RNA–Protein interactions for RNA: ENST00000460628.1

PSMD2-209, Transcript of proteasome 26S subunit, non-ATPase 2, human

TSL 2

Gene PSMD2, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD2-209	ENST00000460628	EIF4G2	P78344	907 aa	Known RBP eCLIP	12.94	□□□□□ -0.34
PSMD2-209	ENST00000460628	RAPGEF4	Q8WZA2	1011 aa		12.94	□□□□□ -0.34
PSMD2-209	ENST00000460628	SYTL4	Q96C24	671 aa	Predicted RBP	12.94	□□□□□ -0.34
PSMD2-209	ENST00000460628	HSPA5	P11021	654 aa	Known RBP	12.93	□□□□□ -0.34
PSMD2-209	ENST00000460628	PRIM1	P49642	420 aa	Known RBP	12.93	□□□□□ -0.34
PSMD2-209	ENST00000460628	NSD2	O96028	1365 aa		12.93	□□□□□ -0.34
PSMD2-209	ENST00000460628	PPM1G	O15355	546 aa	Predicted RBP	12.92	□□□□□ -0.34
PSMD2-209	ENST00000460628	ZNF827	Q17R98	1081 aa		12.92	□□□□□ -0.34
PSMD2-209	ENST00000460628	LRRC4B	Q9NT99	713 aa		12.92	□□□□□ -0.34
PSMD2-209	ENST00000460628	CASZ1	Q86V15	1759 aa		12.92	□□□□□ -0.34
PSMD2-209	ENST00000460628	PAPPA	Q13219	1627 aa		12.91	□□□□□ -0.34
PSMD2-209	ENST00000460628	TAT	P17735	454 aa	Predicted RBP	12.91	□□□□□ -0.34
PSMD2-209	ENST00000460628	PTGER2	P43116	358 aa		12.91	□□□□□ -0.34
PSMD2-209	ENST00000460628	PCDH11X	Q9BZA7	1347 aa		12.9	□□□□□ -0.34
PSMD2-209	ENST00000460628	PCDH11Y	Q9BZA8	1340 aa		12.9	□□□□□ -0.34
PSMD2-209	ENST00000460628	KIF20B	Q96Q89	1820 aa		12.9	□□□□□ -0.34
PSMD2-209	ENST00000460628	SLC27A3	Q5K4L6	730 aa		12.9	□□□□□ -0.34
PSMD2-209	ENST00000460628	MTFR1L	Q9H019	292 aa		12.9	□□□□□ -0.34
PSMD2-209	ENST00000460628	ATF5	Q9Y2D1	282 aa	Predicted RBP	12.9	□□□□□ -0.34
PSMD2-209	ENST00000460628	WASHC2A	Q641Q2	1341 aa		12.88	□□□□□ -0.35
PSMD2-209	ENST00000460628	NCAPD2	Q15021	1401 aa		12.88	□□□□□ -0.35
PSMD2-209	ENST00000460628	BTAF1	O14981	1849 aa		12.88	□□□□□ -0.35
PSMD2-209	ENST00000460628	KCNQ4	P56696	695 aa		12.88	□□□□□ -0.35
PSMD2-209	ENST00000460628	POLK	Q9UBT6	870 aa		12.88	□□□□□ -0.35
PSMD2-209	ENST00000460628	TNNT2	P45379	298 aa	Predicted RBP	12.87	□□□□□ -0.35
PSMD2-209	ENST00000460628	AKT1S1	Q96B36	256 aa		12.87	□□□□□ -0.35
PSMD2-209	ENST00000460628	PANK3	Q9H999	370 aa		12.87	□□□□□ -0.35
PSMD2-209	ENST00000460628	DOT1L	Q8TEK3	1739 aa		12.86	□□□□□ -0.35
PSMD2-209	ENST00000460628	SHANK3	Q9BYB0	1731 aa		12.86	□□□□□ -0.35
PSMD2-209	ENST00000460628	CYP27B1	O15528	508 aa		12.86	□□□□□ -0.35
PSMD2-209	ENST00000460628	SGIP1	Q9BQI5	828 aa		12.86	□□□□□ -0.35
PSMD2-209	ENST00000460628	CCNL1	Q9UK58	526 aa	Predicted RBP	12.86	□□□□□ -0.35
PSMD2-209	ENST00000460628	EYA1	Q99502	592 aa		12.85	□□□□□ -0.35
PSMD2-209	ENST00000460628	PNPLA7	Q6ZV29	1317 aa		12.85	□□□□□ -0.35
PSMD2-209	ENST00000460628	RGPD2	P0DJD1	1756 aa		12.84	□□□□□ -0.35
PSMD2-209	ENST00000460628	EIF4A2	Q14240	407 aa	Known RBP	12.84	□□□□□ -0.35
PSMD2-209	ENST00000460628	FHDC1	Q9C0D6	1143 aa	Predicted RBP	12.84	□□□□□ -0.35
PSMD2-209	ENST00000460628	TFCP2L1	Q9NZI6	479 aa		12.84	□□□□□ -0.35
PSMD2-209	ENST00000460628	ANKRD26	Q9UPS8	1709 aa		12.84	□□□□□ -0.35
PSMD2-209	ENST00000460628	PALLD	Q8WX93	1383 aa		12.83	□□□□□ -0.36
PSMD2-209	ENST00000460628	DCAF8L1	A6NGE4	600 aa		12.83	□□□□□ -0.36
PSMD2-209	ENST00000460628	MPRIP	Q6WCQ1	1025 aa		12.83	□□□□□ -0.36
PSMD2-209	ENST00000460628	SPG7	Q9UQ90	795 aa		12.83	□□□□□ -0.36
PSMD2-209	ENST00000460628	SLC16A10	Q8TF71	515 aa		12.82	□□□□□ -0.36
PSMD2-209	ENST00000460628	ARX	Q96QS3	562 aa		12.82	□□□□□ -0.36
PSMD2-209	ENST00000460628	SYT17	Q9BSW7	474 aa		12.82	□□□□□ -0.36
PSMD2-209	ENST00000460628	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	12.82	□□□□□ -0.36	4e-7	■□□□□ 9.1
PSMD2-209	ENST00000460628	NKX1-1	Q15270	411 aa	Predicted RBP	12.81	□□□□□ -0.36
PSMD2-209	ENST00000460628	IGSF1	Q8N6C5	1336 aa		12.81	□□□□□ -0.36
PSMD2-209	ENST00000460628	YY1	P25490	414 aa		12.8	□□□□□ -0.36
PSMD2-209	ENST00000460628	MORC1	Q86VD1	984 aa		12.8	□□□□□ -0.36
PSMD2-209	ENST00000460628	KNSTRN	Q9Y448	316 aa		12.8	□□□□□ -0.36
PSMD2-209	ENST00000460628	KIF7	Q2M1P5	1343 aa		12.8	□□□□□ -0.36
PSMD2-209	ENST00000460628	MAP3K5	Q99683	1374 aa		12.8	□□□□□ -0.36
PSMD2-209	ENST00000460628	PLEKHG2	Q9H7P9	1386 aa		12.8	□□□□□ -0.36
PSMD2-209	ENST00000460628	PKD1L3	Q7Z443	1732 aa		12.79	□□□□□ -0.36
PSMD2-209	ENST00000460628	PHKG2	P15735	406 aa		12.79	□□□□□ -0.36
PSMD2-209	ENST00000460628	POLD1	P28340	1107 aa		12.79	□□□□□ -0.36
PSMD2-209	ENST00000460628	PIGB	Q92521	554 aa		12.79	□□□□□ -0.36
PSMD2-209	ENST00000460628	SMARCC1	Q92922	1105 aa	Predicted RBP	12.79	□□□□□ -0.36
PSMD2-209	ENST00000460628	IFNL2	Q8IZJ0	200 aa		12.78	□□□□□ -0.36
PSMD2-209	ENST00000460628	TMOD3	Q9NYL9	352 aa		12.78	□□□□□ -0.36
PSMD2-209	ENST00000460628	UTRN	P46939	3433 aa		12.78	□□□□□ -0.36
PSMD2-209	ENST00000460628	LY75	O60449	1722 aa		12.78	□□□□□ -0.36
PSMD2-209	ENST00000460628	TOGARAM1	Q9Y4F4	1720 aa		12.77	□□□□□ -0.36
PSMD2-209	ENST00000460628	MSH5	O43196	834 aa		12.77	□□□□□ -0.37
PSMD2-209	ENST00000460628	AMER1	Q5JTC6	1135 aa	Predicted RBP	12.77	□□□□□ -0.37
PSMD2-209	ENST00000460628	COL23A1	Q86Y22	540 aa	Predicted RBP	12.77	□□□□□ -0.37
PSMD2-209	ENST00000460628	KLHL34	Q8N239	644 aa		12.77	□□□□□ -0.37
PSMD2-209	ENST00000460628	HMGB2	P26583	209 aa	Known RBP	12.76	□□□□□ -0.37
PSMD2-209	ENST00000460628	AEBP1	Q8IUX7	1158 aa		12.76	□□□□□ -0.37
PSMD2-209	ENST00000460628	LOC102724428	A0A0B4J2F2	783 aa		12.75	□□□□□ -0.37
PSMD2-209	ENST00000460628	SIK1	P57059	783 aa		12.75	□□□□□ -0.37
PSMD2-209	ENST00000460628	MSL1	Q68DK7	614 aa		12.75	□□□□□ -0.37
PSMD2-209	ENST00000460628	AK7	Q96M32	723 aa		12.75	□□□□□ -0.37
PSMD2-209	ENST00000460628	AMIGO3	Q86WK7	504 aa		12.74	□□□□□ -0.37
PSMD2-209	ENST00000460628	LINC00116	Q8NCU8	138 aa		12.74	□□□□□ -0.37
PSMD2-209	ENST00000460628	FLAD1	Q8NFF5	587 aa		12.74	□□□□□ -0.37
PSMD2-209	ENST00000460628	ASAP1	Q9ULH1	1129 aa		12.74	□□□□□ -0.37
PSMD2-209	ENST00000460628	QSER1	Q2KHR3	1735 aa		12.74	□□□□□ -0.37
PSMD2-209	ENST00000460628	KDM6A	O15550	1401 aa	Predicted RBP	12.73	□□□□□ -0.37
PSMD2-209	ENST00000460628	HSP90AB1	P08238	724 aa	Known RBP	12.73	□□□□□ -0.37
PSMD2-209	ENST00000460628	PLEKHO1	Q53GL0	409 aa	Predicted RBP	12.73	□□□□□ -0.37
PSMD2-209	ENST00000460628	ZNF530	Q6P9A1	599 aa	Predicted RBP	12.73	□□□□□ -0.37
PSMD2-209	ENST00000460628	KDR	P35968	1356 aa		12.72	□□□□□ -0.37
PSMD2-209	ENST00000460628	PHF14	O94880	888 aa		12.72	□□□□□ -0.37
PSMD2-209	ENST00000460628	IL13	P35225	146 aa		12.72	□□□□□ -0.37
PSMD2-209	ENST00000460628	ITPK1	Q13572	414 aa		12.72	□□□□□ -0.37
PSMD2-209	ENST00000460628	AMOT	Q4VCS5	1084 aa		12.72	□□□□□ -0.37
PSMD2-209	ENST00000460628	SULT6B1	Q6IMI4	303 aa		12.72	□□□□□ -0.37
PSMD2-209	ENST00000460628	NLGN2	Q8NFZ4	835 aa		12.72	□□□□□ -0.37
PSMD2-209	ENST00000460628	DCAF5	Q96JK2	942 aa		12.72	□□□□□ -0.37
PSMD2-209	ENST00000460628	ATG3	Q9NT62	314 aa		12.72	□□□□□ -0.37
PSMD2-209	ENST00000460628	C5	P01031	1676 aa		12.72	□□□□□ -0.37
PSMD2-209	ENST00000460628	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	12.71	□□□□□ -0.37
PSMD2-209	ENST00000460628	ERVV-2	B6SEH9	535 aa		12.71	□□□□□ -0.37
PSMD2-209	ENST00000460628	SMIM5	Q71RC9	77 aa		12.71	□□□□□ -0.37
PSMD2-209	ENST00000460628	TUBGCP6	Q96RT7	1819 aa		12.71	□□□□□ -0.38
PSMD2-209	ENST00000460628	GOLGB1	Q14789	3259 aa	Known RBP	12.71	□□□□□ -0.38
PSMD2-209	ENST00000460628	KAT6B	Q8WYB5	2073 aa		12.71	□□□□□ -0.38

Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms