RNA–Protein interactions for RNA: ENST00000460808.5

TGFA-208, Transcript of transforming growth factor alpha, humanhuman

TSL 4

Gene TGFA, Length 470 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFA-208ENST00000460808 DOT1LQ8TEK3 1739 aa16.4■□□□□ 0.22
TGFA-208ENST00000460808 KCNQ2O43526 872 aa16.4■□□□□ 0.22
TGFA-208ENST00000460808 LRP5O75197 1615 aa16.39■□□□□ 0.21
TGFA-208ENST00000460808 USHBP1Q8N6Y0 703 aa16.39■□□□□ 0.21
TGFA-208ENST00000460808 NPC1L1Q9UHC9 1359 aa16.38■□□□□ 0.21
TGFA-208ENST00000460808 PAPPAQ13219 1627 aa16.37■□□□□ 0.21
TGFA-208ENST00000460808 TOGARAM1Q9Y4F4 1720 aa16.37■□□□□ 0.21
TGFA-208ENST00000460808 EIF4A2Q14240 407 aaKnown RBP16.36■□□□□ 0.21
TGFA-208ENST00000460808 ZCRB1Q8TBF4 217 aaKnown RBP16.36■□□□□ 0.21
TGFA-208ENST00000460808 EYA1Q99502 592 aa16.36■□□□□ 0.21
TGFA-208ENST00000460808 KNSTRNQ9Y448 316 aa16.36■□□□□ 0.21
TGFA-208ENST00000460808 PLEKHG2Q9H7P9 1386 aa16.36■□□□□ 0.21
TGFA-208ENST00000460808 LY75O60449 1722 aa16.36■□□□□ 0.21
TGFA-208ENST00000460808 IGSF1Q8N6C5 1336 aa16.35■□□□□ 0.21
TGFA-208ENST00000460808 CASZ1Q86V15 1759 aa16.34■□□□□ 0.21
TGFA-208ENST00000460808 TNNT2P45379 298 aaPredicted RBP16.34■□□□□ 0.21
TGFA-208ENST00000460808 KAT6BQ8WYB5 2073 aa16.34■□□□□ 0.21
TGFA-208ENST00000460808 ITGB4P16144 1822 aa16.33■□□□□ 0.21
TGFA-208ENST00000460808 PSDA5PKW4 1024 aaPredicted RBP16.33■□□□□ 0.2
TGFA-208ENST00000460808 PPM1GO15355 546 aaPredicted RBP16.33■□□□□ 0.2
TGFA-208ENST00000460808 CYP27B1O15528 508 aa16.33■□□□□ 0.2
TGFA-208ENST00000460808 MORC1Q86VD1 984 aa16.33■□□□□ 0.2
TGFA-208ENST00000460808 DDX54Q8TDD1 881 aaKnown RBP16.33■□□□□ 0.2
TGFA-208ENST00000460808 RAPGEF4Q8WZA2 1011 aa16.33■□□□□ 0.2
TGFA-208ENST00000460808 ACSBG1Q96GR2 724 aa16.33■□□□□ 0.2
TGFA-208ENST00000460808 R3HDM1Q15032 1099 aaKnown RBP16.32■□□□□ 0.2
TGFA-208ENST00000460808 ANO8Q9HCE9 1232 aaPredicted RBP16.32■□□□□ 0.2
TGFA-208ENST00000460808 KDRP35968 1356 aa16.31■□□□□ 0.2
TGFA-208ENST00000460808 TATP17735 454 aaPredicted RBP16.31■□□□□ 0.2
TGFA-208ENST00000460808 TXNRD1Q16881 649 aa16.31■□□□□ 0.2
TGFA-208ENST00000460808 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.31■□□□□ 0.2
TGFA-208ENST00000460808 PCDH11XQ9BZA7 1347 aa16.3■□□□□ 0.2
TGFA-208ENST00000460808 PCDH11YQ9BZA8 1340 aa16.3■□□□□ 0.2
TGFA-208ENST00000460808 NKX1-1Q15270 411 aaPredicted RBP16.3■□□□□ 0.2
TGFA-208ENST00000460808 COL3A1P02461 1466 aaPredicted RBP16.29■□□□□ 0.2
TGFA-208ENST00000460808 QSER1Q2KHR3 1735 aa16.28■□□□□ 0.2
TGFA-208ENST00000460808 IL13P35225 146 aa16.28■□□□□ 0.2
TGFA-208ENST00000460808 PRIM1P49642 420 aaKnown RBP16.28■□□□□ 0.2
TGFA-208ENST00000460808 LRRC4BQ9NT99 713 aa16.27■□□□□ 0.2
TGFA-208ENST00000460808 TUBGCP6Q96RT7 1819 aa16.26■□□□□ 0.19
TGFA-208ENST00000460808 TAF1LQ8IZX4 1826 aa16.25■□□□□ 0.19
TGFA-208ENST00000460808 MTHFSP49914 203 aa16.25■□□□□ 0.19
TGFA-208ENST00000460808 CC2D1BQ5T0F9 858 aaKnown RBP16.25■□□□□ 0.19
TGFA-208ENST00000460808 NBPF14Q5TI25 921 aa16.24■□□□□ 0.19
TGFA-208ENST00000460808 AEBP1Q8IUX7 1158 aa16.24■□□□□ 0.19
TGFA-208ENST00000460808 COL24A1Q17RW2 1714 aa16.23■□□□□ 0.19
TGFA-208ENST00000460808 PHKG2P15735 406 aa16.23■□□□□ 0.19
TGFA-208ENST00000460808 PDGFDQ9GZP0 370 aaPredicted RBP16.23■□□□□ 0.19
TGFA-208ENST00000460808 SPG7Q9UQ90 795 aa16.23■□□□□ 0.19
TGFA-208ENST00000460808 SLC15A2Q16348 729 aa16.22■□□□□ 0.19
TGFA-208ENST00000460808 ADAMTS7Q9UKP4 1686 aa16.21■□□□□ 0.19
TGFA-208ENST00000460808 SLC27A3Q5K4L6 730 aa16.21■□□□□ 0.19
TGFA-208ENST00000460808 AKT1S1Q96B36 256 aa16.21■□□□□ 0.19
TGFA-208ENST00000460808 C5P01031 1676 aa16.21■□□□□ 0.18
TGFA-208ENST00000460808 KDM6AO15550 1401 aaPredicted RBP16.2■□□□□ 0.18
TGFA-208ENST00000460808 ZNF827Q17R98 1081 aa16.2■□□□□ 0.18
TGFA-208ENST00000460808 IFNL2Q8IZJ0 200 aa16.2■□□□□ 0.18
TGFA-208ENST00000460808 SYTL4Q96C24 671 aaPredicted RBP16.2■□□□□ 0.18
TGFA-208ENST00000460808 SCN11AQ9UI33 1791 aa16.2■□□□□ 0.18
TGFA-208ENST00000460808 VIRMAQ69YN4 1812 aaKnown RBP16.19■□□□□ 0.18
TGFA-208ENST00000460808 ZNF831Q5JPB2 1677 aa16.19■□□□□ 0.18
TGFA-208ENST00000460808 SULT6B1Q6IMI4 303 aa16.18■□□□□ 0.18
TGFA-208ENST00000460808 PIGBQ92521 554 aa16.18■□□□□ 0.18
TGFA-208ENST00000460808 KCNQ4P56696 695 aa16.16■□□□□ 0.18
TGFA-208ENST00000460808 AMOTQ4VCS5 1084 aa16.16■□□□□ 0.18
TGFA-208ENST00000460808 MPRIPQ6WCQ1 1025 aa16.16■□□□□ 0.18
TGFA-208ENST00000460808 SGIP1Q9BQI5 828 aa16.16■□□□□ 0.18
TGFA-208ENST00000460808 STK32BQ9NY57 414 aa16.16■□□□□ 0.18
TGFA-208ENST00000460808 PALLDQ8WX93 1383 aa16.15■□□□□ 0.18
TGFA-208ENST00000460808 DIAPH1O60610 1272 aaKnown RBP16.15■□□□□ 0.18
TGFA-208ENST00000460808 PLEKHO1Q53GL0 409 aaPredicted RBP16.15■□□□□ 0.18
TGFA-208ENST00000460808 UBR3Q6ZT12 1888 aa16.14■□□□□ 0.17
TGFA-208ENST00000460808 C4BP0C0L5 1744 aa16.14■□□□□ 0.17
TGFA-208ENST00000460808 PPP2R1AP30153 589 aa16.14■□□□□ 0.17
TGFA-208ENST00000460808 PTGER2P43116 358 aa16.14■□□□□ 0.17
TGFA-208ENST00000460808 DCAF5Q96JK2 942 aa16.14■□□□□ 0.17
TGFA-208ENST00000460808 CICQ96RK0 1608 aaPredicted RBP16.14■□□□□ 0.17
TGFA-208ENST00000460808 MRC1P22897 1456 aa16.14■□□□□ 0.17
TGFA-208ENST00000460808 ERVV-2B6SEH9 535 aa16.13■□□□□ 0.17
TGFA-208ENST00000460808 CCNL1Q9UK58 526 aaPredicted RBP16.13■□□□□ 0.17
TGFA-208ENST00000460808 COL5A3P25940 1745 aaPredicted RBP16.13■□□□□ 0.17
TGFA-208ENST00000460808 PNPLA7Q6ZV29 1317 aa16.13■□□□□ 0.17
TGFA-208ENST00000460808 ZNF530Q6P9A1 599 aaPredicted RBP16.12■□□□□ 0.17
TGFA-208ENST00000460808 SPON1Q9HCB6 807 aa16.12■□□□□ 0.17
TGFA-208ENST00000460808 ASAP1Q9ULH1 1129 aa16.12■□□□□ 0.17
TGFA-208ENST00000460808 HSP90AB1P08238 724 aaKnown RBP16.11■□□□□ 0.17
TGFA-208ENST00000460808 HMOX1P09601 288 aa16.11■□□□□ 0.17
TGFA-208ENST00000460808 SMARCC1Q92922 1105 aaPredicted RBP16.11■□□□□ 0.17
TGFA-208ENST00000460808 ATG3Q9NT62 314 aa16.11■□□□□ 0.17
TGFA-208ENST00000460808 SLC4A9Q96Q91 983 aa16.1■□□□□ 0.17
TGFA-208ENST00000460808 TMOD3Q9NYL9 352 aa16.1■□□□□ 0.17
TGFA-208ENST00000460808 SIPA1L3O60292 1781 aaPredicted RBP16.1■□□□□ 0.17
TGFA-208ENST00000460808 ZBTB7AO95365 584 aa16.09■□□□□ 0.17
TGFA-208ENST00000460808 MTHFSDQ2M296 383 aaKnown RBP16.09■□□□□ 0.17
TGFA-208ENST00000460808 MTFR1LQ9H019 292 aa16.09■□□□□ 0.17
TGFA-208ENST00000460808 MYH14Q7Z406 1995 aaKnown RBP16.08■□□□□ 0.16
TGFA-208ENST00000460808 LOC102724428A0A0B4J2F2 783 aa16.08■□□□□ 0.16
TGFA-208ENST00000460808 SIK1P57059 783 aa16.08■□□□□ 0.16
TGFA-208ENST00000460808 AKAP4Q5JQC9 854 aa16.08■□□□□ 0.16
TGFA-208ENST00000460808 AMIGO3Q86WK7 504 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms