RNA–Protein interactions for RNA: ENST00000460827.1

PCYT1A-213, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

TSL 2

Gene PCYT1A, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-213ENST00000460827 LY75O60449 1722 aa16.72■□□□□ 0.27
PCYT1A-213ENST00000460827 L3MBTL2Q969R5 705 aa16.71■□□□□ 0.27
PCYT1A-213ENST00000460827 TFCP2L1Q9NZI6 479 aa16.71■□□□□ 0.27
PCYT1A-213ENST00000460827 SBNO2Q9Y2G9 1366 aa16.71■□□□□ 0.27
PCYT1A-213ENST00000460827 CD163L1Q9NR16 1453 aa16.71■□□□□ 0.27
PCYT1A-213ENST00000460827 DOT1LQ8TEK3 1739 aa16.68■□□□□ 0.26
PCYT1A-213ENST00000460827 NSD2O96028 1365 aa16.68■□□□□ 0.26
PCYT1A-213ENST00000460827 GRIN3BO60391 1043 aa16.68■□□□□ 0.26
PCYT1A-213ENST00000460827 DDX54Q8TDD1 881 aaKnown RBP16.68■□□□□ 0.26
PCYT1A-213ENST00000460827 PRIM1P49642 420 aaKnown RBP16.67■□□□□ 0.26
PCYT1A-213ENST00000460827 ROCK2O75116 1388 aaKnown RBP16.66■□□□□ 0.26
PCYT1A-213ENST00000460827 ANKRD36BQ8N2N9 1353 aa16.66■□□□□ 0.26
PCYT1A-213ENST00000460827 FAM208AQ9UK61 1670 aaKnown RBP16.66■□□□□ 0.26
PCYT1A-213ENST00000460827 ATP10DQ9P241 1426 aa16.66■□□□□ 0.26
PCYT1A-213ENST00000460827 COL23A1Q86Y22 540 aaPredicted RBP16.64■□□□□ 0.25
PCYT1A-213ENST00000460827 IP6K1Q92551 441 aa16.64■□□□□ 0.25
PCYT1A-213ENST00000460827 SYTL4Q96C24 671 aaPredicted RBP16.64■□□□□ 0.25
PCYT1A-213ENST00000460827 RGPD2P0DJD1 1756 aa16.64■□□□□ 0.25
PCYT1A-213ENST00000460827 EDC4Q6P2E9 1401 aaKnown RBP16.63■□□□□ 0.25
PCYT1A-213ENST00000460827 SLC12A5Q9H2X9 1139 aa16.62■□□□□ 0.25
PCYT1A-213ENST00000460827 CCNL1Q9UK58 526 aaPredicted RBP16.62■□□□□ 0.25
PCYT1A-213ENST00000460827 PCNTO95613 3336 aa16.62■□□□□ 0.25
PCYT1A-213ENST00000460827 ADCY9O60503 1353 aa16.62■□□□□ 0.25
PCYT1A-213ENST00000460827 MSL1Q68DK7 614 aa16.61■□□□□ 0.25
PCYT1A-213ENST00000460827 LTV1Q96GA3 475 aaPredicted RBP16.61■□□□□ 0.25
PCYT1A-213ENST00000460827 MEGF6O75095 1541 aa16.6■□□□□ 0.25
PCYT1A-213ENST00000460827 TAF1LQ8IZX4 1826 aa16.59■□□□□ 0.25
PCYT1A-213ENST00000460827 HSPA6P17066 643 aa16.59■□□□□ 0.25
PCYT1A-213ENST00000460827 HDGFL2Q7Z4V5 671 aaPredicted RBP16.59■□□□□ 0.25
PCYT1A-213ENST00000460827 ZCRB1Q8TBF4 217 aaKnown RBP16.59■□□□□ 0.25
PCYT1A-213ENST00000460827 TMC1Q8TDI8 760 aa16.59■□□□□ 0.25
PCYT1A-213ENST00000460827 GPBP1L1Q9HC44 474 aaPredicted RBP16.59■□□□□ 0.25
PCYT1A-213ENST00000460827 CD2APQ9Y5K6 639 aa16.59■□□□□ 0.25
PCYT1A-213ENST00000460827 A0A1W2PP64 1363 aa16.59■□□□□ 0.25
PCYT1A-213ENST00000460827 C5P01031 1676 aa16.59■□□□□ 0.25
PCYT1A-213ENST00000460827 SIN3AQ96ST3 1273 aa16.58■□□□□ 0.24
PCYT1A-213ENST00000460827 MAP3K19Q56UN5 1328 aa16.57■□□□□ 0.24
PCYT1A-213ENST00000460827 USP47Q96K76 1375 aa16.56■□□□□ 0.24
PCYT1A-213ENST00000460827 HOXC9P31274 260 aa16.56■□□□□ 0.24
PCYT1A-213ENST00000460827 FBLN1P23142 703 aa16.55■□□□□ 0.24
PCYT1A-213ENST00000460827 ZNF526Q8TF50 670 aaPredicted RBP16.55■□□□□ 0.24
PCYT1A-213ENST00000460827 TERF2IPQ9NYB0 399 aa16.55■□□□□ 0.24
PCYT1A-213ENST00000460827 TOGARAM1Q9Y4F4 1720 aa16.53■□□□□ 0.24
PCYT1A-213ENST00000460827 NBPF6Q5VWK0 638 aa16.52■□□□□ 0.24
PCYT1A-213ENST00000460827 AMIGO3Q86WK7 504 aa16.52■□□□□ 0.24
PCYT1A-213ENST00000460827 FLAD1Q8NFF5 587 aa16.52■□□□□ 0.24
PCYT1A-213ENST00000460827 NBPF4Q96M43 638 aa16.52■□□□□ 0.24
PCYT1A-213ENST00000460827 UBR3Q6ZT12 1888 aa16.52■□□□□ 0.23
PCYT1A-213ENST00000460827 C4BP0C0L5 1744 aa16.51■□□□□ 0.23
PCYT1A-213ENST00000460827 AMPHP49418 695 aa16.51■□□□□ 0.23
PCYT1A-213ENST00000460827 NEUROD1Q13562 356 aa16.51■□□□□ 0.23
PCYT1A-213ENST00000460827 PUS7Q96PZ0 661 aaKnown RBP16.51■□□□□ 0.23
PCYT1A-213ENST00000460827 CGNL1Q0VF96 1302 aa16.5■□□□□ 0.23
PCYT1A-213ENST00000460827 ITGB4P16144 1822 aa16.5■□□□□ 0.23
PCYT1A-213ENST00000460827 KIF3CO14782 793 aa16.5■□□□□ 0.23
PCYT1A-213ENST00000460827 COG3Q96JB2 828 aa16.5■□□□□ 0.23
PCYT1A-213ENST00000460827 CARD11Q9BXL7 1154 aa16.5■□□□□ 0.23
PCYT1A-213ENST00000460827 PALLDQ8WX93 1383 aa16.5■□□□□ 0.23
PCYT1A-213ENST00000460827 IGSF1Q8N6C5 1336 aa16.49■□□□□ 0.23
PCYT1A-213ENST00000460827 USHBP1Q8N6Y0 703 aa16.49■□□□□ 0.23
PCYT1A-213ENST00000460827 RTL1A6NKG5 1358 aa16.49■□□□□ 0.23
PCYT1A-213ENST00000460827 WWC3Q9ULE0 1092 aa16.48■□□□□ 0.23
PCYT1A-213ENST00000460827 SMIM5Q71RC9 77 aa16.47■□□□□ 0.23
PCYT1A-213ENST00000460827 CICQ96RK0 1608 aaPredicted RBP16.47■□□□□ 0.23
PCYT1A-213ENST00000460827 MAP2P11137 1827 aaKnown RBP16.47■□□□□ 0.23
PCYT1A-213ENST00000460827 RRS1Q15050 365 aaKnown RBP16.46■□□□□ 0.23
PCYT1A-213ENST00000460827 RAPGEF4Q8WZA2 1011 aa16.46■□□□□ 0.23
PCYT1A-213ENST00000460827 CYP27B1O15528 508 aa16.45■□□□□ 0.22
PCYT1A-213ENST00000460827 HMGB2P26583 209 aaKnown RBP16.45■□□□□ 0.22
PCYT1A-213ENST00000460827 MPRIPQ6WCQ1 1025 aa16.45■□□□□ 0.22
PCYT1A-213ENST00000460827 AK7Q96M32 723 aa16.45■□□□□ 0.22
PCYT1A-213ENST00000460827 PCDH11XQ9BZA7 1347 aa16.45■□□□□ 0.22
PCYT1A-213ENST00000460827 PCDH11YQ9BZA8 1340 aa16.45■□□□□ 0.22
PCYT1A-213ENST00000460827 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.44■□□□□ 0.22
PCYT1A-213ENST00000460827 TATP17735 454 aaPredicted RBP16.44■□□□□ 0.22
PCYT1A-213ENST00000460827 DNAJC5GQ8N7S2 189 aa16.44■□□□□ 0.22
PCYT1A-213ENST00000460827 U3KPZ7 1027 aaPredicted RBP16.44■□□□□ 0.22
PCYT1A-213ENST00000460827 PHF14O94880 888 aa16.43■□□□□ 0.22
PCYT1A-213ENST00000460827 APLP1P51693 650 aa16.43■□□□□ 0.22
PCYT1A-213ENST00000460827 TESK2Q96S53 571 aa16.43■□□□□ 0.22
PCYT1A-213ENST00000460827 KIF13BQ9NQT8 1826 aa16.42■□□□□ 0.22
PCYT1A-213ENST00000460827 KIAA1551Q9HCM1 1747 aa16.42■□□□□ 0.22
PCYT1A-213ENST00000460827 SMARCC1Q92922 1105 aaPredicted RBP16.42■□□□□ 0.22
PCYT1A-213ENST00000460827 NSD3Q9BZ95 1437 aa16.42■□□□□ 0.22
PCYT1A-213ENST00000460827 PKD1L3Q7Z443 1732 aa16.42■□□□□ 0.22
PCYT1A-213ENST00000460827 FYB1O15117 783 aa16.41■□□□□ 0.22
PCYT1A-213ENST00000460827 SSFA2P28290 1259 aa16.41■□□□□ 0.22
PCYT1A-213ENST00000460827 HSP90AB2PQ58FF8 381 aa16.41■□□□□ 0.22
PCYT1A-213ENST00000460827 PIGBQ92521 554 aa16.41■□□□□ 0.22
PCYT1A-213ENST00000460827 SMG6Q86US8 1419 aaKnown RBP16.41■□□□□ 0.22
PCYT1A-213ENST00000460827 INSRP06213 1382 aa16.4■□□□□ 0.22
PCYT1A-213ENST00000460827 LINC00116Q8NCU8 138 aa16.4■□□□□ 0.22
PCYT1A-213ENST00000460827 N4BP2Q86UW6 1770 aaPredicted RBP16.39■□□□□ 0.21
PCYT1A-213ENST00000460827 GGNBP2Q9H3C7 697 aa16.39■□□□□ 0.21
PCYT1A-213ENST00000460827 PXDNLA1KZ92 1463 aa16.39■□□□□ 0.21
PCYT1A-213ENST00000460827 LOC102724428A0A0B4J2F2 783 aa16.38■□□□□ 0.21
PCYT1A-213ENST00000460827 TOMM70O94826 608 aa16.38■□□□□ 0.21
PCYT1A-213ENST00000460827 SIK1P57059 783 aa16.38■□□□□ 0.21
PCYT1A-213ENST00000460827 ST20-MTHFSA0A0A6YYL1 179 aa16.37■□□□□ 0.21
PCYT1A-213ENST00000460827 NKX1-1Q15270 411 aaPredicted RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms