RNA–Protein interactions for RNA: ENST00000461173.5

DHFR2-203, Transcript of dihydrofolate reductase 2, humanhuman

TSL 1 (best)

Gene DHFR2, Length 1,831 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR2-203ENST00000461173 RGS12O14924 1447 aa12.37□□□□□ -0.43
DHFR2-203ENST00000461173 CEP170BQ9Y4F5 1589 aaPredicted RBP12.37□□□□□ -0.43
DHFR2-203ENST00000461173 ANTXR1Q9H6X2 564 aa12.37□□□□□ -0.43
DHFR2-203ENST00000461173 RTL1A6NKG5 1358 aa12.36□□□□□ -0.43
DHFR2-203ENST00000461173 SIRT2Q8IXJ6 389 aa12.36□□□□□ -0.43
DHFR2-203ENST00000461173 RPAP2Q8IXW5 612 aaPredicted RBP12.36□□□□□ -0.43
DHFR2-203ENST00000461173 TBC1D2Q9BYX2 928 aa12.36□□□□□ -0.43
DHFR2-203ENST00000461173 DCTPP1Q9H773 170 aa12.35□□□□□ -0.43
DHFR2-203ENST00000461173 DCTN1Q14203 1278 aa12.34□□□□□ -0.43
DHFR2-203ENST00000461173 GSE1Q14687 1217 aa12.34□□□□□ -0.43
DHFR2-203ENST00000461173 SNX21Q969T3 373 aa12.34□□□□□ -0.43
DHFR2-203ENST00000461173 LNPKQ9C0E8 428 aa12.34□□□□□ -0.43
DHFR2-203ENST00000461173 LRRC37A3O60309 1634 aa12.34□□□□□ -0.43
DHFR2-203ENST00000461173 ELL2O00472 640 aaPredicted RBP12.34□□□□□ -0.43
DHFR2-203ENST00000461173 ANKRD45Q5TZF3 282 aa12.34□□□□□ -0.43
DHFR2-203ENST00000461173 ANKRD44Q8N8A2 993 aa12.34□□□□□ -0.43
DHFR2-203ENST00000461173 RTF1Q92541 710 aaKnown RBP12.34□□□□□ -0.43
DHFR2-203ENST00000461173 AMPHP49418 695 aa12.33□□□□□ -0.44
DHFR2-203ENST00000461173 ZNF142P52746 1687 aaPredicted RBP12.33□□□□□ -0.44
DHFR2-203ENST00000461173 ATP10DQ9P241 1426 aa12.33□□□□□ -0.44
DHFR2-203ENST00000461173 RGPD8O14715 1765 aaPredicted RBP12.33□□□□□ -0.44
DHFR2-203ENST00000461173 KCNA4P22459 653 aa12.32□□□□□ -0.44
DHFR2-203ENST00000461173 MTHFSDQ2M296 383 aaKnown RBP12.32□□□□□ -0.44
DHFR2-203ENST00000461173 EYA1Q99502 592 aa12.32□□□□□ -0.44
DHFR2-203ENST00000461173 MARF1Q9Y4F3 1742 aaKnown RBP12.32□□□□□ -0.44
DHFR2-203ENST00000461173 NWD1Q149M9 1564 aa12.32□□□□□ -0.44
DHFR2-203ENST00000461173 CACNA1FO60840 1977 aa12.32□□□□□ -0.44
DHFR2-203ENST00000461173 KCNA6P17658 529 aa12.32□□□□□ -0.44
DHFR2-203ENST00000461173 MFAP1P55081 439 aaKnown RBP12.32□□□□□ -0.44
DHFR2-203ENST00000461173 MCM10Q7L590 875 aa12.32□□□□□ -0.44
DHFR2-203ENST00000461173 CHD2O14647 1828 aaKnown RBP12.31□□□□□ -0.44
DHFR2-203ENST00000461173 NUTM2FA1L443 756 aa12.31□□□□□ -0.44
DHFR2-203ENST00000461173 CCT4P50991 539 aaKnown RBP12.31□□□□□ -0.44
DHFR2-203ENST00000461173 NCOA3Q9Y6Q9 1424 aa12.31□□□□□ -0.44
DHFR2-203ENST00000461173 FRAT2O75474 233 aaPredicted RBP12.3□□□□□ -0.44
DHFR2-203ENST00000461173 HOXC9P31274 260 aa12.3□□□□□ -0.44
DHFR2-203ENST00000461173 NLRP6P59044 892 aa12.3□□□□□ -0.44
DHFR2-203ENST00000461173 ANKLE2Q86XL3 938 aa12.3□□□□□ -0.44
DHFR2-203ENST00000461173 TSPYL4Q9UJ04 414 aa12.3□□□□□ -0.44
DHFR2-203ENST00000461173 PHRF1Q9P1Y6 1649 aaKnown RBP12.3□□□□□ -0.44
DHFR2-203ENST00000461173 SETD1BQ9UPS6 1966 aaKnown RBP12.29□□□□□ -0.44
DHFR2-203ENST00000461173 HMMRO75330 724 aa12.29□□□□□ -0.44
DHFR2-203ENST00000461173 CEP85Q6P2H3 762 aa12.29□□□□□ -0.44
DHFR2-203ENST00000461173 HSCBQ8IWL3 235 aa12.29□□□□□ -0.44
DHFR2-203ENST00000461173 CHMP4AQ9BY43 222 aa12.29□□□□□ -0.44
DHFR2-203ENST00000461173 C1orf115Q9H7X2 142 aa12.29□□□□□ -0.44
DHFR2-203ENST00000461173 GNAT3A8MTJ3 354 aa12.28□□□□□ -0.44
DHFR2-203ENST00000461173 CDC45O75419 566 aa12.28□□□□□ -0.44
DHFR2-203ENST00000461173 PIAS4Q8N2W9 510 aaPredicted RBP12.28□□□□□ -0.44
DHFR2-203ENST00000461173 CHMP5Q9NZZ3 219 aa12.28□□□□□ -0.44
DHFR2-203ENST00000461173 CIZ1Q9ULV3 898 aaPredicted RBP12.28□□□□□ -0.44
DHFR2-203ENST00000461173 ADGRL3Q9HAR2 1447 aa12.28□□□□□ -0.44
DHFR2-203ENST00000461173 MAP3K5Q99683 1374 aa12.28□□□□□ -0.44
DHFR2-203ENST00000461173 SLC4A2P04920 1241 aa12.27□□□□□ -0.44
DHFR2-203ENST00000461173 PLEKHM2Q8IWE5 1019 aa12.27□□□□□ -0.44
DHFR2-203ENST00000461173 PHF8Q9UPP1 1060 aa12.27□□□□□ -0.44
DHFR2-203ENST00000461173 PXDNLA1KZ92 1463 aa12.27□□□□□ -0.45
DHFR2-203ENST00000461173 MSH6P52701 1360 aa12.27□□□□□ -0.45
DHFR2-203ENST00000461173 CCDC30Q5VVM6 783 aa12.27□□□□□ -0.45
DHFR2-203ENST00000461173 TBC1D9Q6ZT07 1266 aa12.27□□□□□ -0.45
DHFR2-203ENST00000461173 KRT24Q2M2I5 525 aa12.26□□□□□ -0.45
DHFR2-203ENST00000461173 ABTB2Q8N961 1025 aa12.26□□□□□ -0.45
DHFR2-203ENST00000461173 UBE2Q2Q8WVN8 375 aa12.26□□□□□ -0.45
DHFR2-203ENST00000461173 IP6K1Q92551 441 aa12.26□□□□□ -0.45
DHFR2-203ENST00000461173 STK31Q9BXU1 1019 aa12.26□□□□□ -0.45
DHFR2-203ENST00000461173 NFAT5O94916 1531 aa12.26□□□□□ -0.45
DHFR2-203ENST00000461173 N4BP2Q86UW6 1770 aaPredicted RBP12.26□□□□□ -0.45
DHFR2-203ENST00000461173 FOXO3O43524 673 aa12.25□□□□□ -0.45
DHFR2-203ENST00000461173 HOXB7P09629 217 aa12.25□□□□□ -0.45
DHFR2-203ENST00000461173 DDIT3P35638 169 aa12.25□□□□□ -0.45
DHFR2-203ENST00000461173 TTC22Q5TAA0 569 aa12.25□□□□□ -0.45
DHFR2-203ENST00000461173 KCNH5Q8NCM2 988 aa12.25□□□□□ -0.45
DHFR2-203ENST00000461173 SLKQ9H2G2 1235 aaPredicted RBP12.25□□□□□ -0.45
DHFR2-203ENST00000461173 OSBPL3Q9H4L5 887 aa12.25□□□□□ -0.45
DHFR2-203ENST00000461173 CEMIPQ8WUJ3 1361 aa12.25□□□□□ -0.45
DHFR2-203ENST00000461173 LMTK3Q96Q04 1460 aa12.25□□□□□ -0.45
DHFR2-203ENST00000461173 TAF7Q15545 349 aaPredicted RBP12.25□□□□□ -0.45
DHFR2-203ENST00000461173 MED1Q15648 1581 aaPredicted RBP12.24□□□□□ -0.45
DHFR2-203ENST00000461173 GNAI3P08754 354 aa12.24□□□□□ -0.45
DHFR2-203ENST00000461173 KIF2CQ99661 725 aa12.24□□□□□ -0.45
DHFR2-203ENST00000461173 MEIS3Q99687 375 aa12.24□□□□□ -0.45
DHFR2-203ENST00000461173 NCAPD2Q15021 1401 aa12.24□□□□□ -0.45
DHFR2-203ENST00000461173 FAM208AQ9UK61 1670 aaKnown RBP12.24□□□□□ -0.45
DHFR2-203ENST00000461173 GSPT1P15170 499 aaKnown RBP12.23□□□□□ -0.45
DHFR2-203ENST00000461173 ADAMTSL3P82987 1691 aa12.23□□□□□ -0.45
DHFR2-203ENST00000461173 OVOS2A0A0G2JMS6 1433 aa12.23□□□□□ -0.45
DHFR2-203ENST00000461173 MST1RQ04912 1400 aa12.23□□□□□ -0.45
DHFR2-203ENST00000461173 SOX12O15370 315 aa12.23□□□□□ -0.45
DHFR2-203ENST00000461173 GNAI2P04899 355 aa12.23□□□□□ -0.45
DHFR2-203ENST00000461173 IL17REQ8NFR9 667 aa12.23□□□□□ -0.45
DHFR2-203ENST00000461173 FLIIQ13045 1269 aa12.22□□□□□ -0.45
DHFR2-203ENST00000461173 MCM4P33991 863 aa12.21□□□□□ -0.45
DHFR2-203ENST00000461173 CASC1Q6TDU7 716 aa12.21□□□□□ -0.45
DHFR2-203ENST00000461173 HOMEZQ8IX15 550 aa12.21□□□□□ -0.45
DHFR2-203ENST00000461173 IL27Q8NEV9 243 aa12.21□□□□□ -0.45
DHFR2-203ENST00000461173 LTN1O94822 1766 aa12.21□□□□□ -0.45
DHFR2-203ENST00000461173 SLIT3O75094 1523 aa12.21□□□□□ -0.46
DHFR2-203ENST00000461173 PTMSP20962 102 aa12.21□□□□□ -0.46
DHFR2-203ENST00000461173 RABEP1Q15276 862 aa12.21□□□□□ -0.46
DHFR2-203ENST00000461173 G2E3Q7L622 706 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms