
BRCA1-206ENST00000461574 GPIHBP1Q8IV16 184 aa7.89□□□□□ -1.15
BRCA1-206ENST00000461574 TOR4AQ9NXH8 423 aa7.89□□□□□ -1.15
BRCA1-206ENST00000461574 DACH1Q9UI36 760 aa7.89□□□□□ -1.15
BRCA1-206ENST00000461574 SALL2Q9Y467 1007 aaPredicted RBP7.89□□□□□ -1.15
BRCA1-206ENST00000461574 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.89□□□□□ -1.15
BRCA1-206ENST00000461574 LMTK2Q8IWU2 1503 aa7.88□□□□□ -1.15
BRCA1-206ENST00000461574 FGD6Q6ZV73 1430 aa7.88□□□□□ -1.15
BRCA1-206ENST00000461574 VPS8Q8N3P4 1428 aa7.88□□□□□ -1.15
BRCA1-206ENST00000461574 AHDC1Q5TGY3 1603 aaPredicted RBP7.88□□□□□ -1.15
BRCA1-206ENST00000461574 ATF3P18847 181 aa7.87□□□□□ -1.15
BRCA1-206ENST00000461574 RXRBP28702 533 aa7.87□□□□□ -1.15
BRCA1-206ENST00000461574 CYP4X1Q8N118 509 aa7.87□□□□□ -1.15
BRCA1-206ENST00000461574 ABCC5O15440 1437 aa7.86□□□□□ -1.15
BRCA1-206ENST00000461574 DAPK1P53355 1430 aa7.86□□□□□ -1.15
BRCA1-206ENST00000461574 ANKRD30AQ9BXX3 1397 aa7.86□□□□□ -1.15
BRCA1-206ENST00000461574 PLEKHG1Q9ULL1 1385 aa7.86□□□□□ -1.15
BRCA1-206ENST00000461574 NUTM2BA6NNL0 878 aaPredicted RBP7.86□□□□□ -1.15
BRCA1-206ENST00000461574 NUTM2EB1AL46 878 aaPredicted RBP7.86□□□□□ -1.15
BRCA1-206ENST00000461574 AVPP01185 164 aa7.86□□□□□ -1.15
BRCA1-206ENST00000461574 MSS51Q4VC12 460 aa7.86□□□□□ -1.15
BRCA1-206ENST00000461574 NUTM2AQ8IVF1 878 aaPredicted RBP7.86□□□□□ -1.15
BRCA1-206ENST00000461574 CRIPAKQ8N1N5 446 aa7.86□□□□□ -1.15
BRCA1-206ENST00000461574 SLC52A1Q9NWF4 448 aa7.86□□□□□ -1.15
BRCA1-206ENST00000461574 NOS1P29475 1434 aa7.86□□□□□ -1.15
BRCA1-206ENST00000461574 RIMS2Q9UQ26 1411 aa7.86□□□□□ -1.15
BRCA1-206ENST00000461574 DIP2AQ14689 1571 aa7.85□□□□□ -1.15
BRCA1-206ENST00000461574 KANK4Q5T7N3 995 aaPredicted RBP7.85□□□□□ -1.15
BRCA1-206ENST00000461574 CHIC2Q9UKJ5 165 aa7.85□□□□□ -1.15
BRCA1-206ENST00000461574 CDK12Q9NYV4 1490 aaPredicted RBP7.85□□□□□ -1.15
BRCA1-206ENST00000461574 TMEM131LA2VDJ0 1609 aa7.85□□□□□ -1.15
BRCA1-206ENST00000461574 RPRD2Q5VT52 1461 aaKnown RBP7.84□□□□□ -1.15
BRCA1-206ENST00000461574 ZBTB24O43167 697 aaPredicted RBP7.84□□□□□ -1.15
BRCA1-206ENST00000461574 CD46P15529 392 aa7.84□□□□□ -1.15
BRCA1-206ENST00000461574 GRIPAP1Q4V328 841 aa7.84□□□□□ -1.15
BRCA1-206ENST00000461574 ZFYVE9O95405 1425 aa7.84□□□□□ -1.15
BRCA1-206ENST00000461574 NCOA3Q9Y6Q9 1424 aa7.84□□□□□ -1.15
BRCA1-206ENST00000461574 TRPM2O94759 1503 aa7.83□□□□□ -1.16
BRCA1-206ENST00000461574 AFF2P51816 1311 aa7.83□□□□□ -1.16
BRCA1-206ENST00000461574 NHSL1Q5SYE7 1610 aa7.83□□□□□ -1.16
BRCA1-206ENST00000461574 AXIN1O15169 862 aa7.83□□□□□ -1.16
BRCA1-206ENST00000461574 KDM2AQ9Y2K7 1162 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms