RNA–Protein interactions for RNA: ENST00000460790.1

CSDC2-202, Transcript of cold shock domain containing C2, humanhuman

TSL 3

Gene CSDC2, Length 721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-202ENST00000460790 NRAPQ86VF7 1730 aa14.27□□□□□ -0.13
CSDC2-202ENST00000460790 IL16Q14005 1332 aa14.26□□□□□ -0.13
CSDC2-202ENST00000460790 E9PSI1 815 aa14.26□□□□□ -0.13
CSDC2-202ENST00000460790 HTATSF1O43719 755 aaKnown RBP14.26□□□□□ -0.13
CSDC2-202ENST00000460790 SPINK5Q9NQ38 1064 aaPredicted RBP14.26□□□□□ -0.13
CSDC2-202ENST00000460790 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.26□□□□□ -0.13
CSDC2-202ENST00000460790 LRP6O75581 1613 aa14.26□□□□□ -0.13
CSDC2-202ENST00000460790 DUSP27Q5VZP5 1158 aa14.25□□□□□ -0.13
CSDC2-202ENST00000460790 FNBP4Q8N3X1 1017 aaPredicted RBP14.25□□□□□ -0.13
CSDC2-202ENST00000460790 NGLY1Q96IV0 654 aa14.25□□□□□ -0.13
CSDC2-202ENST00000460790 GNAT3A8MTJ3 354 aa14.24□□□□□ -0.13
CSDC2-202ENST00000460790 CALD1Q05682 793 aaKnown RBP14.24□□□□□ -0.13
CSDC2-202ENST00000460790 UNC5CLQ8IV45 518 aa14.24□□□□□ -0.13
CSDC2-202ENST00000460790 C8orf37Q96NL8 207 aa14.24□□□□□ -0.13
CSDC2-202ENST00000460790 MEGF6O75095 1541 aa14.24□□□□□ -0.13
CSDC2-202ENST00000460790 VIRMAQ69YN4 1812 aaKnown RBP14.23□□□□□ -0.13
CSDC2-202ENST00000460790 IL2RBP14784 551 aa14.23□□□□□ -0.13
CSDC2-202ENST00000460790 DCTN1Q14203 1278 aa14.23□□□□□ -0.13
CSDC2-202ENST00000460790 AKAP4Q5JQC9 854 aa14.23□□□□□ -0.13
CSDC2-202ENST00000460790 ZNF530Q6P9A1 599 aaPredicted RBP14.23□□□□□ -0.13
CSDC2-202ENST00000460790 RTF1Q92541 710 aaKnown RBP14.23□□□□□ -0.13
CSDC2-202ENST00000460790 THUMPD2Q9BTF0 503 aaKnown RBP14.23□□□□□ -0.13
CSDC2-202ENST00000460790 SPG7Q9UQ90 795 aa14.23□□□□□ -0.13
CSDC2-202ENST00000460790 PARP4Q9UKK3 1724 aaKnown RBP14.23□□□□□ -0.13
CSDC2-202ENST00000460790 MAP3K5Q99683 1374 aa14.22□□□□□ -0.13
CSDC2-202ENST00000460790 PKD1L3Q7Z443 1732 aa14.22□□□□□ -0.13
CSDC2-202ENST00000460790 MCM10Q7L590 875 aa14.22□□□□□ -0.13
CSDC2-202ENST00000460790 FBXO41Q8TF61 875 aa14.22□□□□□ -0.13
CSDC2-202ENST00000460790 USP35Q9P2H5 1018 aa14.22□□□□□ -0.13
CSDC2-202ENST00000460790 BCL9LQ86UU0 1499 aa14.22□□□□□ -0.13
CSDC2-202ENST00000460790 OVOS2A0A0G2JMS6 1433 aa14.22□□□□□ -0.13
CSDC2-202ENST00000460790 ZNF853P0CG23 659 aa14.21□□□□□ -0.13
CSDC2-202ENST00000460790 MEX3CQ5U5Q3 659 aaKnown RBP14.21□□□□□ -0.13
CSDC2-202ENST00000460790 IL17REQ8NFR9 667 aa14.21□□□□□ -0.13
CSDC2-202ENST00000460790 MYH16Q9H6N6 1097 aa14.21□□□□□ -0.13
CSDC2-202ENST00000460790 THRAP3Q9Y2W1 955 aaKnown RBP14.21□□□□□ -0.13
CSDC2-202ENST00000460790 SPATA31A1Q5TZJ5 1347 aa14.2□□□□□ -0.14
CSDC2-202ENST00000460790 SPATA31A5Q5VU36 1347 aa14.2□□□□□ -0.14
CSDC2-202ENST00000460790 SPATA31A7Q8IWB4 1347 aa14.2□□□□□ -0.14
CSDC2-202ENST00000460790 C1orf141Q5JVX7 400 aa14.2□□□□□ -0.14
CSDC2-202ENST00000460790 ZCRB1Q8TBF4 217 aaKnown RBP14.2□□□□□ -0.14
CSDC2-202ENST00000460790 IFT57Q9NWB7 429 aa14.2□□□□□ -0.14
CSDC2-202ENST00000460790 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.19□□□□□ -0.14
CSDC2-202ENST00000460790 GNAI1P63096 354 aa14.19□□□□□ -0.14
CSDC2-202ENST00000460790 VPS72Q15906 364 aa14.19□□□□□ -0.14
CSDC2-202ENST00000460790 IFNL2Q8IZJ0 200 aa14.19□□□□□ -0.14
CSDC2-202ENST00000460790 CFAP44Q96MT7 982 aa14.19□□□□□ -0.14
CSDC2-202ENST00000460790 USP21Q9UK80 565 aa14.19□□□□□ -0.14
CSDC2-202ENST00000460790 DISP2A7MBM2 1401 aa14.18□□□□□ -0.14
CSDC2-202ENST00000460790 CYP27B1O15528 508 aa14.18□□□□□ -0.14
CSDC2-202ENST00000460790 RNMTO43148 476 aaKnown RBP14.18□□□□□ -0.14
CSDC2-202ENST00000460790 PHKG2P15735 406 aa14.18□□□□□ -0.14
CSDC2-202ENST00000460790 CDCA7Q9BWT1 371 aaPredicted RBP14.18□□□□□ -0.14
CSDC2-202ENST00000460790 LGR6Q9HBX8 967 aa14.18□□□□□ -0.14
CSDC2-202ENST00000460790 CEMIPQ8WUJ3 1361 aa14.18□□□□□ -0.14
CSDC2-202ENST00000460790 WNK3Q9BYP7 1800 aa14.18□□□□□ -0.14
CSDC2-202ENST00000460790 SCN11AQ9UI33 1791 aa14.17□□□□□ -0.14
CSDC2-202ENST00000460790 CHL1O00533 1208 aa14.17□□□□□ -0.14
CSDC2-202ENST00000460790 MPRIPQ6WCQ1 1025 aa14.17□□□□□ -0.14
CSDC2-202ENST00000460790 BARGINQ6ZT62 677 aa14.17□□□□□ -0.14
CSDC2-202ENST00000460790 LAS1LQ9Y4W2 734 aaKnown RBP14.17□□□□□ -0.14
CSDC2-202ENST00000460790 SHANK3Q9BYB0 1731 aa14.17□□□□□ -0.14
CSDC2-202ENST00000460790 ADAMTS7Q9UKP4 1686 aa14.17□□□□□ -0.14
CSDC2-202ENST00000460790 FANCIQ9NVI1 1328 aa14.16□□□□□ -0.14
CSDC2-202ENST00000460790 HSP90AB1P08238 724 aaKnown RBP14.16□□□□□ -0.14
CSDC2-202ENST00000460790 TAF7Q15545 349 aaPredicted RBP14.16□□□□□ -0.14
CSDC2-202ENST00000460790 TSR2Q969E8 191 aaKnown RBP14.16□□□□□ -0.14
CSDC2-202ENST00000460790 CCDC9Q9Y3X0 531 aaKnown RBP14.16□□□□□ -0.14
CSDC2-202ENST00000460790 AFF2P51816 1311 aa14.15□□□□□ -0.14
CSDC2-202ENST00000460790 PCDH11XQ9BZA7 1347 aa14.15□□□□□ -0.14
CSDC2-202ENST00000460790 PCDH11YQ9BZA8 1340 aa14.15□□□□□ -0.14
CSDC2-202ENST00000460790 LRRC37A3O60309 1634 aa14.15□□□□□ -0.14
CSDC2-202ENST00000460790 NKX1-1Q15270 411 aaPredicted RBP14.15□□□□□ -0.14
CSDC2-202ENST00000460790 DCAF5Q96JK2 942 aa14.15□□□□□ -0.14
CSDC2-202ENST00000460790 MBIPQ9NS73 344 aa14.15□□□□□ -0.14
CSDC2-202ENST00000460790 BABAM1Q9NWV8 329 aa14.15□□□□□ -0.14
CSDC2-202ENST00000460790 EXOC5O00471 708 aa14.14□□□□□ -0.15
CSDC2-202ENST00000460790 RCAN3Q9UKA8 241 aa14.14□□□□□ -0.15
CSDC2-202ENST00000460790 KAT6BQ8WYB5 2073 aa14.14□□□□□ -0.15
CSDC2-202ENST00000460790 CT47B1P0C2W7 299 aaPredicted RBP14.13□□□□□ -0.15
CSDC2-202ENST00000460790 EXOSC9Q06265 439 aaKnown RBP14.13□□□□□ -0.15
CSDC2-202ENST00000460790 DDX54Q8TDD1 881 aaKnown RBP14.13□□□□□ -0.15
CSDC2-202ENST00000460790 SUPT16HQ9Y5B9 1047 aaKnown RBP14.13□□□□□ -0.15
CSDC2-202ENST00000460790 SIPA1L3O60292 1781 aaPredicted RBP14.13□□□□□ -0.15
CSDC2-202ENST00000460790 TEFQ10587 303 aa14.12□□□□□ -0.15
CSDC2-202ENST00000460790 MIS18AQ9NYP9 233 aa14.12□□□□□ -0.15
CSDC2-202ENST00000460790 TRPC5Q9UL62 973 aaPredicted RBP14.12□□□□□ -0.15
CSDC2-202ENST00000460790 KDM6AO15550 1401 aaPredicted RBP14.12□□□□□ -0.15
CSDC2-202ENST00000460790 ATRNO75882 1429 aa14.11□□□□□ -0.15
CSDC2-202ENST00000460790 GJD4Q96KN9 370 aaPredicted RBP14.11□□□□□ -0.15
CSDC2-202ENST00000460790 TSPYL4Q9UJ04 414 aa14.11□□□□□ -0.15
CSDC2-202ENST00000460790 ERVV-2B6SEH9 535 aa14.1□□□□□ -0.15
CSDC2-202ENST00000460790 DDB1Q16531 1140 aa14.1□□□□□ -0.15
CSDC2-202ENST00000460790 FAM98CQ17RN3 349 aaKnown RBP14.1□□□□□ -0.15
CSDC2-202ENST00000460790 QTRT2Q9H974 415 aaKnown RBP14.1□□□□□ -0.15
CSDC2-202ENST00000460790 SLC52A2Q9HAB3 445 aa14.1□□□□□ -0.15
CSDC2-202ENST00000460790 TNS2Q63HR2 1409 aa14.09□□□□□ -0.15
CSDC2-202ENST00000460790 BTBD11A6QL63 1104 aa14.09□□□□□ -0.15
CSDC2-202ENST00000460790 ONECUT3O60422 494 aaPredicted RBP14.09□□□□□ -0.15
CSDC2-202ENST00000460790 NFATC2IPQ8NCF5 419 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms